RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 BNIP3LO60238 219 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 ARAFP10398 606 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 EIF4BP23588 611 aaKnown RBP5.01□□□□□ -1.61
VCL-203ENST00000461383 COL8A1P27658 744 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 TRIP4Q15650 581 aaPredicted RBP5.01□□□□□ -1.61
VCL-203ENST00000461383 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.01□□□□□ -1.61
VCL-203ENST00000461383 FAM182BQ5T319 152 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 XKR5Q6UX68 686 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 GALNT6Q8NCL4 622 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 EDARADDQ8WWZ3 215 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 CCDC74AQ96AQ1 378 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 PNMA5Q96PV4 448 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 AVENQ9NQS1 362 aaPredicted RBP5.01□□□□□ -1.61
VCL-203ENST00000461383 RNF19AQ9NV58 838 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 TMEM63CQ9P1W3 806 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 KCNMB2Q9Y691 235 aa5.01□□□□□ -1.61
VCL-203ENST00000461383 KRBA1A5PL33 1030 aa5□□□□□ -1.61
VCL-203ENST00000461383 PIK3R2O00459 728 aa5□□□□□ -1.61
VCL-203ENST00000461383 KHNYNO15037 678 aaKnown RBP5□□□□□ -1.61
VCL-203ENST00000461383 ATXN7O15265 892 aaPredicted RBP5□□□□□ -1.61
VCL-203ENST00000461383 GADD45BO75293 160 aaPredicted RBP5□□□□□ -1.61
VCL-203ENST00000461383 EPXP11678 715 aa5□□□□□ -1.61
VCL-203ENST00000461383 LINC00114Q6XXX2 140 aa5□□□□□ -1.61
VCL-203ENST00000461383 NLRP13Q86W25 1043 aa5□□□□□ -1.61
VCL-203ENST00000461383 RNF34Q969K3 372 aa5□□□□□ -1.61
VCL-203ENST00000461383 ABHD17AQ96GS6 310 aa5□□□□□ -1.61
VCL-203ENST00000461383 ZFYVE28Q9HCC9 887 aa5□□□□□ -1.61
VCL-203ENST00000461383 ABI2Q9NYB9 513 aaPredicted RBP5□□□□□ -1.61
VCL-203ENST00000461383 KCNH4Q9UQ05 1017 aa5□□□□□ -1.61
VCL-203ENST00000461383 AK5Q9Y6K8 562 aa5□□□□□ -1.61
VCL-203ENST00000461383 DCDC2BA2VCK2 349 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 GIPC1O14908 333 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 POLR3DP05423 398 aaPredicted RBP4.99□□□□□ -1.61
VCL-203ENST00000461383 BMP4P12644 408 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 CES1P23141 567 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 ZNF76P36508 570 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 DGKGP49619 791 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 ZC3H6P61129 1189 aaKnown RBP4.99□□□□□ -1.61
VCL-203ENST00000461383 SAMD5Q5TGI4 173 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 C9orf131Q5VYM1 1079 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 USPL1Q5W0Q7 1092 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 KRT25Q7Z3Z0 450 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 PMEPA1Q969W9 287 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 NPHS2Q9NP85 383 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 PPP4R2Q9NY27 417 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 GGA1Q9UJY5 639 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 PCDHGC4Q9Y5F7 938 aa4.99□□□□□ -1.61
VCL-203ENST00000461383 GNB5O14775 395 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 IGSF3O75054 1194 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 SASH3O75995 380 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 FAM157BP0CG42 384 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 RARAP10276 462 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 HDLBPQ00341 1268 aaKnown RBP4.98□□□□□ -1.61
VCL-203ENST00000461383 CTBSQ01459 385 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 CCINQ13939 588 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 PI16Q6UXB8 463 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 C1orf127Q8N9H9 656 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 EPS8L3Q8TE67 593 aaKnown RBP4.98□□□□□ -1.61
VCL-203ENST00000461383 CRELD1Q96HD1 420 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 ZCCHC2Q9C0B9 1178 aaKnown RBP4.98□□□□□ -1.61
VCL-203ENST00000461383 C12orf49Q9H741 205 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 C11orf16Q9NQ32 467 aa4.98□□□□□ -1.61
VCL-203ENST00000461383 METTL5Q9NRN9 209 aaKnown RBP4.98□□□□□ -1.61
VCL-203ENST00000461383 EREGO14944 169 aa4.97□□□□□ -1.61
VCL-203ENST00000461383 BAG6P46379 1132 aa4.97□□□□□ -1.61
VCL-203ENST00000461383 SFSWAPQ12872 951 aaKnown RBP4.97□□□□□ -1.61
VCL-203ENST00000461383 NT5DC4Q86YG4 428 aa4.97□□□□□ -1.61
VCL-203ENST00000461383 C8orf37Q96NL8 207 aa4.97□□□□□ -1.61
VCL-203ENST00000461383 CCSER2Q9H7U1 834 aa4.97□□□□□ -1.61
VCL-203ENST00000461383 FAM8A1Q9UBU6 413 aa4.97□□□□□ -1.61
VCL-203ENST00000461383 HCN2Q9UL51 889 aa4.97□□□□□ -1.61
VCL-203ENST00000461383 K7ELQ4 463 aaPredicted RBP4.96□□□□□ -1.62
VCL-203ENST00000461383 EGFRP00533 1210 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 PSAPP07602 524 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 EDN3P14138 238 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 TARSP26639 723 aaKnown RBP4.96□□□□□ -1.62
VCL-203ENST00000461383 GRNP28799 593 aaKnown RBP4.96□□□□□ -1.62
VCL-203ENST00000461383 KCNQ4P56696 695 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 FANCCQ00597 558 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 TNP2Q05952 138 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 NEUROD1Q13562 356 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 LAMC2Q13753 1193 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 NAALADL2Q58DX5 795 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 NCAPG2Q86XI2 1143 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 GALNT12Q8IXK2 581 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 BTBD6Q96KE9 485 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 MDFIQ99750 246 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 BCO2Q9BYV7 579 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 SRCIN1Q9C0H9 1055 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 EHD4Q9H223 541 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 NOP53Q9NZM5 478 aaKnown RBP4.96□□□□□ -1.62
VCL-203ENST00000461383 MARK1Q9P0L2 795 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 CNTN3Q9P232 1028 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 KANSL3Q9P2N6 904 aa4.96□□□□□ -1.62
VCL-203ENST00000461383 EFSO43281 561 aa4.95□□□□□ -1.62
VCL-203ENST00000461383 MMP20O60882 483 aa4.95□□□□□ -1.62
VCL-203ENST00000461383 USP17L7P0C7H9 530 aa4.95□□□□□ -1.62
VCL-203ENST00000461383 MAPTP10636 758 aaKnown RBP4.95□□□□□ -1.62
VCL-203ENST00000461383 NFKB1P19838 968 aa4.95□□□□□ -1.62
VCL-203ENST00000461383 ADH6P28332 368 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms