RNA–Protein interactions for RNA: ENST00000484594.5

ERBB4-209, Transcript of erb-b2 receptor tyrosine kinase 4, human

TSL 1 (best)

Gene ERBB4, Length 2,680 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB4-209	ENST00000484594	MYH13	Q9UKX3	1938 aa		13.26	□□□□□ -0.29
ERBB4-209	ENST00000484594	ANP32A	P39687	249 aa	Known RBP	13.26	□□□□□ -0.29
ERBB4-209	ENST00000484594	NFIX	Q14938	502 aa		13.26	□□□□□ -0.29
ERBB4-209	ENST00000484594	TBC1D9	Q6ZT07	1266 aa		13.26	□□□□□ -0.29
ERBB4-209	ENST00000484594	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.26	□□□□□ -0.29
ERBB4-209	ENST00000484594	APBB1	O00213	710 aa		13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	RBM25	P49756	843 aa	Known RBP	13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	ERFE	Q4G0M1	354 aa		13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	CNBD1	Q8NA66	436 aa		13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	RUFY2	Q8WXA3	655 aa		13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	SIL1	Q9H173	461 aa		13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	SNRK	Q9NRH2	765 aa		13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	SRP68	Q9UHB9	627 aa	Known RBP	13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	PDE8B	O95263	885 aa		13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	GTF2E1	P29083	439 aa	Predicted RBP	13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	PUM3	Q15397	648 aa	Known RBP	13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	CRY2	Q49AN0	593 aa		13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	IL17RA	Q96F46	866 aa		13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	TBC1D32	Q96NH3	1257 aa		13.25	□□□□□ -0.29
ERBB4-209	ENST00000484594	ANKRD18A	Q8IVF6	992 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	SLC16A10	Q8TF71	515 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	LPIN2	Q92539	896 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	JARID2	Q92833	1246 aa	Predicted RBP	13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	MPHOSPH8	Q99549	860 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	HAUS7	Q99871	368 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	CNNM1	Q9NRU3	951 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	TFCP2L1	Q9NZI6	479 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	PDS5A	Q29RF7	1337 aa	Known RBP	13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	UQCRFS1P1	P0C7P4	283 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	FGFR2	P21802	821 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	KCNQ4	P56696	695 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	NUTM1	Q86Y26	1132 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	ANKRD2	Q9GZV1	360 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	STK32B	Q9NY57	414 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	DBNL	Q9UJU6	430 aa	Known RBP	13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	LTBP1	Q14766	1721 aa		13.24	□□□□□ -0.29
ERBB4-209	ENST00000484594	MAST2	Q6P0Q8	1798 aa		13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	CCDC158	Q5M9N0	1113 aa		13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	PNPLA7	Q6ZV29	1317 aa		13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594		A0A1B0GUL7	405 aa		13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	POLRMT	O00411	1230 aa	Known RBP	13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	HOXA10	P31260	410 aa	Predicted RBP	13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	UBE4A	Q14139	1066 aa		13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	SLC15A2	Q16348	729 aa		13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	ZNF827	Q17R98	1081 aa		13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	LRRC24	Q50LG9	513 aa		13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	METTL24	Q5JXM2	366 aa		13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	AMIGO3	Q86WK7	504 aa		13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	KLHDC4	Q8TBB5	520 aa		13.23	□□□□□ -0.29
ERBB4-209	ENST00000484594	HCLS1	P14317	486 aa	Predicted RBP	13.22	□□□□□ -0.29
ERBB4-209	ENST00000484594	ATP2B3	Q16720	1220 aa		13.22	□□□□□ -0.29
ERBB4-209	ENST00000484594	PHF14	O94880	888 aa		13.22	□□□□□ -0.29
ERBB4-209	ENST00000484594	SLC5A1	P13866	664 aa		13.22	□□□□□ -0.29
ERBB4-209	ENST00000484594	CHML	P26374	656 aa		13.22	□□□□□ -0.29
ERBB4-209	ENST00000484594	CRAMP1	Q96RY5	1269 aa		13.22	□□□□□ -0.29
ERBB4-209	ENST00000484594	SERPINB2	P05120	415 aa		13.21	□□□□□ -0.29
ERBB4-209	ENST00000484594	PRR5L	Q6MZQ0	368 aa		13.21	□□□□□ -0.29
ERBB4-209	ENST00000484594	DDX46	Q7L014	1031 aa	Known RBP	13.21	□□□□□ -0.29
ERBB4-209	ENST00000484594	SYNE4	Q8N205	404 aa		13.21	□□□□□ -0.29
ERBB4-209	ENST00000484594	ARID4A	P29374	1257 aa	Predicted RBP	13.21	□□□□□ -0.3
ERBB4-209	ENST00000484594	C15orf52	Q6ZUT6	534 aa	Known RBP	13.21	□□□□□ -0.3
ERBB4-209	ENST00000484594	BRIP1	Q9BX63	1249 aa		13.21	□□□□□ -0.3
ERBB4-209	ENST00000484594	SEMA3E	O15041	775 aa		13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	IFIT1	P09914	478 aa	Known RBP	13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	GRAP	Q13588	217 aa		13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	TTF1	Q15361	905 aa	Predicted RBP	13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	COL23A1	Q86Y22	540 aa	Predicted RBP	13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	GRAPL	Q8TC17	118 aa	Predicted RBP	13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	ZNF594	Q96JF6	807 aa	Predicted RBP	13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	ESYT1	Q9BSJ8	1104 aa		13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	COL11A2	P13942	1736 aa	Predicted RBP	13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	TRIM6-TRIM34	B2RNG4	842 aa		13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	ZFY	P08048	801 aa	Predicted RBP	13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	ANAPC15	P60006	121 aa		13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	RBM17	Q96I25	401 aa	Known RBP	13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	PUS3	Q9BZE2	481 aa	Known RBP	13.2	□□□□□ -0.3
ERBB4-209	ENST00000484594	RPS8	P62241	208 aa	Known RBP	13.19	□□□□□ -0.3
ERBB4-209	ENST00000484594	C22orf23	Q9BZE7	217 aa		13.19	□□□□□ -0.3
ERBB4-209	ENST00000484594	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.19	□□□□□ -0.3
ERBB4-209	ENST00000484594	BBOX1	O75936	387 aa		13.19	□□□□□ -0.3
ERBB4-209	ENST00000484594	XAGE2	Q96GT9	111 aa		13.19	□□□□□ -0.3
ERBB4-209	ENST00000484594	DBNDD2	Q9BQY9	259 aa		13.19	□□□□□ -0.3
ERBB4-209	ENST00000484594	PDE6B	P35913	854 aa		13.18	□□□□□ -0.3
ERBB4-209	ENST00000484594	KBTBD3	Q8NAB2	608 aa		13.18	□□□□□ -0.3
ERBB4-209	ENST00000484594	TAF1	P21675	1872 aa		13.18	□□□□□ -0.3
ERBB4-209	ENST00000484594	CCDC88A	Q3V6T2	1871 aa		13.18	□□□□□ -0.3
ERBB4-209	ENST00000484594	ZNF804B	A4D1E1	1349 aa		13.18	□□□□□ -0.3
ERBB4-209	ENST00000484594	MCC	P23508	829 aa		13.18	□□□□□ -0.3
ERBB4-209	ENST00000484594	MFAP1	P55081	439 aa	Known RBP	13.18	□□□□□ -0.3
ERBB4-209	ENST00000484594	ZSCAN25	Q6NSZ9	544 aa		13.18	□□□□□ -0.3
ERBB4-209	ENST00000484594	LEMD3	Q9Y2U8	911 aa		13.18	□□□□□ -0.3
ERBB4-209	ENST00000484594	PARP3	Q9Y6F1	533 aa		13.18	□□□□□ -0.3
ERBB4-209	ENST00000484594	SGSM2	O43147	1006 aa		13.17	□□□□□ -0.3
ERBB4-209	ENST00000484594	GRIPAP1	Q4V328	841 aa		13.17	□□□□□ -0.3
ERBB4-209	ENST00000484594	TTC39A	Q5SRH9	613 aa		13.17	□□□□□ -0.3
ERBB4-209	ENST00000484594	BICDL1	Q6ZP65	573 aa		13.17	□□□□□ -0.3
ERBB4-209	ENST00000484594	RILPL2	Q969X0	211 aa		13.17	□□□□□ -0.3
ERBB4-209	ENST00000484594	TLR7	Q9NYK1	1049 aa	Known RBP	13.17	□□□□□ -0.3
ERBB4-209	ENST00000484594	NPHP1	O15259	732 aa		13.17	□□□□□ -0.3
ERBB4-209	ENST00000484594	CHRND	Q07001	517 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms