RNA–Protein interactions for RNA: ENST00000472856.1

SOX2-OT-205, SOX2 overlapping transcript, humanhuman

TSL 2

Gene SOX2-OT, Length 454 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-205ENST00000472856 CEP89Q96ST8 783 aa9.31□□□□□ -0.92
SOX2-OT-205ENST00000472856 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
SOX2-OT-205ENST00000472856 UBP1Q9NZI7 540 aa9.31□□□□□ -0.92
SOX2-OT-205ENST00000472856 MSRB2Q9Y3D2 182 aa9.31□□□□□ -0.92
SOX2-OT-205ENST00000472856 TXLNAP40222 546 aa9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 TNNI3KQ59H18 835 aa9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 PCNX4Q63HM2 1172 aa9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 PDE12Q6L8Q7 609 aaKnown RBP9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 GALNT12Q8IXK2 581 aa9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 CELF2-AS1Q8N7Q2 184 aa9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 UBE2Q2Q8WVN8 375 aa9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 EMID1Q96A84 441 aaPredicted RBP9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 NIFKQ9BYG3 293 aaKnown RBP9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 FHDC1Q9C0D6 1143 aaPredicted RBP9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 ELP3Q9H9T3 547 aa9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 TMEM260Q9NX78 707 aa9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 SUPT16HQ9Y5B9 1047 aaKnown RBP9.3□□□□□ -0.92
SOX2-OT-205ENST00000472856 UBAP1LF5GYI3 381 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 TGFBR3LH3BV60 316 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 PRC1O43663 620 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 IDH3AP50213 366 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 CLN3Q13286 438 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 SQSTM1Q13501 440 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 CCDC81Q6ZN84 652 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 CMTR1Q8N1G2 835 aaKnown RBP9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 PGBD3Q8N328 593 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 RHPN1Q8TCX5 695 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 SGSM3Q96HU1 749 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 FEZ1Q99689 392 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 IL21Q9HBE4 155 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 HOMER2Q9NSB8 354 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 TMEM63CQ9P1W3 806 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 CNTN3Q9P232 1028 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 LEMD3Q9Y2U8 911 aa9.29□□□□□ -0.92
SOX2-OT-205ENST00000472856 EREGO14944 169 aa9.28□□□□□ -0.92
SOX2-OT-205ENST00000472856 PDPK1O15530 556 aa9.28□□□□□ -0.92
SOX2-OT-205ENST00000472856 MAP3K10Q02779 954 aa9.28□□□□□ -0.92
SOX2-OT-205ENST00000472856 APOBRQ0VD83 1088 aa9.28□□□□□ -0.92
SOX2-OT-205ENST00000472856 TKFCQ3LXA3 575 aa9.28□□□□□ -0.92
SOX2-OT-205ENST00000472856 PPARGC1BQ86YN6 1023 aaKnown RBP9.28□□□□□ -0.92
SOX2-OT-205ENST00000472856 C3orf58Q8NDZ4 430 aa9.28□□□□□ -0.92
SOX2-OT-205ENST00000472856 NKD1Q969G9 470 aa9.28□□□□□ -0.92
SOX2-OT-205ENST00000472856 SHDQ96IW2 340 aa9.28□□□□□ -0.92
SOX2-OT-205ENST00000472856 SPOCK3Q9BQ16 436 aa9.28□□□□□ -0.92
SOX2-OT-205ENST00000472856 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
SOX2-OT-205ENST00000472856 GREM1O60565 184 aa9.27□□□□□ -0.93
SOX2-OT-205ENST00000472856 EIF3JO75822 258 aaKnown RBP9.27□□□□□ -0.93
SOX2-OT-205ENST00000472856 TRIP4Q15650 581 aaPredicted RBP9.27□□□□□ -0.93
SOX2-OT-205ENST00000472856 HIF1AQ16665 826 aa9.27□□□□□ -0.93
SOX2-OT-205ENST00000472856 DDR2Q16832 855 aa9.27□□□□□ -0.93
SOX2-OT-205ENST00000472856 TLL2Q9Y6L7 1015 aa9.27□□□□□ -0.93
SOX2-OT-205ENST00000472856 MEN1O00255 615 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 PPEF1O14829 653 aaPredicted RBP9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 FBXO24O75426 580 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 TRIM37O94972 964 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 PF4P02776 101 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 RLBP1P12271 317 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 FCGRTP55899 365 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 EVA1CP58658 441 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 RASGRF1Q13972 1273 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 TJAP1Q5JTD0 557 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 TMEM214Q6NUQ4 689 aaKnown RBP9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 PHC3Q8NDX5 983 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 RHOVQ96L33 236 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 NLRP3Q96P20 1036 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 ZSCAN10Q96SZ4 725 aaPredicted RBP9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 EHD4Q9H223 541 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 KCNQ5Q9NR82 932 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 TCEAL9Q9UHQ7 104 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 PPT2Q9UMR5 302 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 TLR6Q9Y2C9 796 aa9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 RTCBQ9Y3I0 505 aaKnown RBP9.26□□□□□ -0.93
SOX2-OT-205ENST00000472856 ADH1AP07327 375 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 GARTP22102 1010 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 GTF2E1P29083 439 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 PTPN5P54829 565 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 SNAP47Q5SQN1 464 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 FAM169BQ8N8A8 192 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 C1orf127Q8N9H9 656 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 GOLM1Q8NBJ4 401 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 ZNF280CQ8ND82 737 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 GLIS3Q8NEA6 775 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 SUSD3Q96L08 255 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 CHRDQ9H2X0 955 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 GEMIN8Q9NWZ8 242 aaKnown RBP9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 TRAK1Q9UPV9 953 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 AKAP2Q9Y2D5 859 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 THRAP3Q9Y2W1 955 aaKnown RBP9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 EID1Q9Y6B2 187 aa9.25□□□□□ -0.93
SOX2-OT-205ENST00000472856 ADH1CP00326 375 aa9.24□□□□□ -0.93
SOX2-OT-205ENST00000472856 VIL1P09327 827 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-205ENST00000472856 CNGA1P29973 690 aa9.24□□□□□ -0.93
SOX2-OT-205ENST00000472856 ARSDP51689 593 aa9.24□□□□□ -0.93
SOX2-OT-205ENST00000472856 EIF6P56537 245 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-205ENST00000472856 RHBDL3P58872 404 aa9.24□□□□□ -0.93
SOX2-OT-205ENST00000472856 NR5A1Q13285 461 aa9.24□□□□□ -0.93
SOX2-OT-205ENST00000472856 BIRC2Q13490 618 aa9.24□□□□□ -0.93
SOX2-OT-205ENST00000472856 PRPF40BQ6NWY9 871 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-205ENST00000472856 ACTR10Q9NZ32 417 aa9.24□□□□□ -0.93
SOX2-OT-205ENST00000472856 MAPK8IP1Q9UQF2 711 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms