RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.84□□□□□ -0.67
TMEM254-209ENST00000467529 BCL2L12Q9HB09 334 aa10.84□□□□□ -0.67
TMEM254-209ENST00000467529 PAG1Q9NWQ8 432 aa10.84□□□□□ -0.67
TMEM254-209ENST00000467529 TAF1LQ8IZX4 1826 aa10.84□□□□□ -0.67
TMEM254-209ENST00000467529 GNPATO15228 680 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 CHGBP05060 677 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 ATP2B3Q16720 1220 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 CCDC158Q5M9N0 1113 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 GORABQ5T7V8 394 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 ZNF589Q86UQ0 364 aaPredicted RBP10.83□□□□□ -0.68
TMEM254-209ENST00000467529 MAP4K1Q92918 833 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 KCNB2Q92953 911 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 CIZ1Q9ULV3 898 aaPredicted RBP10.83□□□□□ -0.68
TMEM254-209ENST00000467529 RGL2O15211 777 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 HSP90B1P14625 803 aaKnown RBP10.83□□□□□ -0.68
TMEM254-209ENST00000467529 MCM2P49736 904 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 NECTIN1Q15223 517 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 TTC39AQ5SRH9 613 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 USPL1Q5W0Q7 1092 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 PRPF40BQ6NWY9 871 aaKnown RBP10.83□□□□□ -0.68
TMEM254-209ENST00000467529 UPF3BQ9BZI7 483 aaKnown RBP10.83□□□□□ -0.68
TMEM254-209ENST00000467529 SEC31BQ9NQW1 1179 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 PODXL2Q9NZ53 605 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 SRP68Q9UHB9 627 aaKnown RBP10.83□□□□□ -0.68
TMEM254-209ENST00000467529 NARFQ9UHQ1 456 aa10.83□□□□□ -0.68
TMEM254-209ENST00000467529 RBM8AQ9Y5S9 174 aaKnown RBP10.83□□□□□ -0.68
TMEM254-209ENST00000467529 SPEF2Q9C093 1822 aa10.82□□□□□ -0.68
TMEM254-209ENST00000467529 PDE8BO95263 885 aa10.82□□□□□ -0.68
TMEM254-209ENST00000467529 CCDC152Q4G0S7 254 aa10.82□□□□□ -0.68
TMEM254-209ENST00000467529 TBC1D9BQ66K14 1250 aa10.82□□□□□ -0.68
TMEM254-209ENST00000467529 BCL11BQ9C0K0 894 aaPredicted RBP10.82□□□□□ -0.68
TMEM254-209ENST00000467529 RTL9Q8NET4 1388 aa10.82□□□□□ -0.68
TMEM254-209ENST00000467529 TAF5LO75529 589 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 ERFEQ4G0M1 354 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 BICDL1Q6ZP65 573 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 AMIGO3Q86WK7 504 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 IL27Q8NEV9 243 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 SEC62Q99442 399 aaKnown RBP10.81□□□□□ -0.68
TMEM254-209ENST00000467529 RTCBQ9Y3I0 505 aaKnown RBP10.81□□□□□ -0.68
TMEM254-209ENST00000467529 MROH5Q6ZUA9 1318 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 C4BP0C0L5 1744 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 KCNJ4P48050 445 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 SCARF1Q14162 830 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 MCMDC2Q4G0Z9 681 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 CREB3L3Q68CJ9 461 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 CCDC129Q6ZRS4 1044 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 TICAM2Q86XR7 235 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 HELBQ8NG08 1087 aaPredicted RBP10.81□□□□□ -0.68
TMEM254-209ENST00000467529 TMX3Q96JJ7 454 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 BRWD3Q6RI45 1802 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 ABCC12Q96J65 1359 aa10.81□□□□□ -0.68
TMEM254-209ENST00000467529 SLC27A2O14975 620 aa10.8□□□□□ -0.68
TMEM254-209ENST00000467529 ZPR1O75312 459 aa10.8□□□□□ -0.68
TMEM254-209ENST00000467529 FKBP4Q02790 459 aaKnown RBP eCLIP10.8□□□□□ -0.68
TMEM254-209ENST00000467529 SLFNL1Q499Z3 407 aa10.8□□□□□ -0.68
TMEM254-209ENST00000467529 NOL8Q76FK4 1167 aaKnown RBP10.8□□□□□ -0.68
TMEM254-209ENST00000467529 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
TMEM254-209ENST00000467529 TTC14Q96N46 770 aa10.8□□□□□ -0.68
TMEM254-209ENST00000467529 MPHOSPH8Q99549 860 aa10.8□□□□□ -0.68
TMEM254-209ENST00000467529 CASZ1Q86V15 1759 aa10.8□□□□□ -0.68
TMEM254-209ENST00000467529 RNF113AO15541 343 aaKnown RBP10.79□□□□□ -0.68
TMEM254-209ENST00000467529 FGFR2P21802 821 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 RAB3GAP1Q15042 981 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 PUM3Q15397 648 aaKnown RBP10.79□□□□□ -0.68
TMEM254-209ENST00000467529 ADCK5Q3MIX3 580 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 ZMYM1Q5SVZ6 1142 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 C3orf67Q6ZVT6 689 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 KRT27Q7Z3Y8 459 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 ZGPATQ8N5A5 531 aaKnown RBP10.79□□□□□ -0.68
TMEM254-209ENST00000467529 HELLSQ9NRZ9 838 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 LRRC4BQ9NT99 713 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 C4AP0C0L4 1744 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 COL24A1Q17RW2 1714 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 ARAP2Q8WZ64 1704 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 CPA1P15085 419 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 ZKSCAN1P17029 563 aaPredicted RBP10.79□□□□□ -0.68
TMEM254-209ENST00000467529 CASTP20810 708 aaKnown RBP10.79□□□□□ -0.68
TMEM254-209ENST00000467529 SSFA2P28290 1259 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 IGHMBP2P38935 993 aaKnown RBP10.79□□□□□ -0.68
TMEM254-209ENST00000467529 ZAP70P43403 619 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 CUL4AQ13619 759 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 SLC10A5Q5PT55 438 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 FAM196AQ6ZSG2 479 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 LPIN2Q92539 896 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 ZNF512BQ96KM6 892 aaPredicted RBP10.79□□□□□ -0.68
TMEM254-209ENST00000467529 JAKMIP1Q96N16 626 aaKnown RBP10.79□□□□□ -0.68
TMEM254-209ENST00000467529 SETDB2Q96T68 719 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 TM6SF1Q9BZW5 370 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 CWC22Q9HCG8 908 aaKnown RBP10.79□□□□□ -0.68
TMEM254-209ENST00000467529 COL4A1P02462 1669 aa10.79□□□□□ -0.68
TMEM254-209ENST00000467529 AKAP11Q9UKA4 1901 aa10.78□□□□□ -0.68
TMEM254-209ENST00000467529 MCAMP43121 646 aa10.78□□□□□ -0.68
TMEM254-209ENST00000467529 SF3B3Q15393 1217 aaKnown RBP10.78□□□□□ -0.68
TMEM254-209ENST00000467529 PI16Q6UXB8 463 aa10.78□□□□□ -0.68
TMEM254-209ENST00000467529 TNPO1Q92973 898 aaKnown RBP10.78□□□□□ -0.68
TMEM254-209ENST00000467529 NYXQ9GZU5 481 aa10.78□□□□□ -0.68
TMEM254-209ENST00000467529 ZSWIM6Q9HCJ5 1215 aa10.78□□□□□ -0.68
TMEM254-209ENST00000467529 PHF14O94880 888 aa10.77□□□□□ -0.68
TMEM254-209ENST00000467529 SLC5A1P13866 664 aa10.77□□□□□ -0.68
TMEM254-209ENST00000467529 GTF2E1P29083 439 aaPredicted RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms