RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 TMC7Q7Z402 723 aa10.38□□□□□ -0.75
LINC00888-203ENST00000482098 SH3RF1Q7Z6J0 888 aa10.38□□□□□ -0.75
LINC00888-203ENST00000482098 CCDC24Q8N4L8 307 aa10.38□□□□□ -0.75
LINC00888-203ENST00000482098 TMC1Q8TDI8 760 aa10.38□□□□□ -0.75
LINC00888-203ENST00000482098 STK32BQ9NY57 414 aa10.38□□□□□ -0.75
LINC00888-203ENST00000482098 TSR3Q9UJK0 312 aaKnown RBP10.38□□□□□ -0.75
LINC00888-203ENST00000482098 BRPF3Q9ULD4 1205 aa10.38□□□□□ -0.75
LINC00888-203ENST00000482098 CHD4Q14839 1912 aa10.38□□□□□ -0.75
LINC00888-203ENST00000482098 CRYBG1Q9Y4K1 1723 aa10.38□□□□□ -0.75
LINC00888-203ENST00000482098 AATKQ6ZMQ8 1374 aa10.38□□□□□ -0.75
LINC00888-203ENST00000482098 TULP4Q9NRJ4 1543 aa10.38□□□□□ -0.75
LINC00888-203ENST00000482098 GOLGA8CPA6NN73 597 aa10.37□□□□□ -0.75
LINC00888-203ENST00000482098 POTEB2H3BUK9 544 aa10.37□□□□□ -0.75
LINC00888-203ENST00000482098 NPR3P17342 541 aa10.37□□□□□ -0.75
LINC00888-203ENST00000482098 IGFBP4P22692 258 aa10.37□□□□□ -0.75
LINC00888-203ENST00000482098 HDLBPQ00341 1268 aaKnown RBP10.37□□□□□ -0.75
LINC00888-203ENST00000482098 SLC15A2Q16348 729 aa10.37□□□□□ -0.75
LINC00888-203ENST00000482098 ERFEQ4G0M1 354 aa10.37□□□□□ -0.75
LINC00888-203ENST00000482098 CAPN12Q6ZSI9 719 aa10.37□□□□□ -0.75
LINC00888-203ENST00000482098 VTI1AQ96AJ9 217 aa10.37□□□□□ -0.75
LINC00888-203ENST00000482098 CITED4Q96RK1 184 aa10.37□□□□□ -0.75
LINC00888-203ENST00000482098 PDGFDQ9GZP0 370 aaPredicted RBP10.37□□□□□ -0.75
LINC00888-203ENST00000482098 MRS2Q9HD23 443 aa10.37□□□□□ -0.75
LINC00888-203ENST00000482098 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.36□□□□□ -0.75
LINC00888-203ENST00000482098 SOWAHBA6NEL2 793 aa10.35□□□□□ -0.75
LINC00888-203ENST00000482098 NCLP19338 710 aaKnown RBP10.35□□□□□ -0.75
LINC00888-203ENST00000482098 DDB1Q16531 1140 aa10.35□□□□□ -0.75
LINC00888-203ENST00000482098 C9orf131Q5VYM1 1079 aa10.35□□□□□ -0.75
LINC00888-203ENST00000482098 PIK3R5Q8WYR1 880 aa10.35□□□□□ -0.75
LINC00888-203ENST00000482098 PRDM9Q9NQV7 894 aa10.35□□□□□ -0.75
LINC00888-203ENST00000482098 CDV3Q9UKY7 258 aaKnown RBP10.35□□□□□ -0.75
LINC00888-203ENST00000482098 MYOM1P52179 1685 aa10.34□□□□□ -0.75
LINC00888-203ENST00000482098 USP19O94966 1318 aa10.34□□□□□ -0.75
LINC00888-203ENST00000482098 CRB1P82279 1406 aa10.34□□□□□ -0.75
LINC00888-203ENST00000482098 PARP4Q9UKK3 1724 aaKnown RBP10.34□□□□□ -0.75
LINC00888-203ENST00000482098 TREHO43280 583 aa10.34□□□□□ -0.75
LINC00888-203ENST00000482098 PLCB3Q01970 1234 aa10.34□□□□□ -0.75
LINC00888-203ENST00000482098 GPR162Q16538 588 aa10.34□□□□□ -0.75
LINC00888-203ENST00000482098 TXNRD1Q16881 649 aa10.34□□□□□ -0.75
LINC00888-203ENST00000482098 TMEM87AQ8NBN3 555 aa10.34□□□□□ -0.75
LINC00888-203ENST00000482098 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.34□□□□□ -0.75
LINC00888-203ENST00000482098 STAC3Q96MF2 364 aa10.34□□□□□ -0.75
LINC00888-203ENST00000482098 PURBQ96QR8 312 aaKnown RBP10.34□□□□□ -0.75
LINC00888-203ENST00000482098 PCDH10Q9P2E7 1040 aa10.34□□□□□ -0.75
LINC00888-203ENST00000482098 POLR3AO14802 1390 aaPredicted RBP10.34□□□□□ -0.75
LINC00888-203ENST00000482098 PEAK1Q9H792 1746 aa10.33□□□□□ -0.76
LINC00888-203ENST00000482098 LDHBP07195 334 aaKnown RBP10.33□□□□□ -0.76
LINC00888-203ENST00000482098 FMR1Q06787 632 aaKnown RBP eCLIP10.33□□□□□ -0.76
LINC00888-203ENST00000482098 HIRIP3Q9BW71 556 aaPredicted RBP10.33□□□□□ -0.76
LINC00888-203ENST00000482098 COL5A2P05997 1499 aaPredicted RBP10.32□□□□□ -0.76
LINC00888-203ENST00000482098 BRD4O60885 1362 aaPredicted RBP10.32□□□□□ -0.76
LINC00888-203ENST00000482098 ESPNB1AK53 854 aa10.32□□□□□ -0.76
LINC00888-203ENST00000482098 PRPF40AO75400 957 aaKnown RBP10.32□□□□□ -0.76
LINC00888-203ENST00000482098 GCP02774 474 aa10.32□□□□□ -0.76
LINC00888-203ENST00000482098 MPSTP25325 297 aa10.32□□□□□ -0.76
LINC00888-203ENST00000482098 AAMPQ13685 434 aa10.32□□□□□ -0.76
LINC00888-203ENST00000482098 PTCRAQ6ISU1 281 aaPredicted RBP10.32□□□□□ -0.76
LINC00888-203ENST00000482098 ALKBH2Q6NS38 261 aa10.32□□□□□ -0.76
LINC00888-203ENST00000482098 NLRP13Q86W25 1043 aa10.32□□□□□ -0.76
LINC00888-203ENST00000482098 ZNF687Q8N1G0 1237 aa10.32□□□□□ -0.76
LINC00888-203ENST00000482098 NUDT16Q96DE0 195 aaKnown RBP10.32□□□□□ -0.76
LINC00888-203ENST00000482098 DMRTB1Q96MA1 342 aa10.32□□□□□ -0.76
LINC00888-203ENST00000482098 TANGO6Q9C0B7 1094 aa10.32□□□□□ -0.76
LINC00888-203ENST00000482098 ZNF358Q9NW07 568 aa10.32□□□□□ -0.76
LINC00888-203ENST00000482098 LMO7Q8WWI1 1683 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 GRIN3BO60391 1043 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 MAPK8P45983 427 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 NT5DC4Q86YG4 428 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 ABTB2Q8N961 1025 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 GAS2L2Q8NHY3 880 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 SLC16A10Q8TF71 515 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 SCG3Q8WXD2 468 aaKnown RBP10.31□□□□□ -0.76
LINC00888-203ENST00000482098 BAP1Q92560 729 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 MPHOSPH9Q99550 1183 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 PARP2Q9UGN5 583 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 TRAK1Q9UPV9 953 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 PHRF1Q9P1Y6 1649 aaKnown RBP10.31□□□□□ -0.76
LINC00888-203ENST00000482098 ADGRB1O14514 1584 aa10.31□□□□□ -0.76
LINC00888-203ENST00000482098 BACH1O14867 736 aa10.3□□□□□ -0.76
LINC00888-203ENST00000482098 SORBS3O60504 671 aa10.3□□□□□ -0.76
LINC00888-203ENST00000482098 BCAMP50895 628 aa10.3□□□□□ -0.76
LINC00888-203ENST00000482098 ATP2B2Q01814 1243 aa10.3□□□□□ -0.76
LINC00888-203ENST00000482098 POTEHQ6S545 545 aa10.3□□□□□ -0.76
LINC00888-203ENST00000482098 MARCH10Q8NA82 808 aaPredicted RBP10.3□□□□□ -0.76
LINC00888-203ENST00000482098 PRKD2Q9BZL6 878 aa10.3□□□□□ -0.76
LINC00888-203ENST00000482098 METTL5Q9NRN9 209 aaKnown RBP10.3□□□□□ -0.76
LINC00888-203ENST00000482098 HSPA6P17066 643 aa10.29□□□□□ -0.76
LINC00888-203ENST00000482098 NUTM2GQ5VZR2 741 aa10.29□□□□□ -0.76
LINC00888-203ENST00000482098 C16orf46Q6P387 395 aa10.29□□□□□ -0.76
LINC00888-203ENST00000482098 PTF1AQ7RTS3 328 aa10.29□□□□□ -0.76
LINC00888-203ENST00000482098 TMC4Q7Z404 712 aa10.29□□□□□ -0.76
LINC00888-203ENST00000482098 FOXJ1Q92949 421 aa10.29□□□□□ -0.76
LINC00888-203ENST00000482098 DUSP9Q99956 384 aaKnown RBP10.29□□□□□ -0.76
LINC00888-203ENST00000482098 ACEP12821 1306 aa10.29□□□□□ -0.76
LINC00888-203ENST00000482098 ADH1BP00325 375 aa10.28□□□□□ -0.76
LINC00888-203ENST00000482098 COPS2P61201 443 aa10.28□□□□□ -0.76
LINC00888-203ENST00000482098 RAD51AP2Q09MP3 1159 aa10.28□□□□□ -0.76
LINC00888-203ENST00000482098 PSMD2Q13200 908 aa10.28□□□□□ -0.76
LINC00888-203ENST00000482098 LINC01559Q495D7 138 aa10.28□□□□□ -0.76
LINC00888-203ENST00000482098 ADGRD1Q6QNK2 874 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms