RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 QTRT2Q9H974 415 aaKnown RBP7.74□□□□□ -1.17
SSB-208ENST00000468600 PRR19A6NJB7 356 aa7.73□□□□□ -1.17
SSB-208ENST00000468600 J3QW42 95 aa7.73□□□□□ -1.17
SSB-208ENST00000468600 XYLBO75191 536 aa7.73□□□□□ -1.17
SSB-208ENST00000468600 EGFRP00533 1210 aa7.73□□□□□ -1.17
SSB-208ENST00000468600 C8AP07357 584 aa7.73□□□□□ -1.17
SSB-208ENST00000468600 PTK7Q13308 1070 aa7.73□□□□□ -1.17
SSB-208ENST00000468600 CRTC2Q53ET0 693 aaPredicted RBP7.73□□□□□ -1.17
SSB-208ENST00000468600 PROSER2Q86WR7 435 aaPredicted RBP7.73□□□□□ -1.17
SSB-208ENST00000468600 ANKMY2Q8IV38 441 aa7.73□□□□□ -1.17
SSB-208ENST00000468600 CMTR1Q8N1G2 835 aaKnown RBP7.73□□□□□ -1.17
SSB-208ENST00000468600 NSUN5Q96P11 429 aaKnown RBP7.73□□□□□ -1.17
SSB-208ENST00000468600 UBL7Q96S82 380 aaPredicted RBP7.73□□□□□ -1.17
SSB-208ENST00000468600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.73□□□□□ -1.17
SSB-208ENST00000468600 STOML1Q9UBI4 398 aa7.73□□□□□ -1.17
SSB-208ENST00000468600 USP17L15C9J2P7 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 USP17L10C9JJH3 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 USP17L13C9JLJ4 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 USP17L12C9JPN9 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 USP17L11C9JVI0 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 USP17L21D6R901 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 USP17L18D6R9N7 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 USP17L22D6RA61 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 USP17L17D6RBQ6 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 USP17L19D6RCP7 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 USP17L20D6RJB6 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 WNT11O96014 354 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 SOX18P35713 384 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 USP17L24Q0WX57 530 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 SETDB1Q15047 1291 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 RGL4Q8IZJ4 473 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 CACTIN-AS1Q8N1I8 211 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 GLMNQ92990 594 aa7.72□□□□□ -1.17
SSB-208ENST00000468600 FAM196BA6NMK8 535 aa7.71□□□□□ -1.18
SSB-208ENST00000468600 DHX15O43143 795 aaKnown RBP7.71□□□□□ -1.18
SSB-208ENST00000468600 GRIK1P39086 918 aa7.71□□□□□ -1.18
SSB-208ENST00000468600 NFIAQ12857 509 aa7.71□□□□□ -1.18
SSB-208ENST00000468600 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.71□□□□□ -1.18
SSB-208ENST00000468600 ARMC10Q8N2F6 343 aa7.71□□□□□ -1.18
SSB-208ENST00000468600 CLUAP1Q96AJ1 413 aa7.71□□□□□ -1.18
SSB-208ENST00000468600 CEP41Q9BYV8 373 aa7.71□□□□□ -1.18
SSB-208ENST00000468600 USP20Q9Y2K6 914 aa7.71□□□□□ -1.18
SSB-208ENST00000468600 A6NJR5 290 aa7.7□□□□□ -1.18
SSB-208ENST00000468600 MMP20O60882 483 aa7.7□□□□□ -1.18
SSB-208ENST00000468600 HOXD8P13378 290 aaPredicted RBP7.7□□□□□ -1.18
SSB-208ENST00000468600 POU5F2Q8N7G0 328 aa7.7□□□□□ -1.18
SSB-208ENST00000468600 KRTAP17-1Q9BYP8 105 aa7.7□□□□□ -1.18
SSB-208ENST00000468600 OPLAHO14841 1288 aa7.69□□□□□ -1.18
SSB-208ENST00000468600 TREML1Q86YW5 311 aa7.69□□□□□ -1.18
SSB-208ENST00000468600 ABI1Q8IZP0 508 aa7.69□□□□□ -1.18
SSB-208ENST00000468600 TRIM33Q9UPN9 1127 aa7.69□□□□□ -1.18
SSB-208ENST00000468600 PPME1Q9Y570 386 aa7.69□□□□□ -1.18
SSB-208ENST00000468600 WEE1P30291 646 aa7.68□□□□□ -1.18
SSB-208ENST00000468600 UVSSAQ2YD98 709 aa7.68□□□□□ -1.18
SSB-208ENST00000468600 C7orf69Q9H7B7 122 aa7.68□□□□□ -1.18
SSB-208ENST00000468600 ACAD11Q709F0 780 aa7.67□□□□□ -1.18
SSB-208ENST00000468600 UTP4Q969X6 686 aaKnown RBP7.67□□□□□ -1.18
SSB-208ENST00000468600 PPP1R12CQ9BZL4 782 aa7.67□□□□□ -1.18
SSB-208ENST00000468600 VRTNQ9H8Y1 702 aa7.67□□□□□ -1.18
SSB-208ENST00000468600 KANK4Q5T7N3 995 aaPredicted RBP7.66□□□□□ -1.18
SSB-208ENST00000468600 RNF43Q68DV7 783 aa7.66□□□□□ -1.18
SSB-208ENST00000468600 TRIM42Q8IWZ5 723 aa7.66□□□□□ -1.18
SSB-208ENST00000468600 DBNDD2Q9BQY9 259 aa7.66□□□□□ -1.18
SSB-208ENST00000468600 KCNMB2Q9Y691 235 aa7.66□□□□□ -1.18
SSB-208ENST00000468600 CD68P34810 354 aaPredicted RBP7.65□□□□□ -1.18
SSB-208ENST00000468600 NLRP13Q86W25 1043 aa7.65□□□□□ -1.18
SSB-208ENST00000468600 SPACA7Q96KW9 195 aa7.65□□□□□ -1.18
SSB-208ENST00000468600 CALR3Q96L12 384 aaKnown RBP7.65□□□□□ -1.18
SSB-208ENST00000468600 LRFN2Q9ULH4 789 aa7.65□□□□□ -1.18
SSB-208ENST00000468600 HMX2A2RU54 273 aa7.64□□□□□ -1.19
SSB-208ENST00000468600 LINC01387J3KSC0 135 aa7.64□□□□□ -1.19
SSB-208ENST00000468600 WISP1O95388 367 aa7.64□□□□□ -1.19
SSB-208ENST00000468600 FAM117BQ6P1L5 589 aa7.64□□□□□ -1.19
SSB-208ENST00000468600 SMNDC1O75940 238 aaKnown RBP eCLIP7.63□□□□□ -1.19
SSB-208ENST00000468600 LMOD1P29536 600 aaPredicted RBP7.63□□□□□ -1.19
SSB-208ENST00000468600 CBLL1Q75N03 491 aa7.63□□□□□ -1.19
SSB-208ENST00000468600 GALNT11Q8NCW6 608 aa7.63□□□□□ -1.19
SSB-208ENST00000468600 LACRTQ9GZZ8 138 aa7.63□□□□□ -1.19
SSB-208ENST00000468600 FAM177BA6PVY3 158 aa7.62□□□□□ -1.19
SSB-208ENST00000468600 CDC27P30260 824 aa7.62□□□□□ -1.19
SSB-208ENST00000468600 HYAL2Q12891 473 aa7.62□□□□□ -1.19
SSB-208ENST00000468600 CEP135Q66GS9 1140 aa7.62□□□□□ -1.19
SSB-208ENST00000468600 TXNDC11Q6PKC3 985 aa7.62□□□□□ -1.19
SSB-208ENST00000468600 FAM46AQ96IP4 442 aaKnown RBP7.62□□□□□ -1.19
SSB-208ENST00000468600 ARXQ96QS3 562 aa7.62□□□□□ -1.19
SSB-208ENST00000468600 FAM13BQ9NYF5 915 aa7.62□□□□□ -1.19
SSB-208ENST00000468600 KRTAP9-7A8MTY7 169 aa7.61□□□□□ -1.19
SSB-208ENST00000468600 HOXA10P31260 410 aaPredicted RBP7.61□□□□□ -1.19
SSB-208ENST00000468600 DUOXA2Q1HG44 320 aa7.61□□□□□ -1.19
SSB-208ENST00000468600 KLHL23Q8NBE8 558 aa7.61□□□□□ -1.19
SSB-208ENST00000468600 OR13H1Q8NG92 308 aa7.61□□□□□ -1.19
SSB-208ENST00000468600 SHKBP1Q8TBC3 707 aa7.61□□□□□ -1.19
SSB-208ENST00000468600 FAM200AQ8TCP9 573 aa7.61□□□□□ -1.19
SSB-208ENST00000468600 MYRFLQ96LU7 910 aa7.61□□□□□ -1.19
SSB-208ENST00000468600 UBAP1LF5GYI3 381 aa7.6□□□□□ -1.19
SSB-208ENST00000468600 SART1O43290 800 aaKnown RBP7.6□□□□□ -1.19
SSB-208ENST00000468600 BRD2P25440 801 aaKnown RBP7.6□□□□□ -1.19
SSB-208ENST00000468600 TRIP4Q15650 581 aaPredicted RBP7.6□□□□□ -1.19
SSB-208ENST00000468600 COX20Q5RI15 118 aa7.6□□□□□ -1.19
SSB-208ENST00000468600 NFXL1Q6ZNB6 911 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms