RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 EGFRP00533 1210 aa10.31□□□□□ -0.76
SMC3-202ENST00000462899 GPTP24298 496 aa10.31□□□□□ -0.76
SMC3-202ENST00000462899 RGMBQ6NW40 437 aa10.31□□□□□ -0.76
SMC3-202ENST00000462899 GIGYF2Q6Y7W6 1299 aaKnown RBP10.31□□□□□ -0.76
SMC3-202ENST00000462899 ZNF408Q9H9D4 720 aa10.31□□□□□ -0.76
SMC3-202ENST00000462899 RNF186Q9NXI6 227 aa10.31□□□□□ -0.76
SMC3-202ENST00000462899 TCERG1O14776 1098 aaKnown RBP10.3□□□□□ -0.76
SMC3-202ENST00000462899 RAD17O75943 681 aa10.3□□□□□ -0.76
SMC3-202ENST00000462899 SLC10A3P09131 477 aa10.3□□□□□ -0.76
SMC3-202ENST00000462899 GOLGA2Q08379 1002 aa10.3□□□□□ -0.76
SMC3-202ENST00000462899 TAF7Q15545 349 aaPredicted RBP10.3□□□□□ -0.76
SMC3-202ENST00000462899 SP8Q8IXZ3 490 aa10.3□□□□□ -0.76
SMC3-202ENST00000462899 SUPT20HQ8NEM7 779 aa10.3□□□□□ -0.76
SMC3-202ENST00000462899 ZBTB3Q9H5J0 574 aa10.3□□□□□ -0.76
SMC3-202ENST00000462899 CNOT7Q9UIV1 285 aaKnown RBP10.3□□□□□ -0.76
SMC3-202ENST00000462899 TAOK2Q9UL54 1235 aa10.3□□□□□ -0.76
SMC3-202ENST00000462899 ZNF609O15014 1411 aa10.3□□□□□ -0.76
SMC3-202ENST00000462899 EIF4A1P60842 406 aaKnown RBP10.29□□□□□ -0.76
SMC3-202ENST00000462899 KIF23Q02241 960 aaPredicted RBP10.29□□□□□ -0.76
SMC3-202ENST00000462899 PARP10Q53GL7 1025 aa10.29□□□□□ -0.76
SMC3-202ENST00000462899 KIF6Q6ZMV9 814 aa10.29□□□□□ -0.76
SMC3-202ENST00000462899 CTU1Q7Z7A3 348 aaKnown RBP10.29□□□□□ -0.76
SMC3-202ENST00000462899 USP48Q86UV5 1035 aa10.29□□□□□ -0.76
SMC3-202ENST00000462899 MICALL2Q8IY33 904 aa10.29□□□□□ -0.76
SMC3-202ENST00000462899 RTF1Q92541 710 aaKnown RBP10.29□□□□□ -0.76
SMC3-202ENST00000462899 DPF2Q92785 391 aa10.29□□□□□ -0.76
SMC3-202ENST00000462899 GBA2Q9HCG7 927 aaPredicted RBP10.29□□□□□ -0.76
SMC3-202ENST00000462899 MIS18AQ9NYP9 233 aa10.29□□□□□ -0.76
SMC3-202ENST00000462899 ERBB4Q15303 1308 aa10.29□□□□□ -0.76
SMC3-202ENST00000462899 RTL9Q8NET4 1388 aa10.28□□□□□ -0.76
SMC3-202ENST00000462899 TNIP1Q15025 636 aa10.28□□□□□ -0.76
SMC3-202ENST00000462899 DPP8Q6V1X1 898 aaPredicted RBP10.28□□□□□ -0.76
SMC3-202ENST00000462899 PPP1R42Q7Z4L9 355 aa10.28□□□□□ -0.76
SMC3-202ENST00000462899 NGEFQ8N5V2 710 aa10.28□□□□□ -0.76
SMC3-202ENST00000462899 EFCAB3Q8N7B9 438 aa10.28□□□□□ -0.76
SMC3-202ENST00000462899 NLRP3Q96P20 1036 aa10.28□□□□□ -0.76
SMC3-202ENST00000462899 CSRNP1Q96S65 589 aa10.28□□□□□ -0.76
SMC3-202ENST00000462899 RANBP2P49792 3224 aaKnown RBP10.27□□□□□ -0.77
SMC3-202ENST00000462899 ADM5C9JUS6 153 aa10.27□□□□□ -0.77
SMC3-202ENST00000462899 TRPA1O75762 1119 aa10.27□□□□□ -0.77
SMC3-202ENST00000462899 BBOX1O75936 387 aa10.27□□□□□ -0.77
SMC3-202ENST00000462899 TRIM26Q12899 539 aaPredicted RBP10.27□□□□□ -0.77
SMC3-202ENST00000462899 PDIA6Q15084 440 aa10.27□□□□□ -0.77
SMC3-202ENST00000462899 SAMD7Q7Z3H4 446 aa10.27□□□□□ -0.77
SMC3-202ENST00000462899 MPNDQ8N594 471 aa10.27□□□□□ -0.77
SMC3-202ENST00000462899 CCDC102AQ96A19 550 aa10.27□□□□□ -0.77
SMC3-202ENST00000462899 BCL2L13Q9BXK5 485 aa10.27□□□□□ -0.77
SMC3-202ENST00000462899 METRNQ9UJH8 293 aa10.27□□□□□ -0.77
SMC3-202ENST00000462899 HPS5Q9UPZ3 1129 aa10.27□□□□□ -0.77
SMC3-202ENST00000462899 H7C1D1 291 aa10.26□□□□□ -0.77
SMC3-202ENST00000462899 PSMD14O00487 310 aa10.26□□□□□ -0.77
SMC3-202ENST00000462899 MYL6BP14649 208 aa10.26□□□□□ -0.77
SMC3-202ENST00000462899 GRAPQ13588 217 aa10.26□□□□□ -0.77
SMC3-202ENST00000462899 KRT26Q7Z3Y9 468 aa10.26□□□□□ -0.77
SMC3-202ENST00000462899 RASAL3Q86YV0 1011 aa10.26□□□□□ -0.77
SMC3-202ENST00000462899 GRAPLQ8TC17 118 aaPredicted RBP10.26□□□□□ -0.77
SMC3-202ENST00000462899 UTP14AQ9BVJ6 771 aaKnown RBP10.26□□□□□ -0.77
SMC3-202ENST00000462899 RRP7AQ9Y3A4 280 aaKnown RBP10.26□□□□□ -0.77
SMC3-202ENST00000462899 KIAA0100Q14667 2235 aaKnown RBP10.26□□□□□ -0.77
SMC3-202ENST00000462899 RPS12P25398 132 aaKnown RBP10.25□□□□□ -0.77
SMC3-202ENST00000462899 ZNF157P51786 506 aaPredicted RBP10.25□□□□□ -0.77
SMC3-202ENST00000462899 MKRN3Q13064 507 aaKnown RBP10.25□□□□□ -0.77
SMC3-202ENST00000462899 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
SMC3-202ENST00000462899 PNISRQ8TF01 805 aaKnown RBP10.25□□□□□ -0.77
SMC3-202ENST00000462899 SLC39A7Q92504 469 aa10.25□□□□□ -0.77
SMC3-202ENST00000462899 CEP290O15078 2479 aa10.24□□□□□ -0.77
SMC3-202ENST00000462899 U2AF1L5P0DN76 240 aaPredicted RBP10.24□□□□□ -0.77
SMC3-202ENST00000462899 U2AF1Q01081 240 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMC3-202ENST00000462899 PROSER3Q2NL68 480 aa10.24□□□□□ -0.77
SMC3-202ENST00000462899 TBC1D10BQ4KMP7 808 aaPredicted RBP10.24□□□□□ -0.77
SMC3-202ENST00000462899 TMC4Q7Z404 712 aa10.24□□□□□ -0.77
SMC3-202ENST00000462899 NLRP10Q86W26 655 aa10.24□□□□□ -0.77
SMC3-202ENST00000462899 C2orf69Q8N8R5 385 aa10.24□□□□□ -0.77
SMC3-202ENST00000462899 CFAP53Q96M91 514 aa10.24□□□□□ -0.77
SMC3-202ENST00000462899 ASTN2O75129 1339 aaPredicted RBP10.24□□□□□ -0.77
SMC3-202ENST00000462899 HCLS1P14317 486 aaPredicted RBP10.23□□□□□ -0.77
SMC3-202ENST00000462899 PPP2R1AP30153 589 aa10.23□□□□□ -0.77
SMC3-202ENST00000462899 PKN2Q16513 984 aaKnown RBP10.23□□□□□ -0.77
SMC3-202ENST00000462899 NOM1Q5C9Z4 860 aaKnown RBP10.23□□□□□ -0.77
SMC3-202ENST00000462899 CDCA5Q96FF9 252 aa10.23□□□□□ -0.77
SMC3-202ENST00000462899 PLEKHF1Q96S99 279 aa10.23□□□□□ -0.77
SMC3-202ENST00000462899 THUMPD2Q9BTF0 503 aaKnown RBP10.23□□□□□ -0.77
SMC3-202ENST00000462899 TMX4Q9H1E5 349 aaPredicted RBP10.23□□□□□ -0.77
SMC3-202ENST00000462899 DBNDD1Q9H9R9 158 aa10.23□□□□□ -0.77
SMC3-202ENST00000462899 KCNQ5Q9NR82 932 aa10.23□□□□□ -0.77
SMC3-202ENST00000462899 GGA3Q9NZ52 723 aa10.23□□□□□ -0.77
SMC3-202ENST00000462899 POLLQ9UGP5 575 aa10.23□□□□□ -0.77
SMC3-202ENST00000462899 COLQQ9Y215 455 aaPredicted RBP10.23□□□□□ -0.77
SMC3-202ENST00000462899 NUDCQ9Y266 331 aa10.23□□□□□ -0.77
SMC3-202ENST00000462899 ECM29Q5VYK3 1845 aa10.22□□□□□ -0.77
SMC3-202ENST00000462899 KIF4BQ2VIQ3 1234 aa10.22□□□□□ -0.77
SMC3-202ENST00000462899 DDX46Q7L014 1031 aaKnown RBP10.22□□□□□ -0.77
SMC3-202ENST00000462899 ZNF296Q8WUU4 475 aaPredicted RBP10.22□□□□□ -0.77
SMC3-202ENST00000462899 DCPSQ96C86 337 aaKnown RBP10.22□□□□□ -0.77
SMC3-202ENST00000462899 COL6A3P12111 3177 aa10.22□□□□□ -0.77
SMC3-202ENST00000462899 POTEFA5A3E0 1075 aa10.21□□□□□ -0.77
SMC3-202ENST00000462899 ECE2O60344 883 aa10.21□□□□□ -0.77
SMC3-202ENST00000462899 ANXA1P04083 346 aa10.21□□□□□ -0.77
SMC3-202ENST00000462899 VIL1P09327 827 aaKnown RBP10.21□□□□□ -0.77
SMC3-202ENST00000462899 C7P10643 843 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms