RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 ZNF609O15014 1411 aa9.79□□□□□ -0.84
PRPF3-205ENST00000476970 BRCA2P51587 3418 aa9.79□□□□□ -0.84
PRPF3-205ENST00000476970 LAMB1P07942 1786 aa9.78□□□□□ -0.84
PRPF3-205ENST00000476970 ECE2O60344 883 aa9.78□□□□□ -0.84
PRPF3-205ENST00000476970 PRKAR2BP31323 418 aa9.78□□□□□ -0.84
PRPF3-205ENST00000476970 NF2P35240 595 aa9.78□□□□□ -0.84
PRPF3-205ENST00000476970 EIF4G2P78344 907 aaKnown RBP eCLIP9.78□□□□□ -0.84
PRPF3-205ENST00000476970 TCIRG1Q13488 830 aa9.78□□□□□ -0.84
PRPF3-205ENST00000476970 TTLL12Q14166 644 aaPredicted RBP9.78□□□□□ -0.84
PRPF3-205ENST00000476970 ANGEL2Q5VTE6 544 aaKnown RBP9.78□□□□□ -0.84
PRPF3-205ENST00000476970 TTLL7Q6ZT98 887 aa9.78□□□□□ -0.84
PRPF3-205ENST00000476970 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
PRPF3-205ENST00000476970 TMEM106CQ9BVX2 250 aa9.78□□□□□ -0.84
PRPF3-205ENST00000476970 TIMELESSQ9UNS1 1208 aa9.78□□□□□ -0.84
PRPF3-205ENST00000476970 ERBB4Q15303 1308 aa9.78□□□□□ -0.84
PRPF3-205ENST00000476970 RTL9Q8NET4 1388 aa9.77□□□□□ -0.84
PRPF3-205ENST00000476970 A0A0C4DFX4 3053 aa9.77□□□□□ -0.84
PRPF3-205ENST00000476970 MYL6BP14649 208 aa9.77□□□□□ -0.85
PRPF3-205ENST00000476970 MCM10Q7L590 875 aa9.77□□□□□ -0.85
PRPF3-205ENST00000476970 OTOP1Q7RTM1 612 aa9.77□□□□□ -0.85
PRPF3-205ENST00000476970 ERO1AQ96HE7 468 aa9.77□□□□□ -0.85
PRPF3-205ENST00000476970 RRP7AQ9Y3A4 280 aaKnown RBP9.77□□□□□ -0.85
PRPF3-205ENST00000476970 C6orf229H3BNL8 230 aa9.76□□□□□ -0.85
PRPF3-205ENST00000476970 HTATSF1O43719 755 aaKnown RBP9.76□□□□□ -0.85
PRPF3-205ENST00000476970 SCARF1Q14162 830 aa9.76□□□□□ -0.85
PRPF3-205ENST00000476970 TAF7Q15545 349 aaPredicted RBP9.76□□□□□ -0.85
PRPF3-205ENST00000476970 HSP90AB3PQ58FF7 597 aa9.76□□□□□ -0.85
PRPF3-205ENST00000476970 AGBL3Q8NEM8 1001 aa9.76□□□□□ -0.85
PRPF3-205ENST00000476970 PNISRQ8TF01 805 aaKnown RBP9.76□□□□□ -0.85
PRPF3-205ENST00000476970 ARMC5Q96C12 935 aa9.76□□□□□ -0.85
PRPF3-205ENST00000476970 NSFL1CQ9UNZ2 370 aaKnown RBP9.76□□□□□ -0.85
PRPF3-205ENST00000476970 G3V3G9 751 aa9.75□□□□□ -0.85
PRPF3-205ENST00000476970 UBE2Q2LH0YL09 131 aa9.75□□□□□ -0.85
PRPF3-205ENST00000476970 RIMBP2O15034 1052 aa9.75□□□□□ -0.85
PRPF3-205ENST00000476970 VIL1P09327 827 aaKnown RBP9.75□□□□□ -0.85
PRPF3-205ENST00000476970 EN2P19622 333 aaPredicted RBP9.75□□□□□ -0.85
PRPF3-205ENST00000476970 ZNF280AP59817 542 aaPredicted RBP9.75□□□□□ -0.85
PRPF3-205ENST00000476970 DCAF8Q5TAQ9 597 aa9.75□□□□□ -0.85
PRPF3-205ENST00000476970 PHACTR3Q96KR7 559 aa9.75□□□□□ -0.85
PRPF3-205ENST00000476970 RSPH6AQ9H0K4 717 aa9.75□□□□□ -0.85
PRPF3-205ENST00000476970 PTPN22Q9Y2R2 807 aa9.75□□□□□ -0.85
PRPF3-205ENST00000476970 DLG5Q8TDM6 1919 aa9.75□□□□□ -0.85
PRPF3-205ENST00000476970 ASTN2O75129 1339 aaPredicted RBP9.75□□□□□ -0.85
PRPF3-205ENST00000476970 SH3TC1Q8TE82 1336 aa9.75□□□□□ -0.85
PRPF3-205ENST00000476970 MANSC4A6NHS7 340 aaPredicted RBP9.74□□□□□ -0.85
PRPF3-205ENST00000476970 ATXN8OSP0DMR3 200 aa9.74□□□□□ -0.85
PRPF3-205ENST00000476970 HSPA5P11021 654 aaKnown RBP9.74□□□□□ -0.85
PRPF3-205ENST00000476970 INHBEP58166 350 aa9.74□□□□□ -0.85
PRPF3-205ENST00000476970 MKRN3Q13064 507 aaKnown RBP9.74□□□□□ -0.85
PRPF3-205ENST00000476970 MOB2Q70IA6 237 aa9.74□□□□□ -0.85
PRPF3-205ENST00000476970 ARMC9Q7Z3E5 817 aa9.74□□□□□ -0.85
PRPF3-205ENST00000476970 CFAP53Q96M91 514 aa9.74□□□□□ -0.85
PRPF3-205ENST00000476970 RANBP2P49792 3224 aaKnown RBP9.74□□□□□ -0.85
PRPF3-205ENST00000476970 COL6A3P12111 3177 aa9.73□□□□□ -0.85
PRPF3-205ENST00000476970 H0YGN5 161 aa9.73□□□□□ -0.85
PRPF3-205ENST00000476970 HCLS1P14317 486 aaPredicted RBP9.73□□□□□ -0.85
PRPF3-205ENST00000476970 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
PRPF3-205ENST00000476970 DOK7Q18PE1 504 aa9.73□□□□□ -0.85
PRPF3-205ENST00000476970 CC2D1BQ5T0F9 858 aaKnown RBP9.73□□□□□ -0.85
PRPF3-205ENST00000476970 RSBN1LQ6PCB5 846 aaPredicted RBP9.73□□□□□ -0.85
PRPF3-205ENST00000476970 NBPF11Q86T75 865 aa9.73□□□□□ -0.85
PRPF3-205ENST00000476970 OTUD5Q96G74 571 aa9.73□□□□□ -0.85
PRPF3-205ENST00000476970 ZC3H12CQ9C0D7 883 aaKnown RBP9.73□□□□□ -0.85
PRPF3-205ENST00000476970 EFCC1Q9HA90 598 aa9.73□□□□□ -0.85
PRPF3-205ENST00000476970 MYOZ2Q9NPC6 264 aa9.73□□□□□ -0.85
PRPF3-205ENST00000476970 TRMT112Q9UI30 125 aaKnown RBP9.73□□□□□ -0.85
PRPF3-205ENST00000476970 NUDCQ9Y266 331 aa9.73□□□□□ -0.85
PRPF3-205ENST00000476970 USP17L8P0C7I0 530 aa9.72□□□□□ -0.85
PRPF3-205ENST00000476970 DCTN1Q14203 1278 aa9.72□□□□□ -0.85
PRPF3-205ENST00000476970 ARHGEF6Q15052 776 aa9.72□□□□□ -0.85
PRPF3-205ENST00000476970 OTUD7BQ6GQQ9 843 aa9.72□□□□□ -0.85
PRPF3-205ENST00000476970 R3HDMLQ9H3Y0 253 aa9.72□□□□□ -0.85
PRPF3-205ENST00000476970 KCNQ5Q9NR82 932 aa9.72□□□□□ -0.85
PRPF3-205ENST00000476970 POLLQ9UGP5 575 aa9.72□□□□□ -0.85
PRPF3-205ENST00000476970 ZBTB48P10074 688 aaPredicted RBP9.71□□□□□ -0.86
PRPF3-205ENST00000476970 GPSM2P81274 684 aa9.71□□□□□ -0.86
PRPF3-205ENST00000476970 SLC4A8Q2Y0W8 1093 aa9.71□□□□□ -0.86
PRPF3-205ENST00000476970 SLC9C1Q4G0N8 1177 aa9.71□□□□□ -0.86
PRPF3-205ENST00000476970 SPRYD7Q5W111 196 aa9.71□□□□□ -0.86
PRPF3-205ENST00000476970 NLRP10Q86W26 655 aa9.71□□□□□ -0.86
PRPF3-205ENST00000476970 IFNL1Q8IU54 200 aa9.71□□□□□ -0.86
PRPF3-205ENST00000476970 TBC1D16Q8TBP0 767 aa9.71□□□□□ -0.86
PRPF3-205ENST00000476970 CD99L2Q8TCZ2 262 aa9.71□□□□□ -0.86
PRPF3-205ENST00000476970 ZNF333Q96JL9 665 aa9.71□□□□□ -0.86
PRPF3-205ENST00000476970 COL1A1P02452 1464 aaPredicted RBP9.71□□□□□ -0.86
PRPF3-205ENST00000476970 NEFMP07197 916 aa9.7□□□□□ -0.86
PRPF3-205ENST00000476970 EIF4A1P60842 406 aaKnown RBP9.7□□□□□ -0.86
PRPF3-205ENST00000476970 MIS18AQ9NYP9 233 aa9.7□□□□□ -0.86
PRPF3-205ENST00000476970 ZNF646O15015 1829 aaPredicted RBP9.7□□□□□ -0.86
PRPF3-205ENST00000476970 UFL1O94874 794 aa9.69□□□□□ -0.86
PRPF3-205ENST00000476970 U2AF1L5P0DN76 240 aaPredicted RBP9.69□□□□□ -0.86
PRPF3-205ENST00000476970 U2AF1Q01081 240 aaKnown RBP eCLIP9.69□□□□□ -0.86
PRPF3-205ENST00000476970 SP3Q02447 781 aa9.69□□□□□ -0.86
PRPF3-205ENST00000476970 PTPN12Q05209 780 aaKnown RBP9.69□□□□□ -0.86
PRPF3-205ENST00000476970 ECM29Q5VYK3 1845 aa9.69□□□□□ -0.86
PRPF3-205ENST00000476970 APOBEC3FQ8IUX4 373 aaKnown RBP9.69□□□□□ -0.86
PRPF3-205ENST00000476970 OGFOD1Q8N543 542 aa9.69□□□□□ -0.86
PRPF3-205ENST00000476970 CELF1Q92879 486 aaKnown RBP9.69□□□□□ -0.86
PRPF3-205ENST00000476970 PODXL2Q9NZ53 605 aa9.69□□□□□ -0.86
PRPF3-205ENST00000476970 ANKIB1Q9P2G1 1089 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms