RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 GOLGA6L4A6NEF3 574 aa17.74■□□□□ 0.43
GAPDH-206ENST00000466525 TOB2Q14106 344 aaPredicted RBP17.74■□□□□ 0.43
GAPDH-206ENST00000466525 PPP4R3BQ5MIZ7 849 aa17.74■□□□□ 0.43
GAPDH-206ENST00000466525 ATL3Q6DD88 541 aa17.74■□□□□ 0.43
GAPDH-206ENST00000466525 NECAB1Q8N987 351 aa17.74■□□□□ 0.43
GAPDH-206ENST00000466525 DACT1Q9NYF0 836 aa17.74■□□□□ 0.43
GAPDH-206ENST00000466525 CPDO75976 1380 aa17.74■□□□□ 0.43
GAPDH-206ENST00000466525 COL15A1P39059 1388 aa17.74■□□□□ 0.43
GAPDH-206ENST00000466525 RGPD2P0DJD1 1756 aa17.73■□□□□ 0.43
GAPDH-206ENST00000466525 BTBD11A6QL63 1104 aa17.73■□□□□ 0.43
GAPDH-206ENST00000466525 SASH1O94885 1247 aa17.73■□□□□ 0.43
GAPDH-206ENST00000466525 PTGS1P23219 599 aa17.73■□□□□ 0.43
GAPDH-206ENST00000466525 KCNJ4P48050 445 aa17.73■□□□□ 0.43
GAPDH-206ENST00000466525 TEFQ10587 303 aa17.73■□□□□ 0.43
GAPDH-206ENST00000466525 ANO6Q4KMQ2 910 aa17.73■□□□□ 0.43
GAPDH-206ENST00000466525 PLEKHO1Q53GL0 409 aaPredicted RBP17.73■□□□□ 0.43
GAPDH-206ENST00000466525 MPNDQ8N594 471 aa17.73■□□□□ 0.43
GAPDH-206ENST00000466525 KCND1Q9NSA2 647 aa17.73■□□□□ 0.43
GAPDH-206ENST00000466525 GRM8O00222 908 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 PLCB2Q00722 1185 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 G3BP1Q13283 466 aaKnown RBP eCLIP17.72■□□□□ 0.433e-47■□□□□ 11.1
GAPDH-206ENST00000466525 ABTB2Q8N961 1025 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 LLPHQ9BRT6 129 aaKnown RBP17.72■□□□□ 0.43
GAPDH-206ENST00000466525 CFAP45Q9UL16 551 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 MAP3K2Q9Y2U5 619 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 DDX58O95786 925 aaKnown RBP17.72■□□□□ 0.43
GAPDH-206ENST00000466525 RESTQ13127 1097 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 NUP188Q5SRE5 1749 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 ZSCAN25Q6NSZ9 544 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 LUZP1Q86V48 1076 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 SPC24Q8NBT2 197 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 GTF3C6Q969F1 213 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 MRFAP1L1Q96HT8 127 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 FAM227BQ96M60 508 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 LGR6Q9HBX8 967 aa17.72■□□□□ 0.43
GAPDH-206ENST00000466525 LARP1Q6PKG0 1096 aaKnown RBP17.71■□□□□ 0.43
GAPDH-206ENST00000466525 CCDC186Q7Z3E2 898 aa17.71■□□□□ 0.43
GAPDH-206ENST00000466525 KCNH5Q8NCM2 988 aa17.71■□□□□ 0.43
GAPDH-206ENST00000466525 EAF2Q96CJ1 260 aaPredicted RBP17.71■□□□□ 0.43
GAPDH-206ENST00000466525 A0A0D9SFI3 127 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 RNMTO43148 476 aaKnown RBP17.69■□□□□ 0.42
GAPDH-206ENST00000466525 ZNF165P49910 485 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 ATP2B3Q16720 1220 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 SMARCC2Q8TAQ2 1214 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 TSC1Q92574 1164 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 KAZALD1Q96I82 304 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 OGFRQ9NZT2 677 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 CGNQ9P2M7 1197 aaKnown RBP17.69■□□□□ 0.42
GAPDH-206ENST00000466525 TAF5LO75529 589 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 NBPF6Q5VWK0 638 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 NAA16Q6N069 864 aaPredicted RBP17.69■□□□□ 0.42
GAPDH-206ENST00000466525 JARID2Q92833 1246 aaPredicted RBP17.69■□□□□ 0.42
GAPDH-206ENST00000466525 PGBD1Q96JS3 809 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 NBPF4Q96M43 638 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 FSD1Q9BTV5 496 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 TRIM5Q9C035 493 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 DDX21Q9NR30 783 aaKnown RBP eCLIP17.69■□□□□ 0.42
GAPDH-206ENST00000466525 U3KPZ7 1027 aaPredicted RBP17.69■□□□□ 0.42
GAPDH-206ENST00000466525 SLIT3O75094 1523 aa17.69■□□□□ 0.42
GAPDH-206ENST00000466525 LAMA4Q16363 1823 aa17.68■□□□□ 0.42
GAPDH-206ENST00000466525 ATP5JP18859 108 aa17.68■□□□□ 0.42
GAPDH-206ENST00000466525 NCBP1Q09161 790 aaKnown RBP17.68■□□□□ 0.42
GAPDH-206ENST00000466525 IQCB1Q15051 598 aa17.68■□□□□ 0.42
GAPDH-206ENST00000466525 SUCLG2Q96I99 432 aa17.68■□□□□ 0.42
GAPDH-206ENST00000466525 PA2G4Q9UQ80 394 aaKnown RBP17.68■□□□□ 0.42
GAPDH-206ENST00000466525 KCNQ3O43525 872 aa17.67■□□□□ 0.42
GAPDH-206ENST00000466525 HMGB1P09429 215 aaKnown RBP17.67■□□□□ 0.42
GAPDH-206ENST00000466525 DHX8Q14562 1220 aaKnown RBP17.67■□□□□ 0.42
GAPDH-206ENST00000466525 ZNF530Q6P9A1 599 aaPredicted RBP17.67■□□□□ 0.42
GAPDH-206ENST00000466525 FERMT3Q86UX7 667 aa17.67■□□□□ 0.42
GAPDH-206ENST00000466525 RCOR1Q9UKL0 485 aa17.67■□□□□ 0.42
GAPDH-206ENST00000466525 NR1I2O75469 434 aa17.67■□□□□ 0.42
GAPDH-206ENST00000466525 TNNT1P13805 278 aa17.67■□□□□ 0.42
GAPDH-206ENST00000466525 CAMK4Q16566 473 aa17.67■□□□□ 0.42
GAPDH-206ENST00000466525 NUTM2GQ5VZR2 741 aa17.67■□□□□ 0.42
GAPDH-206ENST00000466525 LTV1Q96GA3 475 aaPredicted RBP17.67■□□□□ 0.42
GAPDH-206ENST00000466525 CDCA7Q9BWT1 371 aaPredicted RBP17.67■□□□□ 0.42
GAPDH-206ENST00000466525 BCL11BQ9C0K0 894 aaPredicted RBP17.67■□□□□ 0.42
GAPDH-206ENST00000466525 CLIP2Q9UDT6 1046 aa17.67■□□□□ 0.42
GAPDH-206ENST00000466525 PLEKHG2Q9H7P9 1386 aa17.66■□□□□ 0.42
GAPDH-206ENST00000466525 KIF2AO00139 706 aaPredicted RBP17.66■□□□□ 0.42
GAPDH-206ENST00000466525 GCP02774 474 aa17.66■□□□□ 0.42
GAPDH-206ENST00000466525 GABPB1Q06547 395 aaPredicted RBP17.66■□□□□ 0.42
GAPDH-206ENST00000466525 STX1AQ16623 288 aa17.66■□□□□ 0.42
GAPDH-206ENST00000466525 DRC7Q8IY82 874 aa17.66■□□□□ 0.42
GAPDH-206ENST00000466525 CKAP2LQ8IYA6 745 aa17.66■□□□□ 0.42
GAPDH-206ENST00000466525 USHBP1Q8N6Y0 703 aa17.66■□□□□ 0.42
GAPDH-206ENST00000466525 NEK1Q96PY6 1258 aa17.66■□□□□ 0.42
GAPDH-206ENST00000466525 BICC1Q9H694 974 aaKnown RBP17.66■□□□□ 0.42
GAPDH-206ENST00000466525 COPRSQ9NQ92 184 aa17.66■□□□□ 0.42
GAPDH-206ENST00000466525 RGPD3A6NKT7 1758 aaPredicted RBP17.65■□□□□ 0.42
GAPDH-206ENST00000466525 RGPD4Q7Z3J3 1758 aa17.65■□□□□ 0.42
GAPDH-206ENST00000466525 CBX1P83916 185 aa17.65■□□□□ 0.42
GAPDH-206ENST00000466525 CCDC112Q8NEF3 446 aa17.65■□□□□ 0.42
GAPDH-206ENST00000466525 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
GAPDH-206ENST00000466525 ABCC6O95255 1503 aa17.65■□□□□ 0.42
GAPDH-206ENST00000466525 SPEF2Q9C093 1822 aa17.64■□□□□ 0.42
GAPDH-206ENST00000466525 DDB1Q16531 1140 aa17.64■□□□□ 0.41
GAPDH-206ENST00000466525 C1orf141Q5JVX7 400 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms