RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 GPRC5DQ9NZD1 345 aa24.61■■□□□ 1.53
COMMD1-208ENST00000472729 ANKRD18BA2A2Z9 1011 aa24.6■■□□□ 1.53
COMMD1-208ENST00000472729 H7C1D1 291 aa24.6■■□□□ 1.53
COMMD1-208ENST00000472729 ECE2O60344 883 aa24.6■■□□□ 1.53
COMMD1-208ENST00000472729 ALDH1L1O75891 902 aa24.6■■□□□ 1.53
COMMD1-208ENST00000472729 CNTROBQ8N137 903 aa24.6■■□□□ 1.53
COMMD1-208ENST00000472729 RTL9Q8NET4 1388 aa24.59■■□□□ 1.53
COMMD1-208ENST00000472729 DDX60Q8IY21 1712 aaKnown RBP24.59■■□□□ 1.53
COMMD1-208ENST00000472729 GRM8O00222 908 aa24.59■■□□□ 1.53
COMMD1-208ENST00000472729 IFIT5Q13325 482 aaKnown RBP24.59■■□□□ 1.53
COMMD1-208ENST00000472729 TAF7LQ5H9L4 462 aa24.59■■□□□ 1.53
COMMD1-208ENST00000472729 MAP1SQ66K74 1059 aaPredicted RBP24.59■■□□□ 1.53
COMMD1-208ENST00000472729 CDCA7LQ96GN5 454 aa24.59■■□□□ 1.53
COMMD1-208ENST00000472729 PTPRCP08575 1304 aa24.59■■□□□ 1.53
COMMD1-208ENST00000472729 FAM161AQ3B820 660 aa24.58■■□□□ 1.53
COMMD1-208ENST00000472729 KLRG1Q96E93 195 aa24.58■■□□□ 1.53
COMMD1-208ENST00000472729 GPR101Q96P66 508 aaPredicted RBP24.58■■□□□ 1.53
COMMD1-208ENST00000472729 ANKRD2Q9GZV1 360 aa24.58■■□□□ 1.53
COMMD1-208ENST00000472729 MINPP1Q9UNW1 487 aa24.58■■□□□ 1.53
COMMD1-208ENST00000472729 COL4A5P29400 1685 aa24.58■■□□□ 1.53
COMMD1-208ENST00000472729 KCNJ4P48050 445 aa24.57■■□□□ 1.52
COMMD1-208ENST00000472729 MRPL50Q8N5N7 158 aaKnown RBP24.57■■□□□ 1.52
COMMD1-208ENST00000472729 DNAJC5GQ8N7S2 189 aa24.57■■□□□ 1.52
COMMD1-208ENST00000472729 CREBZFQ9NS37 354 aa24.57■■□□□ 1.52
COMMD1-208ENST00000472729 SMC4Q9NTJ3 1288 aa24.57■■□□□ 1.52
COMMD1-208ENST00000472729 LAMB2P55268 1798 aa24.57■■□□□ 1.52
COMMD1-208ENST00000472729 YDJCA8MPS7 323 aa24.56■■□□□ 1.52
COMMD1-208ENST00000472729 PSMD14O00487 310 aa24.56■■□□□ 1.52
COMMD1-208ENST00000472729 CSF1RP07333 972 aa24.56■■□□□ 1.52
COMMD1-208ENST00000472729 CT47B1P0C2W7 299 aaPredicted RBP24.56■■□□□ 1.52
COMMD1-208ENST00000472729 CASP7P55210 303 aa24.56■■□□□ 1.52
COMMD1-208ENST00000472729 CCDC57Q2TAC2 916 aa24.56■■□□□ 1.52
COMMD1-208ENST00000472729 SSH1Q8WYL5 1049 aa24.56■■□□□ 1.52
COMMD1-208ENST00000472729 CNOT7Q9UIV1 285 aaKnown RBP24.56■■□□□ 1.52
COMMD1-208ENST00000472729 RPS12P25398 132 aaKnown RBP24.55■■□□□ 1.52
COMMD1-208ENST00000472729 ALDH1L2Q3SY69 923 aa24.55■■□□□ 1.52
COMMD1-208ENST00000472729 LMBR1LQ6UX01 489 aa24.54■■□□□ 1.52
COMMD1-208ENST00000472729 DPF2Q92785 391 aa24.54■■□□□ 1.52
COMMD1-208ENST00000472729 LEMD3Q9Y2U8 911 aa24.54■■□□□ 1.52
COMMD1-208ENST00000472729 ZBTB12Q9Y330 459 aaPredicted RBP24.54■■□□□ 1.52
COMMD1-208ENST00000472729 SCN4AP35499 1836 aa24.54■■□□□ 1.52
COMMD1-208ENST00000472729 CEP350Q5VT06 3117 aa24.53■■□□□ 1.52
COMMD1-208ENST00000472729 TMEM88BA6NKF7 163 aa24.53■■□□□ 1.52
COMMD1-208ENST00000472729 CCT4P50991 539 aaKnown RBP24.53■■□□□ 1.52
COMMD1-208ENST00000472729 MICALL2Q8IY33 904 aa24.53■■□□□ 1.52
COMMD1-208ENST00000472729 MIER1Q8N108 512 aa24.53■■□□□ 1.52
COMMD1-208ENST00000472729 ITGBL1O95965 494 aaPredicted RBP24.52■■□□□ 1.52
COMMD1-208ENST00000472729 PODNQ7Z5L7 613 aa24.52■■□□□ 1.52
COMMD1-208ENST00000472729 FOXO4P98177 505 aa24.51■■□□□ 1.51
COMMD1-208ENST00000472729 ZC3H15Q8WU90 426 aaKnown RBP24.5■■□□□ 1.51
COMMD1-208ENST00000472729 PASKQ96RG2 1323 aa24.5■■□□□ 1.51
COMMD1-208ENST00000472729 FBXW7Q969H0 707 aa24.49■■□□□ 1.51
COMMD1-208ENST00000472729 KCNQ5Q9NR82 932 aa24.49■■□□□ 1.51
COMMD1-208ENST00000472729 CNNM1Q9NRU3 951 aa24.49■■□□□ 1.51
COMMD1-208ENST00000472729 ZNF804BA4D1E1 1349 aa24.49■■□□□ 1.51
COMMD1-208ENST00000472729 DUOX1Q9NRD9 1551 aa24.49■■□□□ 1.51
COMMD1-208ENST00000472729 USP17L3A6NCW0 530 aa24.48■■□□□ 1.51
COMMD1-208ENST00000472729 USP17L4A6NCW7 530 aa24.48■■□□□ 1.51
COMMD1-208ENST00000472729 LRRC37AA6NMS7 1700 aa24.48■■□□□ 1.51
COMMD1-208ENST00000472729 VIL1P09327 827 aaKnown RBP24.48■■□□□ 1.51
COMMD1-208ENST00000472729 CHRNDQ07001 517 aa24.48■■□□□ 1.51
COMMD1-208ENST00000472729 RBM26Q5T8P6 1007 aaKnown RBP24.48■■□□□ 1.51
COMMD1-208ENST00000472729 LDHAL6AQ6ZMR3 332 aa24.48■■□□□ 1.51
COMMD1-208ENST00000472729 USP17L1Q7RTZ2 530 aa24.48■■□□□ 1.51
COMMD1-208ENST00000472729 TRMT2AQ8IZ69 625 aaKnown RBP24.48■■□□□ 1.51
COMMD1-208ENST00000472729 COA1Q9GZY4 146 aa24.48■■□□□ 1.51
COMMD1-208ENST00000472729 ABT1Q9ULW3 272 aaKnown RBP24.48■■□□□ 1.51
COMMD1-208ENST00000472729 MED23Q9ULK4 1368 aa24.47■■□□□ 1.51
COMMD1-208ENST00000472729 MKRN1Q9UHC7 482 aaKnown RBP24.47■■□□□ 1.51
COMMD1-208ENST00000472729 TAF1P21675 1872 aa24.47■■□□□ 1.51
COMMD1-208ENST00000472729 NBPF7P0C2Y1 421 aaPredicted RBP24.46■■□□□ 1.51
COMMD1-208ENST00000472729 HNRNPUQ00839 825 aaKnown RBP eCLIP24.46■■□□□ 1.51
COMMD1-208ENST00000472729 RSBN1LQ6PCB5 846 aaPredicted RBP24.46■■□□□ 1.51
COMMD1-208ENST00000472729 AGBL3Q8NEM8 1001 aa24.46■■□□□ 1.51
COMMD1-208ENST00000472729 PLIN1O60240 522 aa24.45■■□□□ 1.5
COMMD1-208ENST00000472729 TBC1D10BQ4KMP7 808 aaPredicted RBP24.45■■□□□ 1.5
COMMD1-208ENST00000472729 CDC37L1Q7L3B6 337 aa24.45■■□□□ 1.5
COMMD1-208ENST00000472729 SAMD7Q7Z3H4 446 aa24.45■■□□□ 1.5
COMMD1-208ENST00000472729 SUCLG2Q96I99 432 aa24.45■■□□□ 1.5
COMMD1-208ENST00000472729 API5Q9BZZ5 524 aaKnown RBP24.45■■□□□ 1.5
COMMD1-208ENST00000472729 COL4A1P02462 1669 aa24.45■■□□□ 1.5
COMMD1-208ENST00000472729 EPHA10Q5JZY3 1008 aa24.44■■□□□ 1.5
COMMD1-208ENST00000472729 OGFOD1Q8N543 542 aa24.44■■□□□ 1.5
COMMD1-208ENST00000472729 JMYQ8N9B5 988 aa24.44■■□□□ 1.5
COMMD1-208ENST00000472729 TRPM4Q8TD43 1214 aa24.44■■□□□ 1.5
COMMD1-208ENST00000472729 DCPSQ96C86 337 aaKnown RBP24.44■■□□□ 1.5
COMMD1-208ENST00000472729 NOB1Q9ULX3 412 aaKnown RBP24.44■■□□□ 1.5
COMMD1-208ENST00000472729 CACNA1FO60840 1977 aa24.43■■□□□ 1.5
COMMD1-208ENST00000472729 HELBQ8NG08 1087 aaPredicted RBP24.43■■□□□ 1.5
COMMD1-208ENST00000472729 HDAC5Q9UQL6 1122 aa24.43■■□□□ 1.5
COMMD1-208ENST00000472729 SHTN1A0MZ66 631 aa24.42■■□□□ 1.5
COMMD1-208ENST00000472729 WTIPA6NIX2 430 aaPredicted RBP24.42■■□□□ 1.5
COMMD1-208ENST00000472729 TAF5LO75529 589 aa24.42■■□□□ 1.5
COMMD1-208ENST00000472729 USP17L8P0C7I0 530 aa24.42■■□□□ 1.5
COMMD1-208ENST00000472729 KIF4BQ2VIQ3 1234 aa24.42■■□□□ 1.5
COMMD1-208ENST00000472729 PAXIP1Q6ZW49 1069 aaPredicted RBP24.42■■□□□ 1.5
COMMD1-208ENST00000472729 ZNF594Q96JF6 807 aaPredicted RBP24.42■■□□□ 1.5
COMMD1-208ENST00000472729 UTYO14607 1347 aa24.41■■□□□ 1.5
COMMD1-208ENST00000472729 TRAF5O00463 557 aa24.41■■□□□ 1.5
COMMD1-208ENST00000472729 HIRAP54198 1017 aaPredicted RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms