RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 NHSQ6T4R5 1651 aa10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 RREB1Q92766 1687 aa10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 ANKRD36CQ5JPF3 1778 aa10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 EPB41L2O43491 1005 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 ST18O60284 1047 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 TAF7LQ5H9L4 462 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 KIAA1211Q6ZU35 1233 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 LRRC4BQ9NT99 713 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 CHMP5Q9NZZ3 219 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 SH3TC1Q8TE82 1336 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 NTSR2O95665 410 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 HSP90AA1P07900 732 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 MCCP23508 829 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 SCARF1Q14162 830 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 ADCK5Q3MIX3 580 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 RIC1Q4ADV7 1423 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 ZGPATQ8N5A5 531 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 VGLL2Q8N8G2 317 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 RUFY2Q8WXA3 655 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 XAGE2Q96GT9 111 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 UTP14AQ9BVJ6 771 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 TNS1Q9HBL0 1735 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 SEC31BQ9NQW1 1179 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 SNRKQ9NRH2 765 aa10.68□□□□□ -0.7
CDC42SE1-204ENST00000483763 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 CICQ96RK0 1608 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 ANKRD18BA2A2Z9 1011 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 SNAP23O00161 211 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 GOLIM4O00461 696 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 CPA1P15085 419 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 NECTIN1Q15223 517 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 BCL2L12Q9HB09 334 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 FBXO3Q9UK99 471 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 TAF6LQ9Y6J9 622 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 MED23Q9ULK4 1368 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 CCDC171Q6TFL3 1326 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 TXNRD1Q16881 649 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 PRPF40BQ6NWY9 871 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 PI16Q6UXB8 463 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 CCDC129Q6ZRS4 1044 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 NOL8Q76FK4 1167 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 MAP4K1Q92918 833 aa10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 CCNL1Q9UK58 526 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-204ENST00000483763 CNTNAP4Q9C0A0 1308 aa10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 PKP1Q13835 747 aa10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 METTL24Q5JXM2 366 aa10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 C3orf67Q6ZVT6 689 aa10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 KBTBD3Q8NAB2 608 aa10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 HELBQ8NG08 1087 aaPredicted RBP10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 TMX3Q96JJ7 454 aa10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 CNNM1Q9NRU3 951 aa10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 PAG1Q9NWQ8 432 aa10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 SRP68Q9UHB9 627 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 HIP1O00291 1037 aa10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 PDIA4P13667 645 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 PARP10Q53GL7 1025 aa10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 BICDL1Q6ZP65 573 aa10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 RBM8AQ9Y5S9 174 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-204ENST00000483763 TAF5LO75529 589 aa10.65□□□□□ -0.7
CDC42SE1-204ENST00000483763 IFIT1P09914 478 aaKnown RBP10.65□□□□□ -0.7
CDC42SE1-204ENST00000483763 FKBP4Q02790 459 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDC42SE1-204ENST00000483763 USPL1Q5W0Q7 1092 aa10.65□□□□□ -0.7
CDC42SE1-204ENST00000483763 TBC1D9BQ66K14 1250 aa10.65□□□□□ -0.7
CDC42SE1-204ENST00000483763 CLEC4GQ6UXB4 293 aa10.65□□□□□ -0.7
CDC42SE1-204ENST00000483763 GNPATO15228 680 aa10.65□□□□□ -0.71
CDC42SE1-204ENST00000483763 PDE8BO95263 885 aa10.65□□□□□ -0.71
CDC42SE1-204ENST00000483763 ATP2B3Q16720 1220 aa10.65□□□□□ -0.71
CDC42SE1-204ENST00000483763 KCNB2Q92953 911 aa10.65□□□□□ -0.71
CDC42SE1-204ENST00000483763 TNPO1Q92973 898 aaKnown RBP10.65□□□□□ -0.71
CDC42SE1-204ENST00000483763 TTC14Q96N46 770 aa10.65□□□□□ -0.71
CDC42SE1-204ENST00000483763 AKAP2Q9Y2D5 859 aa10.65□□□□□ -0.71
CDC42SE1-204ENST00000483763 COL4A1P02462 1669 aa10.65□□□□□ -0.71
CDC42SE1-204ENST00000483763 RAB3GAP1Q15042 981 aa10.64□□□□□ -0.71
CDC42SE1-204ENST00000483763 ERFEQ4G0M1 354 aa10.64□□□□□ -0.71
CDC42SE1-204ENST00000483763 CREB3L3Q68CJ9 461 aa10.64□□□□□ -0.71
CDC42SE1-204ENST00000483763 MYH3P11055 1940 aa10.64□□□□□ -0.71
CDC42SE1-204ENST00000483763 ZNF831Q5JPB2 1677 aa10.64□□□□□ -0.71
CDC42SE1-204ENST00000483763 RPS6KA4O75676 772 aa10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 CASTP20810 708 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 RC3H1Q5TC82 1133 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 AK7Q96M32 723 aa10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 WTIPA6NIX2 430 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 SLC27A2O14975 620 aa10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 SSFA2P28290 1259 aa10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 MCAMP43121 646 aa10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 ZAP70P43403 619 aa10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 MCMDC2Q4G0Z9 681 aa10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 CCDC158Q5M9N0 1113 aa10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 GORABQ5T7V8 394 aa10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 VPS53Q5VIR6 699 aa10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 CIZ1Q9ULV3 898 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 ZNF652Q9Y2D9 606 aa10.63□□□□□ -0.71
CDC42SE1-204ENST00000483763 PLSCR1O15162 318 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 ZBTB7AO95365 584 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 MCM4P33991 863 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 TTC39AQ5SRH9 613 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 RUFY3Q7L099 469 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 CCDC24Q8N4L8 307 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms