RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 NSUN5Q96P11 429 aaKnown RBP11.89□□□□□ -0.51
UBR3-210ENST00000484596 NACC1Q96RE7 527 aa11.89□□□□□ -0.51
UBR3-210ENST00000484596 KRTAP4-6Q9BYQ5 205 aa11.89□□□□□ -0.51
UBR3-210ENST00000484596 ELNP15502 786 aa11.88□□□□□ -0.51
UBR3-210ENST00000484596 EIF2AK2P19525 551 aaKnown RBP11.88□□□□□ -0.51
UBR3-210ENST00000484596 TRIM26Q12899 539 aaPredicted RBP11.88□□□□□ -0.51
UBR3-210ENST00000484596 SELPP16109 830 aa11.87□□□□□ -0.51
UBR3-210ENST00000484596 SOX18P35713 384 aa11.87□□□□□ -0.51
UBR3-210ENST00000484596 TXNDC2Q86VQ3 553 aa11.87□□□□□ -0.51
UBR3-210ENST00000484596 HOXD8P13378 290 aaPredicted RBP11.86□□□□□ -0.51
UBR3-210ENST00000484596 FMR1NBQ8N0W7 255 aaPredicted RBP11.86□□□□□ -0.51
UBR3-210ENST00000484596 PLD4Q96BZ4 506 aa11.86□□□□□ -0.51
UBR3-210ENST00000484596 C9orf172C9J069 976 aa11.85□□□□□ -0.51
UBR3-210ENST00000484596 SHISA2Q6UWI4 295 aa11.85□□□□□ -0.51
UBR3-210ENST00000484596 WFDC8Q8IUA0 241 aa11.85□□□□□ -0.51
UBR3-210ENST00000484596 FNDC3AQ9Y2H6 1198 aaKnown RBP11.85□□□□□ -0.51
UBR3-210ENST00000484596 ATCAYQ86WG3 371 aa11.84□□□□□ -0.51
UBR3-210ENST00000484596 HELQQ8TDG4 1101 aa11.84□□□□□ -0.51
UBR3-210ENST00000484596 IVNS1ABPQ9Y6Y0 642 aa11.84□□□□□ -0.51
UBR3-210ENST00000484596 GHRHP01286 108 aa11.83□□□□□ -0.52
UBR3-210ENST00000484596 OR13H1Q8NG92 308 aa11.83□□□□□ -0.52
UBR3-210ENST00000484596 DTWD1Q8N5C7 304 aa11.82□□□□□ -0.52
UBR3-210ENST00000484596 LENG1Q96BZ8 264 aaPredicted RBP11.82□□□□□ -0.52
UBR3-210ENST00000484596 ADGRE1Q14246 886 aa11.81□□□□□ -0.52
UBR3-210ENST00000484596 COL13A1Q5TAT6 717 aaPredicted RBP11.81□□□□□ -0.52
UBR3-210ENST00000484596 TTC39BQ5VTQ0 682 aaPredicted RBP11.81□□□□□ -0.52
UBR3-210ENST00000484596 FBXO11Q86XK2 927 aa11.81□□□□□ -0.52
UBR3-210ENST00000484596 GTF3C2Q8WUA4 911 aaPredicted RBP11.81□□□□□ -0.52
UBR3-210ENST00000484596 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
UBR3-210ENST00000484596 TPSG1Q9NRR2 321 aa11.81□□□□□ -0.52
UBR3-210ENST00000484596 MBTPS1Q14703 1052 aa11.8□□□□□ -0.52
UBR3-210ENST00000484596 GDF6Q6KF10 455 aaPredicted RBP11.8□□□□□ -0.52
UBR3-210ENST00000484596 RBSNQ9H1K0 784 aa11.8□□□□□ -0.52
UBR3-210ENST00000484596 EGFL7Q9UHF1 273 aa11.8□□□□□ -0.52
UBR3-210ENST00000484596 SEMA6BQ9H3T3 888 aa11.79□□□□□ -0.52
UBR3-210ENST00000484596 NRG1Q02297 640 aaPredicted RBP11.78□□□□□ -0.52
UBR3-210ENST00000484596 ABI2Q9NYB9 513 aaPredicted RBP11.78□□□□□ -0.52
UBR3-210ENST00000484596 USP21Q9UK80 565 aa11.78□□□□□ -0.52
UBR3-210ENST00000484596 DEAF1O75398 565 aaPredicted RBP11.77□□□□□ -0.53
UBR3-210ENST00000484596 HYAL2Q12891 473 aa11.77□□□□□ -0.53
UBR3-210ENST00000484596 MTMR3Q13615 1198 aa11.77□□□□□ -0.53
UBR3-210ENST00000484596 RSPO4Q2I0M5 234 aaPredicted RBP11.77□□□□□ -0.53
UBR3-210ENST00000484596 NOM1Q5C9Z4 860 aaKnown RBP11.77□□□□□ -0.53
UBR3-210ENST00000484596 EDEM1Q92611 657 aa11.77□□□□□ -0.53
UBR3-210ENST00000484596 GZF1Q9H116 711 aaPredicted RBP11.77□□□□□ -0.53
UBR3-210ENST00000484596 ELP3Q9H9T3 547 aa11.77□□□□□ -0.53
UBR3-210ENST00000484596 TMEM63CQ9P1W3 806 aa11.77□□□□□ -0.53
UBR3-210ENST00000484596 TRIM33Q9UPN9 1127 aa11.77□□□□□ -0.53
UBR3-210ENST00000484596 ABL1P00519 1130 aa11.76□□□□□ -0.53
UBR3-210ENST00000484596 CYP2E1P05181 493 aaPredicted RBP11.76□□□□□ -0.53
UBR3-210ENST00000484596 MPSTP25325 297 aa11.76□□□□□ -0.53
UBR3-210ENST00000484596 ITGB7P26010 798 aa11.76□□□□□ -0.53
UBR3-210ENST00000484596 DNM1Q05193 864 aaKnown RBP11.76□□□□□ -0.53
UBR3-210ENST00000484596 SF3B2Q13435 895 aaKnown RBP11.76□□□□□ -0.53
UBR3-210ENST00000484596 NKAPLQ5M9Q1 402 aa11.76□□□□□ -0.53
UBR3-210ENST00000484596 TXNRD3Q86VQ6 643 aa11.76□□□□□ -0.53
UBR3-210ENST00000484596 IL22RA1Q8N6P7 574 aa11.76□□□□□ -0.53
UBR3-210ENST00000484596 EIF1AXP47813 144 aaKnown RBP11.75□□□□□ -0.53
UBR3-210ENST00000484596 SERPINB4P48594 390 aa11.75□□□□□ -0.53
UBR3-210ENST00000484596 PDE12Q6L8Q7 609 aaKnown RBP11.75□□□□□ -0.53
UBR3-210ENST00000484596 ATP11AP98196 1134 aa11.74□□□□□ -0.53
UBR3-210ENST00000484596 FKBP4Q02790 459 aaKnown RBP eCLIP11.74□□□□□ -0.53
UBR3-210ENST00000484596 ZNF438Q7Z4V0 828 aa11.74□□□□□ -0.53
UBR3-210ENST00000484596 SPACA7Q96KW9 195 aa11.74□□□□□ -0.53
UBR3-210ENST00000484596 GGNBP2Q9H3C7 697 aa11.74□□□□□ -0.53
UBR3-210ENST00000484596 PDGFAP04085 211 aa11.73□□□□□ -0.53
UBR3-210ENST00000484596 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
UBR3-210ENST00000484596 IGF2-ASQ6U949 168 aa11.73□□□□□ -0.53
UBR3-210ENST00000484596 CNTN3Q9P232 1028 aa11.73□□□□□ -0.53
UBR3-210ENST00000484596 SOWAHDA6NJG2 315 aa11.72□□□□□ -0.53
UBR3-210ENST00000484596 KIF4AO95239 1232 aa11.72□□□□□ -0.53
UBR3-210ENST00000484596 SND1Q7KZF4 910 aaKnown RBP eCLIP11.72□□□□□ -0.53
UBR3-210ENST00000484596 A6NHS1 94 aa11.71□□□□□ -0.53
UBR3-210ENST00000484596 DLL1O00548 723 aa11.71□□□□□ -0.53
UBR3-210ENST00000484596 ICMTO60725 284 aa11.71□□□□□ -0.53
UBR3-210ENST00000484596 PCSK2P16519 638 aa11.71□□□□□ -0.53
UBR3-210ENST00000484596 MZF1P28698 734 aaPredicted RBP11.71□□□□□ -0.53
UBR3-210ENST00000484596 C8orf34Q49A92 452 aa11.71□□□□□ -0.53
UBR3-210ENST00000484596 CEP135Q66GS9 1140 aa11.71□□□□□ -0.53
UBR3-210ENST00000484596 XKR5Q6UX68 686 aa11.71□□□□□ -0.53
UBR3-210ENST00000484596 RASSF4Q9H2L5 321 aa11.71□□□□□ -0.53
UBR3-210ENST00000484596 NPR3P17342 541 aa11.7□□□□□ -0.54
UBR3-210ENST00000484596 TMCO4Q5TGY1 634 aa11.7□□□□□ -0.54
UBR3-210ENST00000484596 NCAPG2Q86XI2 1143 aa11.7□□□□□ -0.54
UBR3-210ENST00000484596 GLYCTKQ8IVS8 523 aa11.7□□□□□ -0.54
UBR3-210ENST00000484596 CEP120Q8N960 986 aa11.7□□□□□ -0.54
UBR3-210ENST00000484596 PODXL2Q9NZ53 605 aa11.7□□□□□ -0.54
UBR3-210ENST00000484596 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.7□□□□□ -0.54
UBR3-210ENST00000484596 FAM13AO94988 1023 aa11.69□□□□□ -0.54
UBR3-210ENST00000484596 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
UBR3-210ENST00000484596 SETDB1Q15047 1291 aa11.69□□□□□ -0.54
UBR3-210ENST00000484596 ALKBH2Q6NS38 261 aa11.69□□□□□ -0.54
UBR3-210ENST00000484596 CACTIN-AS1Q8N1I8 211 aa11.69□□□□□ -0.54
UBR3-210ENST00000484596 WFDC12Q8WWY7 111 aa11.69□□□□□ -0.54
UBR3-210ENST00000484596 LACRTQ9GZZ8 138 aa11.69□□□□□ -0.54
UBR3-210ENST00000484596 KANSL3Q9P2N6 904 aa11.69□□□□□ -0.54
UBR3-210ENST00000484596 POLIQ9UNA4 740 aa11.69□□□□□ -0.54
UBR3-210ENST00000484596 H3BRB1 525 aa11.68□□□□□ -0.54
UBR3-210ENST00000484596 DYRK3O43781 588 aa11.68□□□□□ -0.54
UBR3-210ENST00000484596 SMNDC1O75940 238 aaKnown RBP eCLIP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms