RNA–Protein interactions for RNA: ENST00000483560.1

SNX12-204, Transcript of sorting nexin 12, humanhuman

TSL 5

Gene SNX12, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-204ENST00000483560 TBC1D2BQ9UPU7 963 aa8.52□□□□□ -1.05
SNX12-204ENST00000483560 ZBTB1Q9Y2K1 713 aa8.52□□□□□ -1.05
SNX12-204ENST00000483560 RRP7AQ9Y3A4 280 aaKnown RBP8.52□□□□□ -1.05
SNX12-204ENST00000483560 SALL2Q9Y467 1007 aaPredicted RBP8.52□□□□□ -1.05
SNX12-204ENST00000483560 RGPD5Q99666 1765 aa8.52□□□□□ -1.05
SNX12-204ENST00000483560 ITGBL1O95965 494 aaPredicted RBP8.51□□□□□ -1.05
SNX12-204ENST00000483560 A1BGP04217 495 aa8.51□□□□□ -1.05
SNX12-204ENST00000483560 ARHGAP27Q6ZUM4 889 aa8.51□□□□□ -1.05
SNX12-204ENST00000483560 THUMPD2Q9BTF0 503 aaKnown RBP8.51□□□□□ -1.05
SNX12-204ENST00000483560 PCDHGC3Q9UN70 934 aa8.51□□□□□ -1.05
SNX12-204ENST00000483560 ZNF652Q9Y2D9 606 aa8.51□□□□□ -1.05
SNX12-204ENST00000483560 USP42Q9H9J4 1324 aaKnown RBP8.51□□□□□ -1.05
SNX12-204ENST00000483560 KAT6BQ8WYB5 2073 aa8.5□□□□□ -1.05
SNX12-204ENST00000483560 FAM177BA6PVY3 158 aa8.5□□□□□ -1.05
SNX12-204ENST00000483560 KCNQ3O43525 872 aa8.5□□□□□ -1.05
SNX12-204ENST00000483560 FMNL1O95466 1100 aaPredicted RBP8.5□□□□□ -1.05
SNX12-204ENST00000483560 PIP4K2AP48426 406 aaPredicted RBP8.5□□□□□ -1.05
SNX12-204ENST00000483560 TGFB2P61812 414 aa8.5□□□□□ -1.05
SNX12-204ENST00000483560 KCNC4Q03721 635 aa8.5□□□□□ -1.05
SNX12-204ENST00000483560 ZNF516Q92618 1163 aa8.5□□□□□ -1.05
SNX12-204ENST00000483560 SETDB2Q96T68 719 aa8.5□□□□□ -1.05
SNX12-204ENST00000483560 NARFQ9UHQ1 456 aa8.5□□□□□ -1.05
SNX12-204ENST00000483560 PCDHB15Q9Y5E8 787 aa8.5□□□□□ -1.05
SNX12-204ENST00000483560 HEG1Q9ULI3 1381 aa8.49□□□□□ -1.05
SNX12-204ENST00000483560 MYL6BP14649 208 aa8.49□□□□□ -1.05
SNX12-204ENST00000483560 DPEP1P16444 411 aa8.49□□□□□ -1.05
SNX12-204ENST00000483560 EIF2S2P20042 333 aaKnown RBP8.49□□□□□ -1.05
SNX12-204ENST00000483560 PRELPP51888 382 aa8.49□□□□□ -1.05
SNX12-204ENST00000483560 DALRD3Q5D0E6 543 aaKnown RBP8.49□□□□□ -1.05
SNX12-204ENST00000483560 PRPF38BQ5VTL8 546 aaKnown RBP8.49□□□□□ -1.05
SNX12-204ENST00000483560 BRICD5Q6PL45 260 aa8.49□□□□□ -1.05
SNX12-204ENST00000483560 KIF6Q6ZMV9 814 aa8.49□□□□□ -1.05
SNX12-204ENST00000483560 DZIP3Q86Y13 1208 aaKnown RBP8.49□□□□□ -1.05
SNX12-204ENST00000483560 PROCA1Q8NCQ7 364 aaPredicted RBP8.49□□□□□ -1.05
SNX12-204ENST00000483560 PIM2Q9P1W9 311 aa8.49□□□□□ -1.05
SNX12-204ENST00000483560 SOS1Q07889 1333 aaPredicted RBP8.49□□□□□ -1.05
SNX12-204ENST00000483560 DOT1LQ8TEK3 1739 aa8.49□□□□□ -1.05
SNX12-204ENST00000483560 COL15A1P39059 1388 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 SPDYE5A6NIY4 337 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 H0YIN7 160 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 C6orf229H3BNL8 230 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 SERPINB2P05120 415 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 IL6STP40189 918 aaPredicted RBP8.48□□□□□ -1.05
SNX12-204ENST00000483560 ST5P78524 1137 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 MTMR2Q13614 643 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 CSPP1Q1MSJ5 1256 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 NBPF5PQ86XG9 351 aaPredicted RBP8.48□□□□□ -1.05
SNX12-204ENST00000483560 C16orf71Q8IYS4 520 aaPredicted RBP8.48□□□□□ -1.05
SNX12-204ENST00000483560 DNAJC5GQ8N7S2 189 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 ZNF622Q969S3 477 aaKnown RBP eCLIP8.48□□□□□ -1.05
SNX12-204ENST00000483560 RUNDC1Q96C34 613 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 THAP11Q96EK4 314 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
SNX12-204ENST00000483560 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 PRKRIP1Q9H875 184 aaPredicted RBP8.48□□□□□ -1.05
SNX12-204ENST00000483560 USP16Q9Y5T5 823 aa8.48□□□□□ -1.05
SNX12-204ENST00000483560 BTAF1O14981 1849 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 WNK3Q9BYP7 1800 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 CEP350Q5VT06 3117 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 LILRB3O75022 631 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 TOMM70O94826 608 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 CHRNA5P30532 468 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 CALD1Q05682 793 aaKnown RBP8.47□□□□□ -1.05
SNX12-204ENST00000483560 NFIXQ14938 502 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 RNF19BQ6ZMZ0 732 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 C2CD5Q86YS7 1000 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 CNBD1Q8NA66 436 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 SPSB2Q99619 263 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 ADAMTS8Q9UP79 889 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 UTRNP46939 3433 aa8.47□□□□□ -1.05
SNX12-204ENST00000483560 COL3A1P02461 1466 aaPredicted RBP8.46□□□□□ -1.05
SNX12-204ENST00000483560 PRAMEF22A3QJZ6 481 aa8.46□□□□□ -1.06
SNX12-204ENST00000483560 POLRMTO00411 1230 aaKnown RBP8.46□□□□□ -1.06
SNX12-204ENST00000483560 TMPOP42166 694 aaKnown RBP8.46□□□□□ -1.06
SNX12-204ENST00000483560 EIF5P55010 431 aaKnown RBP8.46□□□□□ -1.06
SNX12-204ENST00000483560 DDR1Q08345 913 aa8.46□□□□□ -1.06
SNX12-204ENST00000483560 QPCTQ16769 361 aa8.46□□□□□ -1.06
SNX12-204ENST00000483560 TBC1D9BQ66K14 1250 aa8.46□□□□□ -1.06
SNX12-204ENST00000483560 RETREG3Q86VR2 466 aa8.46□□□□□ -1.06
SNX12-204ENST00000483560 CCDC24Q8N4L8 307 aa8.46□□□□□ -1.06
SNX12-204ENST00000483560 SYMPKQ92797 1274 aaKnown RBP8.46□□□□□ -1.06
SNX12-204ENST00000483560 PLEKHF1Q96S99 279 aa8.46□□□□□ -1.06
SNX12-204ENST00000483560 USB1Q9BQ65 265 aaKnown RBP8.46□□□□□ -1.06
SNX12-204ENST00000483560 MRS2Q9HD23 443 aa8.46□□□□□ -1.06
SNX12-204ENST00000483560 NIP7Q9Y221 180 aaKnown RBP eCLIP8.46□□□□□ -1.06
SNX12-204ENST00000483560 CEMIPQ8WUJ3 1361 aa8.46□□□□□ -1.06
SNX12-204ENST00000483560 ADH1BP00325 375 aa8.45□□□□□ -1.06
SNX12-204ENST00000483560 PDE6BP35913 854 aa8.45□□□□□ -1.06
SNX12-204ENST00000483560 HTRA3P83110 453 aa8.45□□□□□ -1.06
SNX12-204ENST00000483560 AIMP1Q12904 312 aaKnown RBP8.45□□□□□ -1.06
SNX12-204ENST00000483560 KLRG1Q96E93 195 aa8.45□□□□□ -1.06
SNX12-204ENST00000483560 TMX4Q9H1E5 349 aaPredicted RBP8.45□□□□□ -1.06
SNX12-204ENST00000483560 PODXL2Q9NZ53 605 aa8.45□□□□□ -1.06
SNX12-204ENST00000483560 ADCY9O60503 1353 aa8.45□□□□□ -1.06
SNX12-204ENST00000483560 PAPPAQ13219 1627 aa8.44□□□□□ -1.06
SNX12-204ENST00000483560 TLL1O43897 1013 aa8.44□□□□□ -1.06
SNX12-204ENST00000483560 TM4SF1P30408 202 aa8.44□□□□□ -1.06
SNX12-204ENST00000483560 EIF4A1P60842 406 aaKnown RBP8.44□□□□□ -1.06
SNX12-204ENST00000483560 PPP2R2DQ66LE6 453 aa8.44□□□□□ -1.06
SNX12-204ENST00000483560 TPTE2Q6XPS3 522 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms