RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 LPIN2Q92539 896 aa16.28■□□□□ 0.2
RXRB-205ENST00000483821 IPO9Q96P70 1041 aaKnown RBP16.28■□□□□ 0.2
RXRB-205ENST00000483821 CAMKK2Q96RR4 588 aa16.28■□□□□ 0.2
RXRB-205ENST00000483821 BOLA2Q9H3K6 86 aa16.28■□□□□ 0.2
RXRB-205ENST00000483821 DIAPH3Q9NSV4 1193 aa16.28■□□□□ 0.2
RXRB-205ENST00000483821 BSDC1Q9NW68 430 aaPredicted RBP16.28■□□□□ 0.2
RXRB-205ENST00000483821 STK32BQ9NY57 414 aa16.28■□□□□ 0.2
RXRB-205ENST00000483821 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.28■□□□□ 0.2
RXRB-205ENST00000483821 LAMB2P55268 1798 aa16.28■□□□□ 0.2
RXRB-205ENST00000483821 ZNF609O15014 1411 aa16.28■□□□□ 0.2
RXRB-205ENST00000483821 ABCC12Q96J65 1359 aa16.27■□□□□ 0.2
RXRB-205ENST00000483821 SERPINB2P05120 415 aa16.27■□□□□ 0.2
RXRB-205ENST00000483821 SLC5A1P13866 664 aa16.27■□□□□ 0.2
RXRB-205ENST00000483821 ZNF827Q17R98 1081 aa16.27■□□□□ 0.2
RXRB-205ENST00000483821 XAGE2Q96GT9 111 aa16.27■□□□□ 0.2
RXRB-205ENST00000483821 HAUS7Q99871 368 aa16.27■□□□□ 0.2
RXRB-205ENST00000483821 ESYT1Q9BSJ8 1104 aa16.27■□□□□ 0.2
RXRB-205ENST00000483821 SEC31BQ9NQW1 1179 aa16.27■□□□□ 0.2
RXRB-205ENST00000483821 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
RXRB-205ENST00000483821 C4AP0C0L4 1744 aa16.27■□□□□ 0.19
RXRB-205ENST00000483821 COL24A1Q17RW2 1714 aa16.27■□□□□ 0.19
RXRB-205ENST00000483821 RIC1Q4ADV7 1423 aa16.27■□□□□ 0.19
RXRB-205ENST00000483821 MAP4K4O95819 1239 aaPredicted RBP16.26■□□□□ 0.19
RXRB-205ENST00000483821 IFIT1P09914 478 aaKnown RBP16.26■□□□□ 0.19
RXRB-205ENST00000483821 RBM25P49756 843 aaKnown RBP16.26■□□□□ 0.19
RXRB-205ENST00000483821 RPS8P62241 208 aaKnown RBP16.26■□□□□ 0.19
RXRB-205ENST00000483821 TTC39AQ5SRH9 613 aa16.26■□□□□ 0.19
RXRB-205ENST00000483821 COL23A1Q86Y22 540 aaPredicted RBP16.26■□□□□ 0.19
RXRB-205ENST00000483821 ZNF512BQ96KM6 892 aaPredicted RBP16.26■□□□□ 0.19
RXRB-205ENST00000483821 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
RXRB-205ENST00000483821 UQCRFS1P1P0C7P4 283 aa16.25■□□□□ 0.19
RXRB-205ENST00000483821 MCCP23508 829 aa16.25■□□□□ 0.19
RXRB-205ENST00000483821 KIAA1211Q6ZU35 1233 aa16.25■□□□□ 0.19
RXRB-205ENST00000483821 VGLL2Q8N8G2 317 aa16.25■□□□□ 0.19
RXRB-205ENST00000483821 FSD1Q9BTV5 496 aa16.25■□□□□ 0.19
RXRB-205ENST00000483821 ANKRD2Q9GZV1 360 aa16.25■□□□□ 0.19
RXRB-205ENST00000483821 TNS1Q9HBL0 1735 aaKnown RBP16.25■□□□□ 0.19
RXRB-205ENST00000483821 RFX7Q2KHR2 1363 aa16.25■□□□□ 0.19
RXRB-205ENST00000483821 EN1Q05925 392 aaPredicted RBP16.24■□□□□ 0.19
RXRB-205ENST00000483821 BECN1Q14457 450 aa16.24■□□□□ 0.19
RXRB-205ENST00000483821 PRR5LQ6MZQ0 368 aa16.24■□□□□ 0.19
RXRB-205ENST00000483821 USP26Q9BXU7 913 aa16.24■□□□□ 0.19
RXRB-205ENST00000483821 EZH2Q15910 746 aaKnown RBP16.23■□□□□ 0.19
RXRB-205ENST00000483821 SLC15A2Q16348 729 aa16.23■□□□□ 0.19
RXRB-205ENST00000483821 IL27Q8NEV9 243 aa16.23■□□□□ 0.19
RXRB-205ENST00000483821 RPGRQ92834 1020 aaKnown RBP16.23■□□□□ 0.19
RXRB-205ENST00000483821 RBM17Q96I25 401 aaKnown RBP16.23■□□□□ 0.19
RXRB-205ENST00000483821 PARP3Q9Y6F1 533 aa16.23■□□□□ 0.19
RXRB-205ENST00000483821 LRP5O75197 1615 aa16.23■□□□□ 0.19
RXRB-205ENST00000483821 RAD50Q92878 1312 aa16.22■□□□□ 0.19
RXRB-205ENST00000483821 POLRMTO00411 1230 aaKnown RBP16.22■□□□□ 0.19
RXRB-205ENST00000483821 FGFR2P21802 821 aa16.22■□□□□ 0.19
RXRB-205ENST00000483821 CHRNDQ07001 517 aa16.22■□□□□ 0.19
RXRB-205ENST00000483821 UBE4AQ14139 1066 aa16.22■□□□□ 0.19
RXRB-205ENST00000483821 C3orf67Q6ZVT6 689 aa16.22■□□□□ 0.19
RXRB-205ENST00000483821 DNAJC2Q99543 621 aaKnown RBP16.22■□□□□ 0.19
RXRB-205ENST00000483821 PAG1Q9NWQ8 432 aa16.22■□□□□ 0.19
RXRB-205ENST00000483821 SGSM2O43147 1006 aa16.21■□□□□ 0.19
RXRB-205ENST00000483821 TTF1Q15361 905 aaPredicted RBP16.21■□□□□ 0.19
RXRB-205ENST00000483821 KBTBD3Q8NAB2 608 aa16.21■□□□□ 0.19
RXRB-205ENST00000483821 GNL3LQ9NVN8 582 aaKnown RBP16.21■□□□□ 0.19
RXRB-205ENST00000483821 PNPLA7Q6ZV29 1317 aa16.2■□□□□ 0.18
RXRB-205ENST00000483821 ADORA1P30542 326 aa16.2■□□□□ 0.18
RXRB-205ENST00000483821 DDR1Q08345 913 aa16.2■□□□□ 0.18
RXRB-205ENST00000483821 GRAPQ13588 217 aa16.2■□□□□ 0.18
RXRB-205ENST00000483821 CWC27Q6UX04 472 aaKnown RBP16.2■□□□□ 0.18
RXRB-205ENST00000483821 TMC4Q7Z404 712 aa16.2■□□□□ 0.18
RXRB-205ENST00000483821 HELBQ8NG08 1087 aaPredicted RBP16.2■□□□□ 0.18
RXRB-205ENST00000483821 GRAPLQ8TC17 118 aaPredicted RBP16.2■□□□□ 0.18
RXRB-205ENST00000483821 BRIP1Q9BX63 1249 aa16.2■□□□□ 0.18
RXRB-205ENST00000483821 ANO2Q9NQ90 1003 aa16.2■□□□□ 0.18
RXRB-205ENST00000483821 MINPP1Q9UNW1 487 aa16.2■□□□□ 0.18
RXRB-205ENST00000483821 TUBGCP6Q96RT7 1819 aa16.19■□□□□ 0.18
RXRB-205ENST00000483821 KLRG2A4D1S0 409 aaPredicted RBP16.19■□□□□ 0.18
RXRB-205ENST00000483821 GOLIM4O00461 696 aa16.19■□□□□ 0.18
RXRB-205ENST00000483821 BBOX1O75936 387 aa16.19■□□□□ 0.18
RXRB-205ENST00000483821 ZFYP08048 801 aaPredicted RBP16.19■□□□□ 0.18
RXRB-205ENST00000483821 PDE6BP35913 854 aa16.19■□□□□ 0.18
RXRB-205ENST00000483821 KCNJ4P48050 445 aa16.19■□□□□ 0.18
RXRB-205ENST00000483821 CRY2Q49AN0 593 aa16.19■□□□□ 0.18
RXRB-205ENST00000483821 ZSCAN25Q6NSZ9 544 aa16.19■□□□□ 0.18
RXRB-205ENST00000483821 CELF1Q92879 486 aaKnown RBP16.19■□□□□ 0.18
RXRB-205ENST00000483821 CRAMP1Q96RY5 1269 aa16.19■□□□□ 0.18
RXRB-205ENST00000483821 TAF5LO75529 589 aa16.18■□□□□ 0.18
RXRB-205ENST00000483821 ARID4AP29374 1257 aaPredicted RBP16.18■□□□□ 0.18
RXRB-205ENST00000483821 HOXA10P31260 410 aaPredicted RBP16.18■□□□□ 0.18
RXRB-205ENST00000483821 FKBP4Q02790 459 aaKnown RBP eCLIP16.18■□□□□ 0.18
RXRB-205ENST00000483821 CAVIN4Q5BKX8 364 aa16.18■□□□□ 0.18
RXRB-205ENST00000483821 CCDC102BQ68D86 513 aa16.18■□□□□ 0.18
RXRB-205ENST00000483821 CCDC24Q8N4L8 307 aa16.18■□□□□ 0.18
RXRB-205ENST00000483821 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.18■□□□□ 0.18
RXRB-205ENST00000483821 MMP10P09238 476 aa16.17■□□□□ 0.18
RXRB-205ENST00000483821 ANAPC15P60006 121 aa16.17■□□□□ 0.18
RXRB-205ENST00000483821 SNRKQ9NRH2 765 aa16.17■□□□□ 0.18
RXRB-205ENST00000483821 AK9Q5TCS8 1911 aa16.16■□□□□ 0.18
RXRB-205ENST00000483821 RNF113AO15541 343 aaKnown RBP16.16■□□□□ 0.18
RXRB-205ENST00000483821 NMIQ13287 307 aaPredicted RBP16.16■□□□□ 0.18
RXRB-205ENST00000483821 RABEP1Q15276 862 aa16.16■□□□□ 0.18
RXRB-205ENST00000483821 VPS37DQ86XT2 251 aa16.16■□□□□ 0.18
RXRB-205ENST00000483821 SLC16A10Q8TF71 515 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms