RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 ADD1P35611 737 aaKnown RBP26.5■■□□□ 1.83
CLN5-202ENST00000485938 PDCL2Q8N4E4 241 aa26.5■■□□□ 1.83
CLN5-202ENST00000485938 HAUS7Q99871 368 aa26.5■■□□□ 1.83
CLN5-202ENST00000485938 SLC52A2Q9HAB3 445 aa26.5■■□□□ 1.83
CLN5-202ENST00000485938 CDC25BP30305 580 aa26.5■■□□□ 1.83
CLN5-202ENST00000485938 RABL6Q3YEC7 729 aaPredicted RBP26.5■■□□□ 1.83
CLN5-202ENST00000485938 LRP10Q7Z4F1 713 aa26.5■■□□□ 1.83
CLN5-202ENST00000485938 DNAJC2Q99543 621 aaKnown RBP26.5■■□□□ 1.83
CLN5-202ENST00000485938 LLPHQ9BRT6 129 aaKnown RBP26.5■■□□□ 1.83
CLN5-202ENST00000485938 PRDM10Q9NQV6 1147 aa26.5■■□□□ 1.83
CLN5-202ENST00000485938 KDM6AO15550 1401 aaPredicted RBP26.5■■□□□ 1.83
CLN5-202ENST00000485938 ANKRD13DQ6ZTN6 518 aa26.49■■□□□ 1.83
CLN5-202ENST00000485938 DBNDD2Q9BQY9 259 aa26.49■■□□□ 1.83
CLN5-202ENST00000485938 CLIP2Q9UDT6 1046 aa26.49■■□□□ 1.83
CLN5-202ENST00000485938 PFKFB2O60825 505 aa26.49■■□□□ 1.83
CLN5-202ENST00000485938 ATP2B3Q16720 1220 aa26.49■■□□□ 1.83
CLN5-202ENST00000485938 STOX1Q6ZVD7 989 aa26.49■■□□□ 1.83
CLN5-202ENST00000485938 ORAI2Q96SN7 254 aa26.49■■□□□ 1.83
CLN5-202ENST00000485938 SCN11AQ9UI33 1791 aa26.48■■□□□ 1.83
CLN5-202ENST00000485938 IQCB1Q15051 598 aa26.48■■□□□ 1.83
CLN5-202ENST00000485938 LRRC2Q9BYS8 371 aa26.48■■□□□ 1.83
CLN5-202ENST00000485938 CACTINQ8WUQ7 758 aaKnown RBP26.48■■□□□ 1.83
CLN5-202ENST00000485938 C16orf45Q96MC5 204 aaPredicted RBP26.48■■□□□ 1.83
CLN5-202ENST00000485938 MYH15Q9Y2K3 1946 aa26.47■■□□□ 1.83
CLN5-202ENST00000485938 CCDC144BQ3MJ40 725 aa26.47■■□□□ 1.83
CLN5-202ENST00000485938 NAA16Q6N069 864 aaPredicted RBP26.47■■□□□ 1.83
CLN5-202ENST00000485938 CCDC144CPQ8IYA2 1237 aa26.47■■□□□ 1.83
CLN5-202ENST00000485938 NSUN7Q8NE18 718 aaKnown RBP26.47■■□□□ 1.83
CLN5-202ENST00000485938 RCOR1Q9UKL0 485 aa26.47■■□□□ 1.83
CLN5-202ENST00000485938 LMOD2Q6P5Q4 547 aa26.47■■□□□ 1.83
CLN5-202ENST00000485938 SARM1Q6SZW1 724 aa26.47■■□□□ 1.83
CLN5-202ENST00000485938 DDX46Q7L014 1031 aaKnown RBP26.47■■□□□ 1.83
CLN5-202ENST00000485938 UBE3BQ7Z3V4 1068 aa26.47■■□□□ 1.83
CLN5-202ENST00000485938 ZNF496Q96IT1 587 aaPredicted RBP26.47■■□□□ 1.83
CLN5-202ENST00000485938 RGPD5Q99666 1765 aa26.46■■□□□ 1.83
CLN5-202ENST00000485938 NFATC2IPQ8NCF5 419 aa26.46■■□□□ 1.83
CLN5-202ENST00000485938 SH3TC1Q8TE82 1336 aa26.46■■□□□ 1.83
CLN5-202ENST00000485938 LAMA4Q16363 1823 aa26.46■■□□□ 1.83
CLN5-202ENST00000485938 SMTNL1A8MU46 457 aa26.45■■□□□ 1.83
CLN5-202ENST00000485938 ZSCAN20P17040 1043 aaPredicted RBP26.45■■□□□ 1.83
CLN5-202ENST00000485938 CBX1P83916 185 aa26.45■■□□□ 1.83
CLN5-202ENST00000485938 CEBPZQ03701 1054 aaKnown RBP26.45■■□□□ 1.83
CLN5-202ENST00000485938 ERBB3P21860 1342 aa26.45■■□□□ 1.83
CLN5-202ENST00000485938 AFDNP55196 1824 aaKnown RBP26.45■■□□□ 1.82
CLN5-202ENST00000485938 CTDNEP1O95476 244 aa26.45■■□□□ 1.82
CLN5-202ENST00000485938 HMGB1P09429 215 aaKnown RBP26.45■■□□□ 1.82
CLN5-202ENST00000485938 C11orf57Q6ZUT1 292 aaPredicted RBP26.45■■□□□ 1.82
CLN5-202ENST00000485938 KBTBD3Q8NAB2 608 aa26.45■■□□□ 1.82
CLN5-202ENST00000485938 CTAGE5O15320 804 aa26.44■■□□□ 1.82
CLN5-202ENST00000485938 FGD1P98174 961 aa26.44■■□□□ 1.82
CLN5-202ENST00000485938 DHX32Q7L7V1 743 aaKnown RBP26.44■■□□□ 1.82
CLN5-202ENST00000485938 CCAR1Q8IX12 1150 aaKnown RBP26.44■■□□□ 1.82
CLN5-202ENST00000485938 TNNT1P13805 278 aa26.43■■□□□ 1.82
CLN5-202ENST00000485938 STX1AQ16623 288 aa26.43■■□□□ 1.82
CLN5-202ENST00000485938 FTOQ9C0B1 505 aaKnown RBP eCLIP26.43■■□□□ 1.82
CLN5-202ENST00000485938 GOLPH3LQ9H4A5 285 aa26.43■■□□□ 1.82
CLN5-202ENST00000485938 USP16Q9Y5T5 823 aa26.43■■□□□ 1.82
CLN5-202ENST00000485938 GOLGA6L19H0YKK7 550 aa26.43■■□□□ 1.82
CLN5-202ENST00000485938 DMTNQ08495 405 aa26.43■■□□□ 1.82
CLN5-202ENST00000485938 NCBP1Q09161 790 aaKnown RBP26.43■■□□□ 1.82
CLN5-202ENST00000485938 PTPDC1A2A3K4 754 aa26.42■■□□□ 1.82
CLN5-202ENST00000485938 PHKG2P15735 406 aa26.42■■□□□ 1.82
CLN5-202ENST00000485938 PIP4K2AP48426 406 aaPredicted RBP26.42■■□□□ 1.82
CLN5-202ENST00000485938 SNW1Q13573 536 aaKnown RBP26.42■■□□□ 1.82
CLN5-202ENST00000485938 SYCP1Q15431 976 aa26.42■■□□□ 1.82
CLN5-202ENST00000485938 UTP14CQ5TAP6 766 aaKnown RBP26.42■■□□□ 1.82
CLN5-202ENST00000485938 RAPGEF4Q8WZA2 1011 aa26.42■■□□□ 1.82
CLN5-202ENST00000485938 MRFAP1L1Q96HT8 127 aa26.42■■□□□ 1.82
CLN5-202ENST00000485938 TRPM3Q9HCF6 1732 aaPredicted RBP26.42■■□□□ 1.82
CLN5-202ENST00000485938 PALLDQ8WX93 1383 aa26.42■■□□□ 1.82
CLN5-202ENST00000485938 AGXT2Q9BYV1 514 aa26.42■■□□□ 1.82
CLN5-202ENST00000485938 EXOSC10Q01780 885 aaKnown RBP26.41■■□□□ 1.82
CLN5-202ENST00000485938 APOBRQ0VD83 1088 aa26.41■■□□□ 1.82
CLN5-202ENST00000485938 A0A087WZG4 1122 aa26.4■■□□□ 1.82
CLN5-202ENST00000485938 SNRPA1P09661 255 aaKnown RBP26.4■■□□□ 1.82
CLN5-202ENST00000485938 FOSBP53539 338 aa26.4■■□□□ 1.82
CLN5-202ENST00000485938 CASP7P55210 303 aa26.4■■□□□ 1.82
CLN5-202ENST00000485938 PAXBP1Q9Y5B6 917 aa26.4■■□□□ 1.82
CLN5-202ENST00000485938 ARFGEF2Q9Y6D5 1785 aa26.4■■□□□ 1.82
CLN5-202ENST00000485938 ATL3Q6DD88 541 aa26.4■■□□□ 1.82
CLN5-202ENST00000485938 LRRC8AQ8IWT6 810 aa26.4■■□□□ 1.82
CLN5-202ENST00000485938 USP28Q96RU2 1077 aa26.4■■□□□ 1.82
CLN5-202ENST00000485938 SALL1Q9NSC2 1324 aa26.4■■□□□ 1.82
CLN5-202ENST00000485938 ATP5J2-PTCD1G3V325 749 aa26.39■■□□□ 1.82
CLN5-202ENST00000485938 PTCD1O75127 700 aaKnown RBP26.39■■□□□ 1.82
CLN5-202ENST00000485938 ENGASEQ8NFI3 743 aa26.39■■□□□ 1.82
CLN5-202ENST00000485938 DSCC1Q9BVC3 393 aa26.39■■□□□ 1.82
CLN5-202ENST00000485938 HELLSQ9NRZ9 838 aa26.39■■□□□ 1.82
CLN5-202ENST00000485938 TPD52L1Q16890 204 aaPredicted RBP26.39■■□□□ 1.81
CLN5-202ENST00000485938 CCDC73Q6ZRK6 1079 aa26.39■■□□□ 1.81
CLN5-202ENST00000485938 NEMFO60524 1076 aa26.38■■□□□ 1.81
CLN5-202ENST00000485938 U2AF2P26368 475 aaKnown RBP eCLIP26.38■■□□□ 1.81
CLN5-202ENST00000485938 FAM160A1Q05DH4 1040 aa26.38■■□□□ 1.81
CLN5-202ENST00000485938 SLFNL1Q499Z3 407 aa26.38■■□□□ 1.81
CLN5-202ENST00000485938 ZNF396Q96N95 335 aaPredicted RBP26.38■■□□□ 1.81
CLN5-202ENST00000485938 RBM6P78332 1123 aaKnown RBP26.37■■□□□ 1.81
CLN5-202ENST00000485938 CCT2P78371 535 aaKnown RBP26.37■■□□□ 1.81
CLN5-202ENST00000485938 LMBR1LQ6UX01 489 aa26.37■■□□□ 1.81
CLN5-202ENST00000485938 DHX40Q8IX18 779 aaKnown RBP26.37■■□□□ 1.81
CLN5-202ENST00000485938 PAG1Q9NWQ8 432 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms