RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 CFAP45Q9UL16 551 aa13.43□□□□□ -0.26
CCDC115-204ENST00000465315 CYP21A2P08686 494 aa13.43□□□□□ -0.26
CCDC115-204ENST00000465315 ISM2Q6H9L7 571 aa13.43□□□□□ -0.26
CCDC115-204ENST00000465315 PYCARDQ9ULZ3 195 aa13.43□□□□□ -0.26
CCDC115-204ENST00000465315 PTPN12Q05209 780 aaKnown RBP13.43□□□□□ -0.26
CCDC115-204ENST00000465315 LRMPQ12912 555 aa13.43□□□□□ -0.26
CCDC115-204ENST00000465315 TOB2Q14106 344 aaPredicted RBP13.43□□□□□ -0.26
CCDC115-204ENST00000465315 TTLL5Q6EMB2 1281 aa13.43□□□□□ -0.26
CCDC115-204ENST00000465315 CCAR1Q8IX12 1150 aaKnown RBP13.43□□□□□ -0.26
CCDC115-204ENST00000465315 AKAP12Q02952 1782 aa13.43□□□□□ -0.26
CCDC115-204ENST00000465315 ERBB3P21860 1342 aa13.43□□□□□ -0.26
CCDC115-204ENST00000465315 ANKARQ7Z5J8 1434 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 BIN1O00499 593 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 NPHP1O15259 732 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 ST3GAL1Q11201 340 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 STK38Q15208 465 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 CADPS2Q86UW7 1296 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 PIBF1Q8WXW3 757 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 CBX8Q9HC52 389 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 CWC25Q9NXE8 425 aaPredicted RBP13.42□□□□□ -0.26
CCDC115-204ENST00000465315 CLIP2Q9UDT6 1046 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 PTPDC1A2A3K4 754 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 HMGN5P82970 282 aaKnown RBP13.42□□□□□ -0.26
CCDC115-204ENST00000465315 DDX19AQ9NUU7 478 aaKnown RBP13.42□□□□□ -0.26
CCDC115-204ENST00000465315 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
CCDC115-204ENST00000465315 DYNC1I1O14576 645 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 LRRC24Q50LG9 513 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 CCDC158Q5M9N0 1113 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 NRBP1Q9UHY1 535 aa13.42□□□□□ -0.26
CCDC115-204ENST00000465315 ATP5JP18859 108 aa13.41□□□□□ -0.26
CCDC115-204ENST00000465315 PDIA6Q15084 440 aa13.41□□□□□ -0.26
CCDC115-204ENST00000465315 FSIP1Q8NA03 581 aa13.41□□□□□ -0.26
CCDC115-204ENST00000465315 ZBTB9Q96C00 473 aa13.41□□□□□ -0.26
CCDC115-204ENST00000465315 PODXL2Q9NZ53 605 aa13.41□□□□□ -0.26
CCDC115-204ENST00000465315 PXDNQ92626 1479 aa13.41□□□□□ -0.26
CCDC115-204ENST00000465315 CCDC144CPQ8IYA2 1237 aa13.41□□□□□ -0.26
CCDC115-204ENST00000465315 TMEM87AQ8NBN3 555 aa13.41□□□□□ -0.26
CCDC115-204ENST00000465315 CBX1P83916 185 aa13.41□□□□□ -0.26
CCDC115-204ENST00000465315 SYNE3Q6ZMZ3 975 aa13.41□□□□□ -0.26
CCDC115-204ENST00000465315 TRMT1Q9NXH9 659 aaKnown RBP13.41□□□□□ -0.26
CCDC115-204ENST00000465315 RGPD8O14715 1765 aaPredicted RBP13.41□□□□□ -0.26
CCDC115-204ENST00000465315 GTF3C6Q969F1 213 aa13.4□□□□□ -0.26
CCDC115-204ENST00000465315 DCAF5Q96JK2 942 aa13.4□□□□□ -0.26
CCDC115-204ENST00000465315 PUS3Q9BZE2 481 aaKnown RBP13.4□□□□□ -0.26
CCDC115-204ENST00000465315 ADAMTSL3P82987 1691 aa13.4□□□□□ -0.26
CCDC115-204ENST00000465315 IDH1O75874 414 aaKnown RBP13.4□□□□□ -0.26
CCDC115-204ENST00000465315 ATP2B1P20020 1258 aa13.4□□□□□ -0.26
CCDC115-204ENST00000465315 SCRN1Q12765 414 aa13.4□□□□□ -0.26
CCDC115-204ENST00000465315 TRDNQ13061 729 aa13.4□□□□□ -0.26
CCDC115-204ENST00000465315 NFXL1Q6ZNB6 911 aa13.4□□□□□ -0.26
CCDC115-204ENST00000465315 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
CCDC115-204ENST00000465315 A0A1B0GUL7 405 aa13.4□□□□□ -0.27
CCDC115-204ENST00000465315 SMC2O95347 1197 aa13.4□□□□□ -0.27
CCDC115-204ENST00000465315 RXRAP19793 462 aa13.4□□□□□ -0.27
CCDC115-204ENST00000465315 FAM89AQ96GI7 184 aa13.4□□□□□ -0.27
CCDC115-204ENST00000465315 GPHNQ9NQX3 736 aaPredicted RBP13.4□□□□□ -0.27
CCDC115-204ENST00000465315 MRVI1Q9Y6F6 885 aa13.4□□□□□ -0.27
CCDC115-204ENST00000465315 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
CCDC115-204ENST00000465315 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
CCDC115-204ENST00000465315 CYP27B1O15528 508 aa13.39□□□□□ -0.27
CCDC115-204ENST00000465315 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
CCDC115-204ENST00000465315 KBTBD3Q8NAB2 608 aa13.39□□□□□ -0.27
CCDC115-204ENST00000465315 ZNF396Q96N95 335 aaPredicted RBP13.39□□□□□ -0.27
CCDC115-204ENST00000465315 MAP7D2Q96T17 732 aa13.39□□□□□ -0.27
CCDC115-204ENST00000465315 SLIT1O75093 1534 aa13.39□□□□□ -0.27
CCDC115-204ENST00000465315 AP5Z1O43299 807 aa13.39□□□□□ -0.27
CCDC115-204ENST00000465315 COPRSQ9NQ92 184 aa13.39□□□□□ -0.27
CCDC115-204ENST00000465315 CNNM1Q9NRU3 951 aa13.39□□□□□ -0.27
CCDC115-204ENST00000465315 TCHHQ07283 1943 aa13.39□□□□□ -0.27
CCDC115-204ENST00000465315 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
CCDC115-204ENST00000465315 USP42Q9H9J4 1324 aaKnown RBP13.38□□□□□ -0.27
CCDC115-204ENST00000465315 PXDNLA1KZ92 1463 aa13.38□□□□□ -0.27
CCDC115-204ENST00000465315 TPM3P06753 285 aa13.38□□□□□ -0.27
CCDC115-204ENST00000465315 RRP12Q5JTH9 1297 aaKnown RBP13.38□□□□□ -0.27
CCDC115-204ENST00000465315 CCDC82Q8N4S0 544 aa13.38□□□□□ -0.27
CCDC115-204ENST00000465315 A0A1B0GVL5 298 aa13.38□□□□□ -0.27
CCDC115-204ENST00000465315 METTL24Q5JXM2 366 aa13.38□□□□□ -0.27
CCDC115-204ENST00000465315 PLBD2Q8NHP8 589 aa13.38□□□□□ -0.27
CCDC115-204ENST00000465315 KLF18A0A0U1RQI7 1052 aa13.37□□□□□ -0.27
CCDC115-204ENST00000465315 C8orf76Q96K31 380 aa13.37□□□□□ -0.27
CCDC115-204ENST00000465315 TNNT1P13805 278 aa13.37□□□□□ -0.27
CCDC115-204ENST00000465315 IMMTQ16891 758 aaKnown RBP13.37□□□□□ -0.27
CCDC115-204ENST00000465315 CLSTN2Q9H4D0 955 aa13.37□□□□□ -0.27
CCDC115-204ENST00000465315 PIK3C2AO00443 1686 aa13.37□□□□□ -0.27
CCDC115-204ENST00000465315 PGBD1Q96JS3 809 aa13.37□□□□□ -0.27
CCDC115-204ENST00000465315 USP28Q96RU2 1077 aa13.37□□□□□ -0.27
CCDC115-204ENST00000465315 HMGB1P09429 215 aaKnown RBP13.36□□□□□ -0.27
CCDC115-204ENST00000465315 IL15P40933 162 aaPredicted RBP13.36□□□□□ -0.27
CCDC115-204ENST00000465315 PI16Q6UXB8 463 aa13.36□□□□□ -0.27
CCDC115-204ENST00000465315 ZCRB1Q8TBF4 217 aaKnown RBP13.36□□□□□ -0.27
CCDC115-204ENST00000465315 HAUS7Q99871 368 aa13.36□□□□□ -0.27
CCDC115-204ENST00000465315 ZSCAN16Q9H4T2 348 aaPredicted RBP13.36□□□□□ -0.27
CCDC115-204ENST00000465315 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
CCDC115-204ENST00000465315 E7EWF7 191 aa13.36□□□□□ -0.27
CCDC115-204ENST00000465315 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
CCDC115-204ENST00000465315 LRRFIP1Q32MZ4 808 aaKnown RBP13.36□□□□□ -0.27
CCDC115-204ENST00000465315 GJB4Q9NTQ9 266 aa13.36□□□□□ -0.27
CCDC115-204ENST00000465315 MARCKSP29966 332 aaPredicted RBP13.36□□□□□ -0.27
CCDC115-204ENST00000465315 PPP4R3BQ5MIZ7 849 aa13.36□□□□□ -0.27
CCDC115-204ENST00000465315 KIF6Q6ZMV9 814 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms