RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 GOLGA6L9A6NEM1 432 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 LIMCH1Q9UPQ0 1083 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 GJB2P29033 226 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 NACA2Q9H009 215 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 ATP2A2P16615 1042 aaKnown RBP16.19■□□□□ 0.18
SSPO-205ENST00000475488 ARID5AQ03989 594 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 STMN4Q9H169 189 aaPredicted RBP16.19■□□□□ 0.18
SSPO-205ENST00000475488 RRAGBQ5VZM2 374 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 CCDC77Q9BR77 488 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 F6X3S4 739 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 N4BP3O15049 544 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 GOLGA1Q92805 767 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 BRPF3Q9ULD4 1205 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 GRIN2BQ13224 1484 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 THUMPD2Q9BTF0 503 aaKnown RBP16.18■□□□□ 0.18
SSPO-205ENST00000475488 PICK1Q9NRD5 415 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 UBAP1LF5GYI3 381 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 MCM5P33992 734 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
SSPO-205ENST00000475488 SLC8A3P57103 927 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 EP400NLQ6ZTU2 488 aa16.18■□□□□ 0.18
SSPO-205ENST00000475488 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
SSPO-205ENST00000475488 AKNAQ7Z591 1439 aa16.17■□□□□ 0.18
SSPO-205ENST00000475488 BACH1O14867 736 aa16.17■□□□□ 0.18
SSPO-205ENST00000475488 AKR1B10O60218 316 aa16.17■□□□□ 0.18
SSPO-205ENST00000475488 CCDC102BQ68D86 513 aa16.17■□□□□ 0.18
SSPO-205ENST00000475488 IFNL2Q8IZJ0 200 aa16.17■□□□□ 0.18
SSPO-205ENST00000475488 TTC36A6NLP5 189 aa16.17■□□□□ 0.18
SSPO-205ENST00000475488 NLRP3Q96P20 1036 aa16.17■□□□□ 0.18
SSPO-205ENST00000475488 AGTPBP1Q9UPW5 1226 aa16.17■□□□□ 0.18
SSPO-205ENST00000475488 RRP36Q96EU6 259 aaKnown RBP16.17■□□□□ 0.18
SSPO-205ENST00000475488 EPSTI1Q96J88 318 aa16.17■□□□□ 0.18
SSPO-205ENST00000475488 CYLC1P35663 651 aaPredicted RBP16.17■□□□□ 0.18
SSPO-205ENST00000475488 KIFC2Q96AC6 838 aa16.17■□□□□ 0.18
SSPO-205ENST00000475488 SNW1Q13573 536 aaKnown RBP16.16■□□□□ 0.18
SSPO-205ENST00000475488 RTN1Q16799 776 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 CCDC114Q96M63 670 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 PHF8Q9UPP1 1060 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 NAA16Q6N069 864 aaPredicted RBP16.16■□□□□ 0.18
SSPO-205ENST00000475488 DAPK1P53355 1430 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 TMOD4Q9NZQ9 345 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 RIOK3O14730 519 aaKnown RBP16.16■□□□□ 0.18
SSPO-205ENST00000475488 RIMBP2O15034 1052 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 KRT5P13647 590 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 ANKS4BQ8N8V4 417 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 NEK1Q96PY6 1258 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 CTAGE1Q96RT6 745 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 TRIM6Q9C030 488 aaPredicted RBP16.16■□□□□ 0.18
SSPO-205ENST00000475488 GNAQP50148 359 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 ESR2Q92731 530 aa16.16■□□□□ 0.18
SSPO-205ENST00000475488 C16orf45Q96MC5 204 aaPredicted RBP16.16■□□□□ 0.18
SSPO-205ENST00000475488 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 BRDTQ58F21 947 aaPredicted RBP16.15■□□□□ 0.18
SSPO-205ENST00000475488 TFIP11Q9UBB9 837 aaKnown RBP16.15■□□□□ 0.18
SSPO-205ENST00000475488 CAMSAP2Q08AD1 1489 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 MSH6P52701 1360 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 TRIM7Q9C029 511 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 CNNM2Q9H8M5 875 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 DDX19AQ9NUU7 478 aaKnown RBP16.15■□□□□ 0.18
SSPO-205ENST00000475488 MAGEB6P1A0A0J9YX57 407 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 E7EVH7 732 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 ZC3H12CQ9C0D7 883 aaKnown RBP16.15■□□□□ 0.18
SSPO-205ENST00000475488 RUSC2Q8N2Y8 1516 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 NEMFO60524 1076 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 HSPA4P34932 840 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 SYKP43405 635 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 GSDMBQ8TAX9 411 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 LMBR1Q8WVP7 490 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 DAPK3O43293 454 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 TBC1D31Q96DN5 1066 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 SELENOSQ9BQE4 189 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 PTPRCP08575 1304 aa16.15■□□□□ 0.18
SSPO-205ENST00000475488 TOM1O60784 492 aa16.14■□□□□ 0.17
SSPO-205ENST00000475488 RPUSD2Q8IZ73 545 aaKnown RBP16.14■□□□□ 0.17
SSPO-205ENST00000475488 DYNC1I1O14576 645 aa16.14■□□□□ 0.17
SSPO-205ENST00000475488 ZBTB43O43298 467 aa16.14■□□□□ 0.17
SSPO-205ENST00000475488 ASIC1P78348 528 aa16.14■□□□□ 0.17
SSPO-205ENST00000475488 TMTC2Q8N394 836 aa16.14■□□□□ 0.17
SSPO-205ENST00000475488 GPATCH11Q8N954 259 aa16.14■□□□□ 0.17
SSPO-205ENST00000475488 JARID2Q92833 1246 aaPredicted RBP16.14■□□□□ 0.17
SSPO-205ENST00000475488 IQSEC3Q9UPP2 1182 aaPredicted RBP16.14■□□□□ 0.17
SSPO-205ENST00000475488 KIAA1107Q9UPP5 1409 aa16.14■□□□□ 0.17
SSPO-205ENST00000475488 PTGS1P23219 599 aa16.14■□□□□ 0.17
SSPO-205ENST00000475488 MCM4P33991 863 aa16.14■□□□□ 0.17
SSPO-205ENST00000475488 RSPH3Q86UC2 560 aa16.14■□□□□ 0.17
SSPO-205ENST00000475488 HAUS2Q9NVX0 235 aa16.14■□□□□ 0.17
SSPO-205ENST00000475488 ZSWIM4Q9H7M6 989 aa16.13■□□□□ 0.17
SSPO-205ENST00000475488 UBASH3AP57075 661 aa16.13■□□□□ 0.17
SSPO-205ENST00000475488 PPFIA3O75145 1194 aa16.13■□□□□ 0.17
SSPO-205ENST00000475488 PPP1R7Q15435 360 aa16.13■□□□□ 0.17
SSPO-205ENST00000475488 AMOTL2Q9Y2J4 779 aa16.13■□□□□ 0.17
SSPO-205ENST00000475488 NIP7Q9Y221 180 aaKnown RBP eCLIP16.13■□□□□ 0.17
SSPO-205ENST00000475488 JAKMIP2Q96AA8 810 aa16.12■□□□□ 0.17
SSPO-205ENST00000475488 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
SSPO-205ENST00000475488 VPS52Q8N1B4 723 aa16.12■□□□□ 0.17
SSPO-205ENST00000475488 ALG1Q9BT22 464 aa16.12■□□□□ 0.17
SSPO-205ENST00000475488 BMP15O95972 392 aa16.12■□□□□ 0.17
SSPO-205ENST00000475488 ALDH1L2Q3SY69 923 aa16.12■□□□□ 0.17
SSPO-205ENST00000475488 IPO4Q8TEX9 1081 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms