RNA–Protein interactions for RNA: ENST00000482278.5

TUBGCP2-208, Transcript of tubulin gamma complex associated protein 2, human

TSL 2

Gene TUBGCP2, Length 3,553 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBGCP2-208	ENST00000482278	LAMB4	A4D0S4	1761 aa		14.01	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	DYNC1I1	O14576	645 aa		14.01	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	ZKSCAN1	P17029	563 aa	Predicted RBP	14.01	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	ATP5J	P18859	108 aa		14.01	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	GJB2	P29033	226 aa		14.01	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	STK3	Q13188	491 aa		14.01	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	USP48	Q86UV5	1035 aa		14.01	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	FAM89A	Q96GI7	184 aa		14.01	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	SMC3	Q9UQE7	1217 aa		14.01	□□□□□ -0.17
TUBGCP2-208	ENST00000482278		A0A0G2JLW4	131 aa		14	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	GOLIM4	O00461	696 aa		14	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	TAF5L	O75529	589 aa		14	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	TRIM34	Q9BYJ4	488 aa		14	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	ZNF609	O15014	1411 aa		14	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	MED23	Q9ULK4	1368 aa		14	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	VPS53	Q5VIR6	699 aa		14	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	TOGARAM1	Q9Y4F4	1720 aa		14	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	GPT	P24298	496 aa		13.99	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	NHSL1	Q5SYE7	1610 aa		13.99	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	WDR33	Q9C0J8	1336 aa	Known RBP	13.99	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	STX6	O43752	255 aa		13.99	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	LRRC2	Q9BYS8	371 aa		13.99	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	UBR2	Q8IWV8	1755 aa		13.99	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	LETM1	O95202	739 aa	Predicted RBP	13.99	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	KCNB2	Q92953	911 aa		13.99	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	SLC4A9	Q96Q91	983 aa		13.99	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	ZNF445	P59923	1031 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	TMX1	Q9H3N1	280 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	SNRK	Q9NRH2	765 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	TJP1	Q07157	1748 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	NUP188	Q5SRE5	1749 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	NUTM2E	B1AL46	878 aa	Predicted RBP	13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	HIP1	O00291	1037 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	KIF20A	O95235	890 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	ZSCAN22	P10073	491 aa	Predicted RBP	13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	HLF	Q16534	295 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	CCDC191	Q8NCU4	936 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	VPS37C	A5D8V6	355 aa	Predicted RBP	13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	EXOC5	O00471	708 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	FIBP	O43427	364 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	U2AF2	P26368	475 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	ATP2B3	Q16720	1220 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	FAM173B	Q6P4H8	233 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	SASS6	Q6UVJ0	657 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	HAUS7	Q99871	368 aa		13.98	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	TNS2	Q63HR2	1409 aa		13.97	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	FERMT3	Q86UX7	667 aa		13.97	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.97	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	PATL2	C9JE40	543 aa	Known RBP	13.97	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	BLOC1S2	Q6QNY1	142 aa		13.97	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.97	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	PPFIA3	O75145	1194 aa		13.97	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	ADORA1	P30542	326 aa		13.97	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	TOB2	Q14106	344 aa	Predicted RBP	13.97	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	TM6SF1	Q9BZW5	370 aa		13.97	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	ISY1	Q9ULR0	285 aa	Known RBP	13.97	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	STARD3NL	O95772	234 aa		13.96	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	TCIRG1	Q13488	830 aa		13.96	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	HSP90AB3P	Q58FF7	597 aa		13.96	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	PDCL2	Q8N4E4	241 aa		13.96	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	GTPBP4	Q9BZE4	634 aa	Known RBP	13.96	□□□□□ -0.17
TUBGCP2-208	ENST00000482278		A0A1B0GUL7	405 aa		13.96	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	DNM1	Q05193	864 aa	Known RBP	13.96	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	ACSBG1	Q96GR2	724 aa		13.96	□□□□□ -0.17
TUBGCP2-208	ENST00000482278	EYA2	O00167	538 aa		13.96	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	PIP4K2B	P78356	416 aa		13.96	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	CSPP1	Q1MSJ5	1256 aa		13.96	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	UTP14C	Q5TAP6	766 aa	Known RBP	13.96	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	KIF6	Q6ZMV9	814 aa		13.96	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	F13A1	P00488	732 aa		13.95	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	CYP21A2	P08686	494 aa		13.95	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	RPS6KB1	P23443	525 aa		13.95	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	PI16	Q6UXB8	463 aa		13.95	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	PAG1	Q9NWQ8	432 aa		13.95	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	MTMR6	Q9Y217	621 aa		13.95	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	ZBTB1	Q9Y2K1	713 aa		13.95	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	ROBO1	Q9Y6N7	1651 aa		13.95	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	TBC1D2B	Q9UPU7	963 aa		13.95	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	ISCA1	Q9BUE6	129 aa		13.94	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	PAPPA	Q13219	1627 aa		13.94	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	KIAA2012	Q0VF49	1180 aa		13.94	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	MCMDC2	Q4G0Z9	681 aa		13.94	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	RNF20	Q5VTR2	975 aa		13.94	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	STOX1	Q6ZVD7	989 aa		13.94	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	CDC37L1	Q7L3B6	337 aa		13.94	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	KBTBD3	Q8NAB2	608 aa		13.94	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	IL15	P40933	162 aa	Predicted RBP	13.93	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	SCARF1	Q14162	830 aa		13.93	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	CCDC57	Q2TAC2	916 aa		13.93	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	LRSAM1	Q6UWE0	723 aa		13.93	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	CHST3	Q7LGC8	479 aa		13.93	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	JAK2	O60674	1132 aa		13.93	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	IFIT1	P09914	478 aa	Known RBP	13.93	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	PSMA5	P28066	241 aa		13.93	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	CYP19A1	P11511	503 aa	Predicted RBP	13.93	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	FOSB	P53539	338 aa		13.93	□□□□□ -0.18
TUBGCP2-208	ENST00000482278	MBD3	O95983	291 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms