RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 BICC1Q9H694 974 aaKnown RBP20.5■□□□□ 0.87
CCDC78-212ENST00000482152 POLLQ9UGP5 575 aa20.5■□□□□ 0.87
CCDC78-212ENST00000482152 DICER1Q9UPY3 1922 aaKnown RBP20.5■□□□□ 0.87
CCDC78-212ENST00000482152 AOC3Q16853 763 aa20.49■□□□□ 0.87
CCDC78-212ENST00000482152 ZC3H12CQ9C0D7 883 aaKnown RBP20.49■□□□□ 0.87
CCDC78-212ENST00000482152 RCAN3Q9UKA8 241 aa20.49■□□□□ 0.87
CCDC78-212ENST00000482152 ZNRF3Q9ULT6 936 aa20.49■□□□□ 0.87
CCDC78-212ENST00000482152 LEMD3Q9Y2U8 911 aa20.49■□□□□ 0.87
CCDC78-212ENST00000482152 TAF1P21675 1872 aa20.49■□□□□ 0.87
CCDC78-212ENST00000482152 CCDC88AQ3V6T2 1871 aa20.48■□□□□ 0.87
CCDC78-212ENST00000482152 LDHAL6AQ6ZMR3 332 aa20.48■□□□□ 0.87
CCDC78-212ENST00000482152 FTSJ3Q8IY81 847 aaKnown RBP20.48■□□□□ 0.87
CCDC78-212ENST00000482152 DZIP1LQ8IYY4 767 aaKnown RBP20.48■□□□□ 0.87
CCDC78-212ENST00000482152 VEGFAP15692 232 aaPredicted RBP20.47■□□□□ 0.87
CCDC78-212ENST00000482152 SLC51AQ86UW1 340 aa20.47■□□□□ 0.87
CCDC78-212ENST00000482152 GPC2Q8N158 579 aa20.47■□□□□ 0.87
CCDC78-212ENST00000482152 ANKRD44Q8N8A2 993 aa20.47■□□□□ 0.87
CCDC78-212ENST00000482152 UFL1O94874 794 aa20.46■□□□□ 0.87
CCDC78-212ENST00000482152 CLUAP1Q96AJ1 413 aa20.46■□□□□ 0.87
CCDC78-212ENST00000482152 L3MBTL3Q96JM7 780 aaPredicted RBP20.45■□□□□ 0.86
CCDC78-212ENST00000482152 RRAGCQ9HB90 399 aa20.45■□□□□ 0.86
CCDC78-212ENST00000482152 COL4A1P02462 1669 aa20.45■□□□□ 0.86
CCDC78-212ENST00000482152 TIAM2Q8IVF5 1701 aa20.44■□□□□ 0.86
CCDC78-212ENST00000482152 IQCA1LA6NCM1 817 aa20.44■□□□□ 0.86
CCDC78-212ENST00000482152 G3V3G9 751 aa20.44■□□□□ 0.86
CCDC78-212ENST00000482152 DDNO94850 711 aaPredicted RBP20.44■□□□□ 0.86
CCDC78-212ENST00000482152 CHRNDQ07001 517 aa20.44■□□□□ 0.86
CCDC78-212ENST00000482152 TNIP1Q15025 636 aa20.44■□□□□ 0.86
CCDC78-212ENST00000482152 DCAF8Q5TAQ9 597 aa20.44■□□□□ 0.86
CCDC78-212ENST00000482152 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.44■□□□□ 0.86
CCDC78-212ENST00000482152 MEIS3Q99687 375 aa20.44■□□□□ 0.86
CCDC78-212ENST00000482152 NMRK2Q9NPI5 230 aa20.44■□□□□ 0.86
CCDC78-212ENST00000482152 CNNM1Q9NRU3 951 aa20.44■□□□□ 0.86
CCDC78-212ENST00000482152 KIF3CO14782 793 aa20.43■□□□□ 0.86
CCDC78-212ENST00000482152 C16orf71Q8IYS4 520 aaPredicted RBP20.43■□□□□ 0.86
CCDC78-212ENST00000482152 TMEM57Q8N5G2 664 aa20.43■□□□□ 0.86
CCDC78-212ENST00000482152 FBXO3Q9UK99 471 aa20.43■□□□□ 0.86
CCDC78-212ENST00000482152 DUOX1Q9NRD9 1551 aa20.42■□□□□ 0.86
CCDC78-212ENST00000482152 RIMBP2O15034 1052 aa20.42■□□□□ 0.86
CCDC78-212ENST00000482152 GNAI2P04899 355 aa20.42■□□□□ 0.86
CCDC78-212ENST00000482152 LRRFIP2Q9Y608 721 aaKnown RBP20.42■□□□□ 0.86
CCDC78-212ENST00000482152 ZNF804BA4D1E1 1349 aa20.42■□□□□ 0.86
CCDC78-212ENST00000482152 MROH5Q6ZUA9 1318 aa20.42■□□□□ 0.86
CCDC78-212ENST00000482152 ZNF541Q9H0D2 1346 aa20.42■□□□□ 0.86
CCDC78-212ENST00000482152 LTBP1Q14766 1721 aa20.41■□□□□ 0.86
CCDC78-212ENST00000482152 TOMM70O94826 608 aa20.41■□□□□ 0.86
CCDC78-212ENST00000482152 KCNJ4P48050 445 aa20.41■□□□□ 0.86
CCDC78-212ENST00000482152 CXCL9Q07325 125 aa20.41■□□□□ 0.86
CCDC78-212ENST00000482152 CIAPIN1Q6FI81 312 aa20.41■□□□□ 0.86
CCDC78-212ENST00000482152 PODNQ7Z5L7 613 aa20.41■□□□□ 0.86
CCDC78-212ENST00000482152 ZNF594Q96JF6 807 aaPredicted RBP20.41■□□□□ 0.86
CCDC78-212ENST00000482152 TNNQ9UQP3 1299 aa20.41■□□□□ 0.86
CCDC78-212ENST00000482152 RIPOR2Q9Y4F9 1068 aa20.41■□□□□ 0.86
CCDC78-212ENST00000482152 MED23Q9ULK4 1368 aa20.41■□□□□ 0.86
CCDC78-212ENST00000482152 C15orf52Q6ZUT6 534 aaKnown RBP20.4■□□□□ 0.86
CCDC78-212ENST00000482152 YTHDC1Q96MU7 727 aaKnown RBP20.4■□□□□ 0.86
CCDC78-212ENST00000482152 CHMP4BQ9H444 224 aaKnown RBP20.4■□□□□ 0.86
CCDC78-212ENST00000482152 WDR90Q96KV7 1748 aa20.39■□□□□ 0.86
CCDC78-212ENST00000482152 POTECB2RU33 542 aa20.39■□□□□ 0.85
CCDC78-212ENST00000482152 ECE2O60344 883 aa20.39■□□□□ 0.85
CCDC78-212ENST00000482152 MTX1Q13505 466 aa20.39■□□□□ 0.85
CCDC78-212ENST00000482152 ITPRIPQ8IWB1 547 aa20.39■□□□□ 0.85
CCDC78-212ENST00000482152 COA1Q9GZY4 146 aa20.39■□□□□ 0.85
CCDC78-212ENST00000482152 COL4A5P29400 1685 aa20.38■□□□□ 0.85
CCDC78-212ENST00000482152 ZBTB7BO15156 539 aaPredicted RBP20.38■□□□□ 0.85
CCDC78-212ENST00000482152 RFX5P48382 616 aaPredicted RBP20.38■□□□□ 0.85
CCDC78-212ENST00000482152 UBE4AQ14139 1066 aa20.38■□□□□ 0.85
CCDC78-212ENST00000482152 RBM46Q8TBY0 533 aaKnown RBP20.38■□□□□ 0.85
CCDC78-212ENST00000482152 DBNDD1Q9H9R9 158 aa20.38■□□□□ 0.85
CCDC78-212ENST00000482152 GJA3Q9Y6H8 435 aa20.38■□□□□ 0.85
CCDC78-212ENST00000482152 YDJCA8MPS7 323 aa20.37■□□□□ 0.85
CCDC78-212ENST00000482152 CIAO1O76071 339 aa20.37■□□□□ 0.85
CCDC78-212ENST00000482152 RLBP1P12271 317 aa20.37■□□□□ 0.85
CCDC78-212ENST00000482152 LMOD1P29536 600 aaPredicted RBP20.37■□□□□ 0.85
CCDC78-212ENST00000482152 PTPN12Q05209 780 aaKnown RBP20.37■□□□□ 0.85
CCDC78-212ENST00000482152 PDE3AQ14432 1141 aa20.37■□□□□ 0.85
CCDC78-212ENST00000482152 DOK7Q18PE1 504 aa20.37■□□□□ 0.85
CCDC78-212ENST00000482152 HACL1Q9UJ83 578 aa20.37■□□□□ 0.85
CCDC78-212ENST00000482152 EYA2O00167 538 aa20.36■□□□□ 0.85
CCDC78-212ENST00000482152 TAF5LO75529 589 aa20.36■□□□□ 0.85
CCDC78-212ENST00000482152 RAD17O75943 681 aa20.36■□□□□ 0.85
CCDC78-212ENST00000482152 C1QTNF8P60827 252 aa20.36■□□□□ 0.85
CCDC78-212ENST00000482152 PNMA8AQ86V59 439 aaPredicted RBP20.36■□□□□ 0.85
CCDC78-212ENST00000482152 GPR101Q96P66 508 aaPredicted RBP20.36■□□□□ 0.85
CCDC78-212ENST00000482152 PUS3Q9BZE2 481 aaKnown RBP20.36■□□□□ 0.85
CCDC78-212ENST00000482152 PLIN1O60240 522 aa20.35■□□□□ 0.85
CCDC78-212ENST00000482152 RPS12P25398 132 aaKnown RBP20.35■□□□□ 0.85
CCDC78-212ENST00000482152 METTL24Q5JXM2 366 aa20.35■□□□□ 0.85
CCDC78-212ENST00000482152 HELBQ8NG08 1087 aaPredicted RBP20.35■□□□□ 0.85
CCDC78-212ENST00000482152 DPF2Q92785 391 aa20.35■□□□□ 0.85
CCDC78-212ENST00000482152 TAF1DQ9H5J8 278 aaPredicted RBP20.35■□□□□ 0.85
CCDC78-212ENST00000482152 COPRSQ9NQ92 184 aa20.35■□□□□ 0.85
CCDC78-212ENST00000482152 SRGAP3O43295 1099 aa20.34■□□□□ 0.85
CCDC78-212ENST00000482152 PDE8BO95263 885 aa20.34■□□□□ 0.85
CCDC78-212ENST00000482152 VIL1P09327 827 aaKnown RBP20.34■□□□□ 0.85
CCDC78-212ENST00000482152 FSTL1Q12841 308 aa20.34■□□□□ 0.85
CCDC78-212ENST00000482152 LRRC24Q50LG9 513 aa20.34■□□□□ 0.85
CCDC78-212ENST00000482152 PANK1Q8TE04 598 aa20.34■□□□□ 0.85
CCDC78-212ENST00000482152 DDX19BQ9UMR2 479 aa20.34■□□□□ 0.85
CCDC78-212ENST00000482152 WTIPA6NIX2 430 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms