RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 PPME1Q9Y570 386 aa8.84□□□□□ -0.99
SGIP1-210ENST00000483060 OPLAHO14841 1288 aa8.83□□□□□ -1
SGIP1-210ENST00000483060 FOXO3O43524 673 aa8.83□□□□□ -1
SGIP1-210ENST00000483060 DTX1Q86Y01 620 aa8.83□□□□□ -1
SGIP1-210ENST00000483060 ARMC10Q8N2F6 343 aa8.83□□□□□ -1
SGIP1-210ENST00000483060 VTI1AQ96AJ9 217 aa8.83□□□□□ -1
SGIP1-210ENST00000483060 NSUN5Q96P11 429 aaKnown RBP8.83□□□□□ -1
SGIP1-210ENST00000483060 DCAF1Q9Y4B6 1507 aa8.83□□□□□ -1
SGIP1-210ENST00000483060 MMP20O60882 483 aa8.82□□□□□ -1
SGIP1-210ENST00000483060 WNT11O96014 354 aa8.82□□□□□ -1
SGIP1-210ENST00000483060 DPYDQ12882 1025 aa8.82□□□□□ -1
SGIP1-210ENST00000483060 RNF43Q68DV7 783 aa8.82□□□□□ -1
SGIP1-210ENST00000483060 CMTR1Q8N1G2 835 aaKnown RBP8.82□□□□□ -1
SGIP1-210ENST00000483060 DBNDD2Q9BQY9 259 aa8.82□□□□□ -1
SGIP1-210ENST00000483060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.82□□□□□ -1
SGIP1-210ENST00000483060 GTF3C3Q9Y5Q9 886 aa8.82□□□□□ -1
SGIP1-210ENST00000483060 ADAMTS4O75173 837 aa8.81□□□□□ -1
SGIP1-210ENST00000483060 LGR5O75473 907 aa8.81□□□□□ -1
SGIP1-210ENST00000483060 PTK7Q13308 1070 aa8.81□□□□□ -1
SGIP1-210ENST00000483060 UTP4Q969X6 686 aaKnown RBP8.81□□□□□ -1
SGIP1-210ENST00000483060 C7orf69Q9H7B7 122 aa8.81□□□□□ -1
SGIP1-210ENST00000483060 TFIP11Q9UBB9 837 aaKnown RBP8.81□□□□□ -1
SGIP1-210ENST00000483060 TRIM33Q9UPN9 1127 aa8.81□□□□□ -1
SGIP1-210ENST00000483060 USP20Q9Y2K6 914 aa8.81□□□□□ -1
SGIP1-210ENST00000483060 MAFBQ9Y5Q3 323 aaPredicted RBP8.81□□□□□ -1
SGIP1-210ENST00000483060 UBTFP17480 764 aaKnown RBP8.8□□□□□ -1
SGIP1-210ENST00000483060 ACAD11Q709F0 780 aa8.8□□□□□ -1
SGIP1-210ENST00000483060 RGL4Q8IZJ4 473 aa8.8□□□□□ -1
SGIP1-210ENST00000483060 CD68P34810 354 aaPredicted RBP8.79□□□□□ -1
SGIP1-210ENST00000483060 CRTC2Q53ET0 693 aaPredicted RBP8.79□□□□□ -1
SGIP1-210ENST00000483060 ANKMY2Q8IV38 441 aa8.79□□□□□ -1
SGIP1-210ENST00000483060 TRIM42Q8IWZ5 723 aa8.79□□□□□ -1
SGIP1-210ENST00000483060 GALNT11Q8NCW6 608 aa8.79□□□□□ -1
SGIP1-210ENST00000483060 FAM46AQ96IP4 442 aaKnown RBP8.79□□□□□ -1
SGIP1-210ENST00000483060 PRR19A6NJB7 356 aa8.78□□□□□ -1
SGIP1-210ENST00000483060 WEE1P30291 646 aa8.78□□□□□ -1
SGIP1-210ENST00000483060 TREML1Q86YW5 311 aa8.78□□□□□ -1
SGIP1-210ENST00000483060 KCNMB2Q9Y691 235 aa8.78□□□□□ -1
SGIP1-210ENST00000483060 HMX2A2RU54 273 aa8.77□□□□□ -1.01
SGIP1-210ENST00000483060 FAM196BA6NMK8 535 aa8.77□□□□□ -1.01
SGIP1-210ENST00000483060 LINC01387J3KSC0 135 aa8.77□□□□□ -1.01
SGIP1-210ENST00000483060 WISP1O95388 367 aa8.77□□□□□ -1.01
SGIP1-210ENST00000483060 FLIIQ13045 1269 aa8.77□□□□□ -1.01
SGIP1-210ENST00000483060 MYRFLQ96LU7 910 aa8.77□□□□□ -1.01
SGIP1-210ENST00000483060 NLRP13Q86W25 1043 aa8.76□□□□□ -1.01
SGIP1-210ENST00000483060 CLEC10AQ8IUN9 316 aa8.76□□□□□ -1.01
SGIP1-210ENST00000483060 ADGRE2Q9UHX3 823 aa8.76□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L15C9J2P7 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L10C9JJH3 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L13C9JLJ4 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L11C9JVI0 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L21D6R901 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L18D6R9N7 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L22D6RA61 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L17D6RBQ6 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L19D6RCP7 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L20D6RJB6 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 USP17L24Q0WX57 530 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 KLHL23Q8NBE8 558 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 FAM83CQ9BQN1 747 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 LRFN2Q9ULH4 789 aa8.75□□□□□ -1.01
SGIP1-210ENST00000483060 SMNDC1O75940 238 aaKnown RBP eCLIP8.74□□□□□ -1.01
SGIP1-210ENST00000483060 CDC27P30260 824 aa8.74□□□□□ -1.01
SGIP1-210ENST00000483060 DUOXA2Q1HG44 320 aa8.74□□□□□ -1.01
SGIP1-210ENST00000483060 KANK4Q5T7N3 995 aaPredicted RBP8.74□□□□□ -1.01
SGIP1-210ENST00000483060 FAM117BQ6P1L5 589 aa8.74□□□□□ -1.01
SGIP1-210ENST00000483060 KIAA1211Q6ZU35 1233 aa8.74□□□□□ -1.01
SGIP1-210ENST00000483060 SPACA7Q96KW9 195 aa8.74□□□□□ -1.01
SGIP1-210ENST00000483060 KCNK4Q9NYG8 393 aa8.74□□□□□ -1.01
SGIP1-210ENST00000483060 FAM20CQ8IXL6 584 aa8.73□□□□□ -1.01
SGIP1-210ENST00000483060 OR13H1Q8NG92 308 aa8.73□□□□□ -1.01
SGIP1-210ENST00000483060 SHKBP1Q8TBC3 707 aa8.73□□□□□ -1.01
SGIP1-210ENST00000483060 GLMNQ92990 594 aa8.73□□□□□ -1.01
SGIP1-210ENST00000483060 PCGF6Q9BYE7 350 aa8.73□□□□□ -1.01
SGIP1-210ENST00000483060 HYAL2Q12891 473 aa8.72□□□□□ -1.01
SGIP1-210ENST00000483060 CEP135Q66GS9 1140 aa8.72□□□□□ -1.01
SGIP1-210ENST00000483060 LACRTQ9GZZ8 138 aa8.72□□□□□ -1.01
SGIP1-210ENST00000483060 TM4SF5O14894 197 aa8.71□□□□□ -1.02
SGIP1-210ENST00000483060 FSCN2O14926 492 aa8.71□□□□□ -1.02
SGIP1-210ENST00000483060 SART1O43290 800 aaKnown RBP8.71□□□□□ -1.02
SGIP1-210ENST00000483060 TRIM26Q12899 539 aaPredicted RBP8.71□□□□□ -1.02
SGIP1-210ENST00000483060 TXNDC11Q6PKC3 985 aa8.71□□□□□ -1.02
SGIP1-210ENST00000483060 VRTNQ9H8Y1 702 aa8.71□□□□□ -1.02
SGIP1-210ENST00000483060 CCDC180Q9P1Z9 1646 aa8.7□□□□□ -1.02
SGIP1-210ENST00000483060 ANKRD34AQ69YU3 496 aa8.7□□□□□ -1.02
SGIP1-210ENST00000483060 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.7□□□□□ -1.02
SGIP1-210ENST00000483060 BEND4Q6ZU67 534 aa8.7□□□□□ -1.02
SGIP1-210ENST00000483060 CARD10Q9BWT7 1032 aa8.7□□□□□ -1.02
SGIP1-210ENST00000483060 KCNF1Q9H3M0 494 aa8.7□□□□□ -1.02
SGIP1-210ENST00000483060 HIF3AQ9Y2N7 669 aa8.7□□□□□ -1.02
SGIP1-210ENST00000483060 BMP3P12645 472 aa8.69□□□□□ -1.02
SGIP1-210ENST00000483060 ATP11AP98196 1134 aa8.69□□□□□ -1.02
SGIP1-210ENST00000483060 COX20Q5RI15 118 aa8.69□□□□□ -1.02
SGIP1-210ENST00000483060 GIMAP7Q8NHV1 300 aa8.69□□□□□ -1.02
SGIP1-210ENST00000483060 ARXQ96QS3 562 aa8.69□□□□□ -1.02
SGIP1-210ENST00000483060 PPP1R12CQ9BZL4 782 aa8.69□□□□□ -1.02
SGIP1-210ENST00000483060 FAM13BQ9NYF5 915 aa8.69□□□□□ -1.02
SGIP1-210ENST00000483060 FAM177BA6PVY3 158 aa8.68□□□□□ -1.02
SGIP1-210ENST00000483060 JAG1P78504 1218 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms