RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	EIF6	P56537	245 aa	Known RBP	11.33	□□□□□ -0.6
UBE2F-222	ENST00000482096	FAM163A	Q96GL9	167 aa	Predicted RBP	11.33	□□□□□ -0.6
UBE2F-222	ENST00000482096	RBM17	Q96I25	401 aa	Known RBP	11.33	□□□□□ -0.6
UBE2F-222	ENST00000482096	PNN	Q9H307	717 aa	Known RBP	11.33	□□□□□ -0.6
UBE2F-222	ENST00000482096	WBP1L	Q9NX94	342 aa		11.33	□□□□□ -0.6
UBE2F-222	ENST00000482096	ADAMTSL1	Q8N6G6	1762 aa		11.33	□□□□□ -0.6
UBE2F-222	ENST00000482096	LAMB4	A4D0S4	1761 aa		11.32	□□□□□ -0.6
UBE2F-222	ENST00000482096	TULP1	O00294	542 aa	Predicted RBP	11.32	□□□□□ -0.6
UBE2F-222	ENST00000482096	CTCF	P49711	727 aa	Predicted RBP	11.32	□□□□□ -0.6
UBE2F-222	ENST00000482096	DEFB115	Q30KQ5	88 aa		11.32	□□□□□ -0.6
UBE2F-222	ENST00000482096	LRP10	Q7Z4F1	713 aa		11.32	□□□□□ -0.6
UBE2F-222	ENST00000482096	PPP1R42	Q7Z4L9	355 aa		11.32	□□□□□ -0.6
UBE2F-222	ENST00000482096	LARGE2	Q8N3Y3	721 aa		11.32	□□□□□ -0.6
UBE2F-222	ENST00000482096	AIDA	Q96BJ3	306 aa		11.32	□□□□□ -0.6
UBE2F-222	ENST00000482096	GJA3	Q9Y6H8	435 aa		11.32	□□□□□ -0.6
UBE2F-222	ENST00000482096	KDM3B	Q7LBC6	1761 aa		11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	COL4A5	P29400	1685 aa		11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	PPEF1	O14829	653 aa	Predicted RBP	11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	LMOD1	P29536	600 aa	Predicted RBP	11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	EPS15	P42566	896 aa		11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	SCNN1D	P51172	638 aa		11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	PARP10	Q53GL7	1025 aa		11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	SLC10A5	Q5PT55	438 aa		11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	SMYD5	Q6GMV2	418 aa		11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	NLRP3	Q96P20	1036 aa		11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	LHX6	Q9UPM6	363 aa		11.31	□□□□□ -0.6
UBE2F-222	ENST00000482096	TCERG1	O14776	1098 aa	Known RBP	11.3	□□□□□ -0.6
UBE2F-222	ENST00000482096	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
UBE2F-222	ENST00000482096	SLC51A	Q86UW1	340 aa		11.3	□□□□□ -0.6
UBE2F-222	ENST00000482096	VPS33B	Q9H267	617 aa		11.3	□□□□□ -0.6
UBE2F-222	ENST00000482096	TSPYL4	Q9UJ04	414 aa		11.3	□□□□□ -0.6
UBE2F-222	ENST00000482096	WDR33	Q9C0J8	1336 aa	Known RBP	11.3	□□□□□ -0.6
UBE2F-222	ENST00000482096	MAPK8IP3	Q9UPT6	1336 aa		11.3	□□□□□ -0.6
UBE2F-222	ENST00000482096	NUP98	P52948	1817 aa		11.3	□□□□□ -0.6
UBE2F-222	ENST00000482096	LBX1	P52954	281 aa		11.29	□□□□□ -0.6
UBE2F-222	ENST00000482096	USP50	Q70EL3	339 aa	Predicted RBP	11.29	□□□□□ -0.6
UBE2F-222	ENST00000482096	NIM1K	Q8IY84	436 aa		11.29	□□□□□ -0.6
UBE2F-222	ENST00000482096	UTP14A	Q9BVJ6	771 aa	Known RBP	11.29	□□□□□ -0.6
UBE2F-222	ENST00000482096	BABAM1	Q9NWV8	329 aa		11.29	□□□□□ -0.6
UBE2F-222	ENST00000482096	ATP6V0A2	Q9Y487	856 aa		11.29	□□□□□ -0.6
UBE2F-222	ENST00000482096	PPIP5K2	O43314	1243 aa		11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	HSPA8	P11142	646 aa	Known RBP	11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	EIF2S2	P20042	333 aa	Known RBP	11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	RIPK4	P57078	832 aa		11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	MAP2K1	Q02750	393 aa	Predicted RBP	11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	AOC3	Q16853	763 aa		11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	RBM26	Q5T8P6	1007 aa	Known RBP	11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	ZNF454	Q8N9F8	522 aa		11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	MARVELD3	Q96A59	401 aa		11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	TMX4	Q9H1E5	349 aa	Predicted RBP	11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	ABT1	Q9ULW3	272 aa	Known RBP	11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	PCDHGA10	Q9Y5H3	936 aa		11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	DLG5	Q8TDM6	1919 aa		11.28	□□□□□ -0.6
UBE2F-222	ENST00000482096	LTBP1	Q14766	1721 aa		11.27	□□□□□ -0.61
UBE2F-222	ENST00000482096	BBOX1	O75936	387 aa		11.27	□□□□□ -0.61
UBE2F-222	ENST00000482096	ANXA1	P04083	346 aa		11.27	□□□□□ -0.61
UBE2F-222	ENST00000482096	OSBP	P22059	807 aa		11.27	□□□□□ -0.61
UBE2F-222	ENST00000482096	FMR1	Q06787	632 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
UBE2F-222	ENST00000482096	PROSER3	Q2NL68	480 aa		11.27	□□□□□ -0.61
UBE2F-222	ENST00000482096	CST9	Q5W186	159 aa		11.27	□□□□□ -0.61
UBE2F-222	ENST00000482096	SUPT20H	Q8NEM7	779 aa		11.27	□□□□□ -0.61
UBE2F-222	ENST00000482096	GPRC5D	Q9NZD1	345 aa		11.27	□□□□□ -0.61
UBE2F-222	ENST00000482096	ABCC4	O15439	1325 aa		11.27	□□□□□ -0.61
UBE2F-222	ENST00000482096	TMPO	P42166	694 aa	Known RBP	11.26	□□□□□ -0.61
UBE2F-222	ENST00000482096	FOSB	P53539	338 aa		11.26	□□□□□ -0.61
UBE2F-222	ENST00000482096	CXCL9	Q07325	125 aa		11.26	□□□□□ -0.61
UBE2F-222	ENST00000482096	HSP90AB3P	Q58FF7	597 aa		11.26	□□□□□ -0.61
UBE2F-222	ENST00000482096	COPS6	Q7L5N1	327 aa		11.26	□□□□□ -0.61
UBE2F-222	ENST00000482096	NLRP10	Q86W26	655 aa		11.26	□□□□□ -0.61
UBE2F-222	ENST00000482096	SP8	Q8IXZ3	490 aa		11.26	□□□□□ -0.61
UBE2F-222	ENST00000482096	CAPNS2	Q96L46	248 aa		11.26	□□□□□ -0.61
UBE2F-222	ENST00000482096	ADARB2	Q9NS39	739 aa	Known RBP	11.26	□□□□□ -0.61
UBE2F-222	ENST00000482096	ZNRF3	Q9ULT6	936 aa		11.26	□□□□□ -0.61
UBE2F-222	ENST00000482096	TRAF5	O00463	557 aa		11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	HCLS1	P14317	486 aa	Predicted RBP	11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	ECE1	P42892	770 aa		11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	LMOD3	Q0VAK6	560 aa		11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	KIAA2012	Q0VF49	1180 aa		11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	TCIRG1	Q13488	830 aa		11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	LCE2D	Q5TA82	110 aa	Predicted RBP	11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	DPP8	Q6V1X1	898 aa	Predicted RBP	11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	MPND	Q8N594	471 aa		11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	XAGE3	Q8WTP9	111 aa		11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	PGAP2	Q9UHJ9	254 aa		11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	TLL2	Q9Y6L7	1015 aa		11.25	□□□□□ -0.61
UBE2F-222	ENST00000482096	GMPS	P49915	693 aa	Predicted RBP	11.24	□□□□□ -0.61
UBE2F-222	ENST00000482096	EMP3	P54852	163 aa		11.24	□□□□□ -0.61
UBE2F-222	ENST00000482096	AIMP1	Q12904	312 aa	Known RBP	11.24	□□□□□ -0.61
UBE2F-222	ENST00000482096	CIAPIN1	Q6FI81	312 aa		11.24	□□□□□ -0.61
UBE2F-222	ENST00000482096	CYP4F22	Q6NT55	531 aa		11.24	□□□□□ -0.61
UBE2F-222	ENST00000482096	DDX46	Q7L014	1031 aa	Known RBP	11.24	□□□□□ -0.61
UBE2F-222	ENST00000482096	GPR101	Q96P66	508 aa	Predicted RBP	11.24	□□□□□ -0.61
UBE2F-222	ENST00000482096	TRMT112	Q9UI30	125 aa	Known RBP	11.24	□□□□□ -0.61
UBE2F-222	ENST00000482096	SH3TC1	Q8TE82	1336 aa		11.24	□□□□□ -0.61
UBE2F-222	ENST00000482096	CDHR2	Q9BYE9	1310 aa		11.24	□□□□□ -0.61
UBE2F-222	ENST00000482096	CHL1	O00533	1208 aa		11.23	□□□□□ -0.61
UBE2F-222	ENST00000482096	GRAP	Q13588	217 aa		11.23	□□□□□ -0.61
UBE2F-222	ENST00000482096	RALBP1	Q15311	655 aa		11.23	□□□□□ -0.61

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