RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 HAUS7Q99871 368 aa14.24□□□□□ -0.13
GCOM1-203ENST00000460962 CLIP2Q9UDT6 1046 aa14.24□□□□□ -0.13
GCOM1-203ENST00000460962 GOLGA6L19H0YKK7 550 aa14.24□□□□□ -0.13
GCOM1-203ENST00000460962 PIP4K2AP48426 406 aaPredicted RBP14.24□□□□□ -0.13
GCOM1-203ENST00000460962 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
GCOM1-203ENST00000460962 ZSCAN25Q6NSZ9 544 aa14.24□□□□□ -0.13
GCOM1-203ENST00000460962 ERBB3P21860 1342 aa14.24□□□□□ -0.13
GCOM1-203ENST00000460962 PDCL2Q8N4E4 241 aa14.23□□□□□ -0.13
GCOM1-203ENST00000460962 C16orf45Q96MC5 204 aaPredicted RBP14.23□□□□□ -0.13
GCOM1-203ENST00000460962 LLPHQ9BRT6 129 aaKnown RBP14.23□□□□□ -0.13
GCOM1-203ENST00000460962 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
GCOM1-203ENST00000460962 C5P01031 1676 aa14.23□□□□□ -0.13
GCOM1-203ENST00000460962 LMTK3Q96Q04 1460 aa14.23□□□□□ -0.13
GCOM1-203ENST00000460962 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
GCOM1-203ENST00000460962 FOSBP53539 338 aa14.23□□□□□ -0.13
GCOM1-203ENST00000460962 TTC5Q8N0Z6 440 aa14.23□□□□□ -0.13
GCOM1-203ENST00000460962 NLRP2Q9NX02 1062 aa14.23□□□□□ -0.13
GCOM1-203ENST00000460962 CAMTA1Q9Y6Y1 1673 aa14.23□□□□□ -0.13
GCOM1-203ENST00000460962 A0A087WZG4 1122 aa14.22□□□□□ -0.13
GCOM1-203ENST00000460962 RABL6Q3YEC7 729 aaPredicted RBP14.22□□□□□ -0.13
GCOM1-203ENST00000460962 SMARCC2Q8TAQ2 1214 aa14.22□□□□□ -0.13
GCOM1-203ENST00000460962 PRDM10Q9NQV6 1147 aa14.22□□□□□ -0.13
GCOM1-203ENST00000460962 USP16Q9Y5T5 823 aa14.22□□□□□ -0.13
GCOM1-203ENST00000460962 ADAMTS7Q9UKP4 1686 aa14.22□□□□□ -0.13
GCOM1-203ENST00000460962 KDM6AO15550 1401 aaPredicted RBP14.22□□□□□ -0.13
GCOM1-203ENST00000460962 ATP5J2-PTCD1G3V325 749 aa14.22□□□□□ -0.13
GCOM1-203ENST00000460962 PFKFB2O60825 505 aa14.22□□□□□ -0.13
GCOM1-203ENST00000460962 PTCD1O75127 700 aaKnown RBP14.22□□□□□ -0.13
GCOM1-203ENST00000460962 SNRPA1P09661 255 aaKnown RBP14.22□□□□□ -0.13
GCOM1-203ENST00000460962 ZC3H6P61129 1189 aaKnown RBP14.22□□□□□ -0.13
GCOM1-203ENST00000460962 KBTBD3Q8NAB2 608 aa14.22□□□□□ -0.13
GCOM1-203ENST00000460962 TATP17735 454 aaPredicted RBP14.22□□□□□ -0.13
GCOM1-203ENST00000460962 NAA16Q6N069 864 aaPredicted RBP14.22□□□□□ -0.13
GCOM1-203ENST00000460962 DHX32Q7L7V1 743 aaKnown RBP14.22□□□□□ -0.13
GCOM1-203ENST00000460962 CTAGE5O15320 804 aa14.21□□□□□ -0.13
GCOM1-203ENST00000460962 CTIFO43310 598 aaKnown RBP14.21□□□□□ -0.13
GCOM1-203ENST00000460962 PHKG2P15735 406 aa14.21□□□□□ -0.13
GCOM1-203ENST00000460962 CCDC73Q6ZRK6 1079 aa14.21□□□□□ -0.13
GCOM1-203ENST00000460962 STOX1Q6ZVD7 989 aa14.21□□□□□ -0.13
GCOM1-203ENST00000460962 CCAR1Q8IX12 1150 aaKnown RBP14.21□□□□□ -0.13
GCOM1-203ENST00000460962 NSUN7Q8NE18 718 aaKnown RBP14.21□□□□□ -0.13
GCOM1-203ENST00000460962 SH3TC1Q8TE82 1336 aa14.21□□□□□ -0.13
GCOM1-203ENST00000460962 PTPDC1A2A3K4 754 aa14.21□□□□□ -0.14
GCOM1-203ENST00000460962 STX1AQ16623 288 aa14.21□□□□□ -0.14
GCOM1-203ENST00000460962 NAP1L2Q9ULW6 460 aaPredicted RBP14.21□□□□□ -0.14
GCOM1-203ENST00000460962 CDC25BP30305 580 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 APOBRQ0VD83 1088 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 KRT28Q7Z3Y7 464 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 CACTINQ8WUQ7 758 aaKnown RBP14.2□□□□□ -0.14
GCOM1-203ENST00000460962 TNNT1P13805 278 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 CBX1P83916 185 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 LRP10Q7Z4F1 713 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 NEUROD6Q96NK8 337 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 FTOQ9C0B1 505 aaKnown RBP eCLIP14.2□□□□□ -0.14
GCOM1-203ENST00000460962 RCOR1Q9UKL0 485 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 GOLIM4O00461 696 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 KINO60870 393 aaKnown RBP14.2□□□□□ -0.14
GCOM1-203ENST00000460962 IQCB1Q15051 598 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 LMBR1LQ6UX01 489 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 C11orf57Q6ZUT1 292 aaPredicted RBP14.2□□□□□ -0.14
GCOM1-203ENST00000460962 ANKRD7Q92527 254 aa14.2□□□□□ -0.14
GCOM1-203ENST00000460962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
GCOM1-203ENST00000460962 SMTNL1A8MU46 457 aa14.19□□□□□ -0.14
GCOM1-203ENST00000460962 BECN2A8MW95 431 aa14.19□□□□□ -0.14
GCOM1-203ENST00000460962 ADD1P35611 737 aaKnown RBP14.19□□□□□ -0.14
GCOM1-203ENST00000460962 CCT2P78371 535 aaKnown RBP14.19□□□□□ -0.14
GCOM1-203ENST00000460962 TPD52L1Q16890 204 aaPredicted RBP14.19□□□□□ -0.14
GCOM1-203ENST00000460962 CCDC144BQ3MJ40 725 aa14.19□□□□□ -0.14
GCOM1-203ENST00000460962 CCDC144CPQ8IYA2 1237 aa14.19□□□□□ -0.14
GCOM1-203ENST00000460962 IFNL2Q8IZJ0 200 aa14.19□□□□□ -0.14
GCOM1-203ENST00000460962 ZNF396Q96N95 335 aaPredicted RBP14.19□□□□□ -0.14
GCOM1-203ENST00000460962 FMNL2Q96PY5 1086 aa14.19□□□□□ -0.14
GCOM1-203ENST00000460962 SCN11AQ9UI33 1791 aa14.19□□□□□ -0.14
GCOM1-203ENST00000460962 SARM1Q6SZW1 724 aa14.19□□□□□ -0.14
GCOM1-203ENST00000460962 PAG1Q9NWQ8 432 aa14.19□□□□□ -0.14
GCOM1-203ENST00000460962 PRDM4Q9UKN5 801 aa14.19□□□□□ -0.14
GCOM1-203ENST00000460962 RGPD5Q99666 1765 aa14.19□□□□□ -0.14
GCOM1-203ENST00000460962 AFDNP55196 1824 aaKnown RBP14.18□□□□□ -0.14
GCOM1-203ENST00000460962 CTDNEP1O95476 244 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 USP28Q96RU2 1077 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 DSCC1Q9BVC3 393 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 HELLSQ9NRZ9 838 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 PALLDQ8WX93 1383 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 ATP2B3Q16720 1220 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 GOLPH3LQ9H4A5 285 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 ME1P48163 572 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 SLFNL1Q499Z3 407 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 ATL3Q6DD88 541 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 MRFAP1L1Q96HT8 127 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 NCOA5Q9HCD5 579 aaKnown RBP14.18□□□□□ -0.14
GCOM1-203ENST00000460962 PAXBP1Q9Y5B6 917 aa14.18□□□□□ -0.14
GCOM1-203ENST00000460962 PPFIA3O75145 1194 aa14.17□□□□□ -0.14
GCOM1-203ENST00000460962 EXOSC10Q01780 885 aaKnown RBP14.17□□□□□ -0.14
GCOM1-203ENST00000460962 GUCY1B3Q02153 619 aa14.17□□□□□ -0.14
GCOM1-203ENST00000460962 FAM160A1Q05DH4 1040 aa14.17□□□□□ -0.14
GCOM1-203ENST00000460962 LRRC8AQ8IWT6 810 aa14.17□□□□□ -0.14
GCOM1-203ENST00000460962 CCDC112Q8NEF3 446 aa14.17□□□□□ -0.14
GCOM1-203ENST00000460962 PLBD2Q8NHP8 589 aa14.17□□□□□ -0.14
GCOM1-203ENST00000460962 ANO10Q9NW15 660 aa14.17□□□□□ -0.14
GCOM1-203ENST00000460962 E7EWF7 191 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms