RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 DDX21Q9NR30 783 aaKnown RBP eCLIP8.36□□□□□ -1.07
SORT1-206ENST00000485149 COL15A1P39059 1388 aa8.35□□□□□ -1.07
SORT1-206ENST00000485149 GRXCR2A6NFK2 248 aa8.35□□□□□ -1.07
SORT1-206ENST00000485149 OSBPP22059 807 aa8.35□□□□□ -1.07
SORT1-206ENST00000485149 MMRN1Q13201 1228 aa8.35□□□□□ -1.07
SORT1-206ENST00000485149 GRM1Q13255 1194 aa8.35□□□□□ -1.07
SORT1-206ENST00000485149 CDCA8Q53HL2 280 aa8.35□□□□□ -1.07
SORT1-206ENST00000485149 SND1Q7KZF4 910 aaKnown RBP eCLIP8.35□□□□□ -1.073e-6■■■■□ 23.1
SORT1-206ENST00000485149 PARP9Q8IXQ6 854 aa8.35□□□□□ -1.07
SORT1-206ENST00000485149 CNKSR1Q969H4 720 aa8.35□□□□□ -1.07
SORT1-206ENST00000485149 SPATA32Q96LK8 384 aa8.35□□□□□ -1.07
SORT1-206ENST00000485149 BRIP1Q9BX63 1249 aa8.35□□□□□ -1.07
SORT1-206ENST00000485149 COL11A2P13942 1736 aaPredicted RBP8.34□□□□□ -1.07
SORT1-206ENST00000485149 ANKRD31Q8N7Z5 1873 aa8.34□□□□□ -1.07
SORT1-206ENST00000485149 MAP3K7O43318 606 aa8.34□□□□□ -1.07
SORT1-206ENST00000485149 HRO43593 1189 aa8.34□□□□□ -1.07
SORT1-206ENST00000485149 CLSTN1O94985 981 aa8.34□□□□□ -1.07
SORT1-206ENST00000485149 PANK3Q9H999 370 aa8.34□□□□□ -1.07
SORT1-206ENST00000485149 VPS9D1Q9Y2B5 631 aa8.34□□□□□ -1.07
SORT1-206ENST00000485149 TLL2Q9Y6L7 1015 aa8.34□□□□□ -1.07
SORT1-206ENST00000485149 ARFGEF2Q9Y6D5 1785 aa8.34□□□□□ -1.07
SORT1-206ENST00000485149 RNF123Q5XPI4 1314 aa8.33□□□□□ -1.08
SORT1-206ENST00000485149 ZNF541Q9H0D2 1346 aa8.33□□□□□ -1.08
SORT1-206ENST00000485149 AOC2O75106 756 aa8.33□□□□□ -1.08
SORT1-206ENST00000485149 KDM4AO75164 1064 aa8.33□□□□□ -1.08
SORT1-206ENST00000485149 MLLT3P42568 568 aaPredicted RBP8.33□□□□□ -1.08
SORT1-206ENST00000485149 MTHFSP49914 203 aa8.33□□□□□ -1.08
SORT1-206ENST00000485149 SOX10P56693 466 aa8.33□□□□□ -1.08
SORT1-206ENST00000485149 CNGB1Q14028 1251 aaPredicted RBP8.33□□□□□ -1.08
SORT1-206ENST00000485149 PLEKHO1Q53GL0 409 aaPredicted RBP8.33□□□□□ -1.08
SORT1-206ENST00000485149 STYK1Q6J9G0 422 aa8.33□□□□□ -1.08
SORT1-206ENST00000485149 PRPF40BQ6NWY9 871 aaKnown RBP8.33□□□□□ -1.08
SORT1-206ENST00000485149 DNAJC10Q8IXB1 793 aa8.33□□□□□ -1.08
SORT1-206ENST00000485149 NFATC2IPQ8NCF5 419 aa8.33□□□□□ -1.08
SORT1-206ENST00000485149 GCC1Q96CN9 775 aa8.33□□□□□ -1.08
SORT1-206ENST00000485149 IVNS1ABPQ9Y6Y0 642 aa8.33□□□□□ -1.08
SORT1-206ENST00000485149 NEFLP07196 543 aa8.32□□□□□ -1.08
SORT1-206ENST00000485149 CYP19A1P11511 503 aaPredicted RBP8.32□□□□□ -1.08
SORT1-206ENST00000485149 AMOTQ4VCS5 1084 aa8.32□□□□□ -1.08
SORT1-206ENST00000485149 CCDC93Q567U6 631 aa8.32□□□□□ -1.08
SORT1-206ENST00000485149 PRR5LQ6MZQ0 368 aa8.32□□□□□ -1.08
SORT1-206ENST00000485149 ZNF530Q6P9A1 599 aaPredicted RBP8.32□□□□□ -1.08
SORT1-206ENST00000485149 BICDL1Q6ZP65 573 aa8.32□□□□□ -1.08
SORT1-206ENST00000485149 ANKRD13AQ8IZ07 590 aa8.32□□□□□ -1.08
SORT1-206ENST00000485149 GPC2Q8N158 579 aa8.32□□□□□ -1.08
SORT1-206ENST00000485149 SRGNP10124 158 aa8.31□□□□□ -1.08
SORT1-206ENST00000485149 TNNT2P45379 298 aaPredicted RBP8.31□□□□□ -1.08
SORT1-206ENST00000485149 FKBP4Q02790 459 aaKnown RBP eCLIP8.31□□□□□ -1.08
SORT1-206ENST00000485149 C1orf141Q5JVX7 400 aa8.31□□□□□ -1.08
SORT1-206ENST00000485149 CST9Q5W186 159 aa8.31□□□□□ -1.08
SORT1-206ENST00000485149 MASTLQ96GX5 879 aa8.31□□□□□ -1.08
SORT1-206ENST00000485149 HHIPL1Q96JK4 782 aa8.31□□□□□ -1.08
SORT1-206ENST00000485149 RBM27Q9P2N5 1060 aaKnown RBP8.31□□□□□ -1.08
SORT1-206ENST00000485149 ZBTB1Q9Y2K1 713 aa8.31□□□□□ -1.08
SORT1-206ENST00000485149 ZNF330Q9Y3S2 320 aaPredicted RBP8.31□□□□□ -1.08
SORT1-206ENST00000485149 CASP8AP2Q9UKL3 1982 aa8.31□□□□□ -1.08
SORT1-206ENST00000485149 SLX4Q8IY92 1834 aa8.31□□□□□ -1.08
SORT1-206ENST00000485149 KIF7Q2M1P5 1343 aa8.3□□□□□ -1.08
SORT1-206ENST00000485149 CACNA1SQ13698 1873 aa8.3□□□□□ -1.08
SORT1-206ENST00000485149 TRPM7Q96QT4 1865 aa8.3□□□□□ -1.08
SORT1-206ENST00000485149 A0A087WZG4 1122 aa8.3□□□□□ -1.08
SORT1-206ENST00000485149 RBM47A0AV96 593 aaKnown RBP8.3□□□□□ -1.08
SORT1-206ENST00000485149 BHMG1C9JSJ3 638 aaPredicted RBP8.3□□□□□ -1.08
SORT1-206ENST00000485149 FZD9O00144 591 aa8.3□□□□□ -1.08
SORT1-206ENST00000485149 COL9A1P20849 921 aa8.3□□□□□ -1.08
SORT1-206ENST00000485149 LMOD1P29536 600 aaPredicted RBP8.3□□□□□ -1.08
SORT1-206ENST00000485149 EIF4A2Q14240 407 aaKnown RBP8.3□□□□□ -1.08
SORT1-206ENST00000485149 TMED8Q6PL24 325 aaPredicted RBP8.3□□□□□ -1.08
SORT1-206ENST00000485149 SAPCD2Q86UD0 394 aa8.3□□□□□ -1.08
SORT1-206ENST00000485149 NBPF3Q9H094 633 aa8.3□□□□□ -1.08
SORT1-206ENST00000485149 RABGEF1Q9UJ41 708 aa8.3□□□□□ -1.08
SORT1-206ENST00000485149 SCN7AQ01118 1682 aa8.3□□□□□ -1.08
SORT1-206ENST00000485149 NPHP1O15259 732 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 NCLP19338 710 aaKnown RBP8.29□□□□□ -1.08
SORT1-206ENST00000485149 ST5P78524 1137 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 FMR1Q06787 632 aaKnown RBP eCLIP8.29□□□□□ -1.08
SORT1-206ENST00000485149 AMHR2Q16671 573 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 TBC1D9BQ66K14 1250 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 CIAPIN1Q6FI81 312 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 RTKN2Q8IZC4 609 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 CCDC24Q8N4L8 307 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 NBPF15Q8N660 670 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 CNBD1Q8NA66 436 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 C7orf43Q8WVR3 580 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 DRC1Q96MC2 740 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 ZNF277Q9NRM2 450 aaPredicted RBP8.29□□□□□ -1.08
SORT1-206ENST00000485149 KIAA1522Q9P206 1035 aaPredicted RBP8.29□□□□□ -1.08
SORT1-206ENST00000485149 POLKQ9UBT6 870 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 COG6Q9Y2V7 657 aa8.29□□□□□ -1.08
SORT1-206ENST00000485149 IARSP41252 1262 aaKnown RBP8.28□□□□□ -1.08
SORT1-206ENST00000485149 EIF5P55010 431 aaKnown RBP8.28□□□□□ -1.08
SORT1-206ENST00000485149 TSR1Q2NL82 804 aaKnown RBP8.28□□□□□ -1.08
SORT1-206ENST00000485149 USP50Q70EL3 339 aaPredicted RBP8.28□□□□□ -1.08
SORT1-206ENST00000485149 SLC17A8Q8NDX2 589 aa8.28□□□□□ -1.08
SORT1-206ENST00000485149 RNF166Q96A37 237 aaPredicted RBP8.28□□□□□ -1.08
SORT1-206ENST00000485149 BCORQ6W2J9 1755 aa8.27□□□□□ -1.08
SORT1-206ENST00000485149 SCN11AQ9UI33 1791 aa8.27□□□□□ -1.08
SORT1-206ENST00000485149 TRIM6-TRIM34B2RNG4 842 aa8.27□□□□□ -1.09
SORT1-206ENST00000485149 TRAF5O00463 557 aa8.27□□□□□ -1.09
SORT1-206ENST00000485149 EIF6P56537 245 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms