RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 NR5A1Q13285 461 aa7.81□□□□□ -1.16
SMNDC1-204ENST00000471297 ADAMTS19Q8TE59 1207 aa7.81□□□□□ -1.16
SMNDC1-204ENST00000471297 BABAM1Q9NWV8 329 aa7.81□□□□□ -1.16
SMNDC1-204ENST00000471297 LAS1LQ9Y4W2 734 aaKnown RBP7.81□□□□□ -1.16
SMNDC1-204ENST00000471297 LTN1O94822 1766 aa7.81□□□□□ -1.16
SMNDC1-204ENST00000471297 PLEKHG2Q9H7P9 1386 aa7.81□□□□□ -1.16
SMNDC1-204ENST00000471297 NCAPD2Q15021 1401 aa7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 FAM83GA6ND36 823 aa7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 ESPNB1AK53 854 aa7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 CHL1O00533 1208 aa7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 CSB-PGBD3P0DP91 1061 aa7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 PDE3AQ14432 1141 aa7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 ALDH1L2Q3SY69 923 aa7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 PHTF2Q8N3S3 785 aa7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 GLMNQ92990 594 aa7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 TSR2Q969E8 191 aaKnown RBP7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 NHSL1Q5SYE7 1610 aa7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 KIAA0232Q92628 1395 aa7.8□□□□□ -1.16
SMNDC1-204ENST00000471297 NRG2O14511 850 aaPredicted RBP7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 PLIN1O60240 522 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 BCAR3O75815 825 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 TATP17735 454 aaPredicted RBP7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 FSHRP23945 695 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 RAB15P59190 212 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 DCTN1Q14203 1278 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 SLFNL1Q499Z3 407 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 AKAP4Q5JQC9 854 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 INTS6LQ5JSJ4 861 aaKnown RBP7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 RNF20Q5VTR2 975 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 MCM10Q7L590 875 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 USHBP1Q8N6Y0 703 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 THUMPD2Q9BTF0 503 aaKnown RBP7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 IRX2Q9BZI1 471 aaPredicted RBP7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 PRDM11Q9NQV5 511 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 MBIPQ9NS73 344 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 NLRP2Q9NX02 1062 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 MAP3K5Q99683 1374 aa7.79□□□□□ -1.16
SMNDC1-204ENST00000471297 AHDC1Q5TGY3 1603 aaPredicted RBP7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 IPO8O15397 1037 aaKnown RBP7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 VAMP4O75379 141 aa7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 CANXP27824 592 aaKnown RBP7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 NNTQ13423 1086 aa7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 AAMPQ13685 434 aa7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 LAPTM4AQ15012 233 aa7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 CHRNA2Q15822 529 aa7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 C1orf141Q5JVX7 400 aa7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 SEPT12Q8IYM1 358 aa7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 RAPGEF4Q8WZA2 1011 aa7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 SPG7Q9UQ90 795 aa7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 CRB1P82279 1406 aa7.78□□□□□ -1.16
SMNDC1-204ENST00000471297 FAM187AA6NFU0 413 aa7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 NR3C2P08235 984 aa7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 EVA1CP58658 441 aa7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 TAF7Q15545 349 aaPredicted RBP7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 TWISTNBQ3B726 338 aaPredicted RBP7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 TSGA10IPQ3SY00 556 aa7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 ZNF530Q6P9A1 599 aaPredicted RBP7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 RNF135Q8IUD6 432 aa7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 CCDC116Q8IYX3 515 aa7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 IL17REQ8NFR9 667 aa7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 EXOC6Q8TAG9 804 aa7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 HPS1Q92902 700 aa7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 CRYBG1Q9Y4K1 1723 aa7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 SOS1Q07889 1333 aaPredicted RBP7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 WDR17Q8IZU2 1322 aa7.77□□□□□ -1.17
SMNDC1-204ENST00000471297 COL18A1P39060 1754 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 ERVH48-1M5A8F1 160 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 DHX9Q08211 1270 aaKnown RBP7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 ZKSCAN2Q63HK3 967 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 CCDC125Q86Z20 511 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 SSH1Q8WYL5 1049 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 ARHGAP45Q92619 1136 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 CCDC136Q96JN2 1154 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 CRBNQ96SW2 442 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 CARD10Q9BWT7 1032 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 CHMP4AQ9BY43 222 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 SMC4Q9NTJ3 1288 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 TSPYL4Q9UJ04 414 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 ROBO1Q9Y6N7 1651 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 CAMTA1Q9Y6Y1 1673 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 KIF16BQ96L93 1317 aa7.76□□□□□ -1.17
SMNDC1-204ENST00000471297 CEMIPQ8WUJ3 1361 aa7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 UBAP1LF5GYI3 381 aa7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 PIK3CDO00329 1044 aa7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 RNMTO43148 476 aaKnown RBP7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 DGAT1O75907 488 aa7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 HSP90AB1P08238 724 aaKnown RBP7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 PKDCCQ504Y2 493 aa7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 PPP1R26Q5T8A7 1209 aaPredicted RBP7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 TOM1L2Q6ZVM7 507 aa7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 C8orf58Q8NAV2 365 aa7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 FRAT1Q92837 279 aaPredicted RBP7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 CCDC85AQ96PX6 553 aaPredicted RBP7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 TMPRSS4Q9NRS4 437 aa7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 DLG5Q8TDM6 1919 aa7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 LMO7Q8WWI1 1683 aa7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 FAM208AQ9UK61 1670 aaKnown RBP7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 OVOS2A0A0G2JMS6 1433 aa7.75□□□□□ -1.17
SMNDC1-204ENST00000471297 SKIP12755 728 aa7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 TEFQ10587 303 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms