RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 COPS6Q7L5N1 327 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 TNRQ92752 1358 aa12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 MAGEB6P1A0A0J9YX57 407 aa12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 C6orf163Q5TEZ5 329 aa12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 IQCGQ9H095 443 aaKnown RBP12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 GJA3Q9Y6H8 435 aa12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 MICALCLQ6ZW33 695 aa12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 RRP36Q96EU6 259 aaKnown RBP12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 PLB1Q6P1J6 1458 aa12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 BACH1O14867 736 aa12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 RRAGBQ5VZM2 374 aa12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 NSD2O96028 1365 aa12.05□□□□□ -0.48
SRGAP3-207ENST00000485983 RIMBP2O15034 1052 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 DPH6Q7L8W6 267 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 ZSCAN16Q9H4T2 348 aaPredicted RBP12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 CEP83Q9Y592 693 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 KIAA0586Q9BVV6 1533 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 GNAT2P19087 354 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 LRRC59Q96AG4 307 aaKnown RBP12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 JADE2Q9NQC1 790 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 FAM13AO94988 1023 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 SPECC1LQ69YQ0 1117 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 TMC6Q7Z403 805 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 GPHNQ9NQX3 736 aaPredicted RBP12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 ANXA1P04083 346 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 CALML3P27482 149 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 SLC9C2Q5TAH2 1124 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 KRT79Q5XKE5 535 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 HS2ST1Q7LGA3 356 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 CCDC155Q8N6L0 562 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 RBM17Q96I25 401 aaKnown RBP12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 ADGRF5Q8IZF2 1346 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 LMBR1LQ6UX01 489 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 ALG1Q9BT22 464 aa12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.04□□□□□ -0.48
SRGAP3-207ENST00000485983 TIAM1Q13009 1591 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 CKAP4Q07065 602 aaKnown RBP12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 TRAPPC3LQ5T215 181 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 PICK1Q9NRD5 415 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 SYKP43405 635 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 SPAG1Q07617 926 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 MAATS1Q7Z4T9 603 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 LARP6Q9BRS8 491 aaKnown RBP12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 TMOD4Q9NZQ9 345 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 ARHGEF11O15085 1522 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 FAM135AQ9P2D6 1515 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 A0A1W2PRG0 241 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 ALDH1L1O75891 902 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 LDHBP07195 334 aaKnown RBP12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 KIAA1524Q8TCG1 905 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 MCM9Q9NXL9 1143 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 PSMA7O14818 248 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 ASIC1P78348 528 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 TTC6Q86TZ1 520 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 IL27Q8NEV9 243 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 RHPN1Q8TCX5 695 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 IVNS1ABPQ9Y6Y0 642 aa12.03□□□□□ -0.48
SRGAP3-207ENST00000485983 ATP2A1O14983 1001 aa12.02□□□□□ -0.48
SRGAP3-207ENST00000485983 BRF1Q92994 677 aa12.02□□□□□ -0.48
SRGAP3-207ENST00000485983 CTAGE1Q96RT6 745 aa12.02□□□□□ -0.48
SRGAP3-207ENST00000485983 CAVIN2O95810 425 aa12.02□□□□□ -0.48
SRGAP3-207ENST00000485983 CYLC1P35663 651 aaPredicted RBP12.02□□□□□ -0.48
SRGAP3-207ENST00000485983 CCDC77Q9BR77 488 aa12.02□□□□□ -0.48
SRGAP3-207ENST00000485983 SELENOOQ9BVL4 669 aa12.02□□□□□ -0.48
SRGAP3-207ENST00000485983 ZNF408Q9H9D4 720 aa12.02□□□□□ -0.48
SRGAP3-207ENST00000485983 CHPF2Q9P2E5 772 aa12.02□□□□□ -0.48
SRGAP3-207ENST00000485983 ABCA10Q8WWZ4 1543 aa12.02□□□□□ -0.49
SRGAP3-207ENST00000485983 SLC39A6Q13433 755 aa12.02□□□□□ -0.49
SRGAP3-207ENST00000485983 CEP112Q8N8E3 955 aa12.02□□□□□ -0.49
SRGAP3-207ENST00000485983 TNPO1Q92973 898 aaKnown RBP12.02□□□□□ -0.49
SRGAP3-207ENST00000485983 EEF2P13639 858 aaKnown RBP12.02□□□□□ -0.49
SRGAP3-207ENST00000485983 RNF187Q5TA31 235 aaPredicted RBP12.02□□□□□ -0.49
SRGAP3-207ENST00000485983 GRM8O00222 908 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 AFMP43652 599 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 SNX16P57768 344 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 HOOK2Q96ED9 719 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 MBIPQ9NS73 344 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 RASAL2Q9UJF2 1139 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 GNA11P29992 359 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 MCMDC2Q4G0Z9 681 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 ISM2Q6H9L7 571 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 SUPT6HQ7KZ85 1726 aaKnown RBP12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 GIMAP7Q8NHV1 300 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 TRMT1Q9NXH9 659 aaKnown RBP12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 RTL9Q8NET4 1388 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 TRIM27P14373 513 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 EIF6P56537 245 aaKnown RBP12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 PLCB3Q01970 1234 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 KSR2Q6VAB6 950 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 PUS7Q96PZ0 661 aaKnown RBP12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 TMX1Q9H3N1 280 aa12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 NKTRP30414 1462 aaKnown RBP12.01□□□□□ -0.49
SRGAP3-207ENST00000485983 ESPNB1AK53 854 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 IRS4O14654 1257 aaPredicted RBP12□□□□□ -0.49
SRGAP3-207ENST00000485983 KCNG4Q8TDN1 519 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms