RNA–Protein interactions for RNA: ENST00000478404.1

RNF149-204, Transcript of ring finger protein 149, humanhuman

TSL 2

Gene RNF149, Length 997 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-204ENST00000478404 SNX29Q8TEQ0 813 aa8.48□□□□□ -1.05
RNF149-204ENST00000478404 CHRDQ9H2X0 955 aa8.48□□□□□ -1.05
RNF149-204ENST00000478404 PARP2Q9UGN5 583 aa8.48□□□□□ -1.05
RNF149-204ENST00000478404 KHNYNO15037 678 aaKnown RBP8.47□□□□□ -1.05
RNF149-204ENST00000478404 CPNE3O75131 537 aaKnown RBP8.47□□□□□ -1.05
RNF149-204ENST00000478404 RECKO95980 971 aa8.47□□□□□ -1.05
RNF149-204ENST00000478404 GRIN2CQ14957 1233 aa8.47□□□□□ -1.05
RNF149-204ENST00000478404 USPL1Q5W0Q7 1092 aa8.47□□□□□ -1.05
RNF149-204ENST00000478404 NLRP13Q86W25 1043 aa8.47□□□□□ -1.05
RNF149-204ENST00000478404 FBF1Q8TES7 1133 aa8.47□□□□□ -1.05
RNF149-204ENST00000478404 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
RNF149-204ENST00000478404 ZFYVE28Q9HCC9 887 aa8.47□□□□□ -1.05
RNF149-204ENST00000478404 MKL2Q9ULH7 1088 aa8.47□□□□□ -1.05
RNF149-204ENST00000478404 GPR25O00155 361 aa8.46□□□□□ -1.06
RNF149-204ENST00000478404 DAB2P98082 770 aa8.46□□□□□ -1.06
RNF149-204ENST00000478404 TMC4Q7Z404 712 aa8.46□□□□□ -1.06
RNF149-204ENST00000478404 FAM161BQ96MY7 647 aa8.46□□□□□ -1.06
RNF149-204ENST00000478404 ABI2Q9NYB9 513 aaPredicted RBP8.46□□□□□ -1.06
RNF149-204ENST00000478404 CNTN3Q9P232 1028 aa8.46□□□□□ -1.06
RNF149-204ENST00000478404 PHACTR2O75167 634 aa8.45□□□□□ -1.06
RNF149-204ENST00000478404 CCINQ13939 588 aa8.45□□□□□ -1.06
RNF149-204ENST00000478404 C1orf127Q8N9H9 656 aa8.45□□□□□ -1.06
RNF149-204ENST00000478404 ABHD17AQ96GS6 310 aa8.45□□□□□ -1.06
RNF149-204ENST00000478404 SASH3O75995 380 aa8.44□□□□□ -1.06
RNF149-204ENST00000478404 TARSP26639 723 aaKnown RBP8.44□□□□□ -1.06
RNF149-204ENST00000478404 LDLRAD1Q5T700 205 aa8.44□□□□□ -1.06
RNF149-204ENST00000478404 GTPBP3Q969Y2 492 aaKnown RBP8.44□□□□□ -1.06
RNF149-204ENST00000478404 CCDC74AQ96AQ1 378 aa8.44□□□□□ -1.06
RNF149-204ENST00000478404 MARK1Q9P0L2 795 aa8.44□□□□□ -1.06
RNF149-204ENST00000478404 ZFATQ9P243 1243 aa8.44□□□□□ -1.06
RNF149-204ENST00000478404 ATXN7L1Q9ULK2 861 aaPredicted RBP8.44□□□□□ -1.06
RNF149-204ENST00000478404 GNA15P30679 374 aa8.43□□□□□ -1.06
RNF149-204ENST00000478404 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
RNF149-204ENST00000478404 ZMYM1Q5SVZ6 1142 aa8.43□□□□□ -1.06
RNF149-204ENST00000478404 KRTAP19-1Q8IUB9 90 aa8.43□□□□□ -1.06
RNF149-204ENST00000478404 SLC30A3Q99726 388 aa8.43□□□□□ -1.06
RNF149-204ENST00000478404 EREGO14944 169 aa8.42□□□□□ -1.06
RNF149-204ENST00000478404 MMP20O60882 483 aa8.42□□□□□ -1.06
RNF149-204ENST00000478404 CD33P20138 364 aa8.42□□□□□ -1.06
RNF149-204ENST00000478404 SPEM2Q0P670 501 aa8.42□□□□□ -1.06
RNF149-204ENST00000478404 FAM182BQ5T319 152 aa8.42□□□□□ -1.06
RNF149-204ENST00000478404 PI16Q6UXB8 463 aa8.42□□□□□ -1.06
RNF149-204ENST00000478404 NSFL1CQ9UNZ2 370 aaKnown RBP8.42□□□□□ -1.06
RNF149-204ENST00000478404 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.42□□□□□ -1.06
RNF149-204ENST00000478404 NISCHQ9Y2I1 1504 aa8.42□□□□□ -1.06
RNF149-204ENST00000478404 C1QTNF9BB2RNN3 333 aa8.41□□□□□ -1.06
RNF149-204ENST00000478404 CYP2E1P05181 493 aaPredicted RBP8.41□□□□□ -1.06
RNF149-204ENST00000478404 PSMD2Q13200 908 aa8.41□□□□□ -1.06
RNF149-204ENST00000478404 KRT25Q7Z3Z0 450 aa8.41□□□□□ -1.06
RNF149-204ENST00000478404 GALNT12Q8IXK2 581 aa8.41□□□□□ -1.06
RNF149-204ENST00000478404 OR13H1Q8NG92 308 aa8.41□□□□□ -1.06
RNF149-204ENST00000478404 EPS8L3Q8TE67 593 aaKnown RBP8.41□□□□□ -1.06
RNF149-204ENST00000478404 BACH2Q9BYV9 841 aa8.41□□□□□ -1.06
RNF149-204ENST00000478404 EFCC1Q9HA90 598 aa8.41□□□□□ -1.06
RNF149-204ENST00000478404 SHISA8B8ZZ34 492 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 SORBS3O60504 671 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 MAP3K6O95382 1288 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 POLR3DP05423 398 aaPredicted RBP8.4□□□□□ -1.06
RNF149-204ENST00000478404 RARAP10276 462 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 NFKB1P19838 968 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 MX2P20592 715 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 FGFR3P22607 806 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.4□□□□□ -1.06
RNF149-204ENST00000478404 TTC39BQ5VTQ0 682 aaPredicted RBP8.4□□□□□ -1.06
RNF149-204ENST00000478404 CD163Q86VB7 1156 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 PMEPA1Q969W9 287 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 FRMD6Q96NE9 622 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 OXCT2Q9BYC2 517 aaPredicted RBP8.4□□□□□ -1.06
RNF149-204ENST00000478404 BCL11AQ9H165 835 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 SEMA6BQ9H3T3 888 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 NPHS2Q9NP85 383 aa8.4□□□□□ -1.06
RNF149-204ENST00000478404 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.4□□□□□ -1.06
RNF149-204ENST00000478404 CUX2O14529 1486 aa8.39□□□□□ -1.07
RNF149-204ENST00000478404 TCF3P15923 654 aa8.39□□□□□ -1.07
RNF149-204ENST00000478404 CES1P23141 567 aa8.39□□□□□ -1.07
RNF149-204ENST00000478404 TSNAXIP1Q2TAA8 658 aa8.39□□□□□ -1.07
RNF149-204ENST00000478404 LINC00114Q6XXX2 140 aa8.39□□□□□ -1.07
RNF149-204ENST00000478404 TRERF1Q96PN7 1200 aa8.39□□□□□ -1.07
RNF149-204ENST00000478404 PHF24Q9UPV7 400 aa8.39□□□□□ -1.07
RNF149-204ENST00000478404 AK5Q9Y6K8 562 aa8.39□□□□□ -1.07
RNF149-204ENST00000478404 HOXD8P13378 290 aaPredicted RBP8.38□□□□□ -1.07
RNF149-204ENST00000478404 SOX18P35713 384 aa8.38□□□□□ -1.07
RNF149-204ENST00000478404 MAP2K3P46734 347 aa8.38□□□□□ -1.07
RNF149-204ENST00000478404 CTBSQ01459 385 aa8.38□□□□□ -1.07
RNF149-204ENST00000478404 RAB44Q7Z6P3 723 aaPredicted RBP8.38□□□□□ -1.07
RNF149-204ENST00000478404 OSBPL7Q9BZF2 842 aa8.38□□□□□ -1.07
RNF149-204ENST00000478404 MRS2Q9HD23 443 aa8.38□□□□□ -1.07
RNF149-204ENST00000478404 TLR7Q9NYK1 1049 aaKnown RBP8.38□□□□□ -1.07
RNF149-204ENST00000478404 KANSL3Q9P2N6 904 aa8.38□□□□□ -1.07
RNF149-204ENST00000478404 SALL4Q9UJQ4 1053 aa8.38□□□□□ -1.07
RNF149-204ENST00000478404 SPG7Q9UQ90 795 aa8.38□□□□□ -1.07
RNF149-204ENST00000478404 KIF4AO95239 1232 aa8.37□□□□□ -1.07
RNF149-204ENST00000478404 CTSHP09668 335 aa8.37□□□□□ -1.07
RNF149-204ENST00000478404 HOXB4P17483 251 aaPredicted RBP8.37□□□□□ -1.07
RNF149-204ENST00000478404 PEAR1Q5VY43 1037 aaPredicted RBP8.37□□□□□ -1.07
RNF149-204ENST00000478404 C1orf229Q6ZS94 237 aaPredicted RBP8.37□□□□□ -1.07
RNF149-204ENST00000478404 BHMTQ93088 406 aa8.37□□□□□ -1.07
RNF149-204ENST00000478404 PNMA5Q96PV4 448 aa8.37□□□□□ -1.07
RNF149-204ENST00000478404 VTI1BQ9UEU0 232 aa8.37□□□□□ -1.07
RNF149-204ENST00000478404 ITGAEP38570 1179 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms