RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 RUBCNLQ9H714 662 aa7.94□□□□□ -1.14
PTPN12-209ENST00000460731 STK26Q9P289 416 aa7.94□□□□□ -1.14
PTPN12-209ENST00000460731 TMEM94Q12767 1356 aa7.94□□□□□ -1.14
PTPN12-209ENST00000460731 PLEKHH1Q9ULM0 1364 aa7.94□□□□□ -1.14
PTPN12-209ENST00000460731 ARHGEF28Q8N1W1 1705 aaKnown RBP7.93□□□□□ -1.14
PTPN12-209ENST00000460731 ST20-MTHFSA0A0A6YYL1 179 aa7.93□□□□□ -1.14
PTPN12-209ENST00000460731 ARAFP10398 606 aa7.93□□□□□ -1.14
PTPN12-209ENST00000460731 EIF4G2P78344 907 aaKnown RBP eCLIP7.93□□□□□ -1.14
PTPN12-209ENST00000460731 ZNF592Q92610 1267 aa7.93□□□□□ -1.14
PTPN12-209ENST00000460731 CENPJQ9HC77 1338 aaPredicted RBP7.93□□□□□ -1.14
PTPN12-209ENST00000460731 EIF3AQ14152 1382 aaKnown RBP7.93□□□□□ -1.14
PTPN12-209ENST00000460731 USP47Q96K76 1375 aa7.93□□□□□ -1.14
PTPN12-209ENST00000460731 DCCP43146 1447 aa7.93□□□□□ -1.14
PTPN12-209ENST00000460731 ADGRL3Q9HAR2 1447 aa7.93□□□□□ -1.14
PTPN12-209ENST00000460731 XIRP1Q702N8 1843 aaKnown RBP7.92□□□□□ -1.14
PTPN12-209ENST00000460731 CSB-PGBD3P0DP91 1061 aa7.92□□□□□ -1.14
PTPN12-209ENST00000460731 RNF135Q8IUD6 432 aa7.92□□□□□ -1.14
PTPN12-209ENST00000460731 PGBD3Q8N328 593 aa7.92□□□□□ -1.14
PTPN12-209ENST00000460731 DNAAF2Q9NVR5 837 aaKnown RBP7.92□□□□□ -1.14
PTPN12-209ENST00000460731 ADGRB2O60241 1585 aa7.92□□□□□ -1.14
PTPN12-209ENST00000460731 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.92□□□□□ -1.14
PTPN12-209ENST00000460731 HSPA5P11021 654 aaKnown RBP7.91□□□□□ -1.14
PTPN12-209ENST00000460731 AMPD1P23109 780 aa7.91□□□□□ -1.14
PTPN12-209ENST00000460731 EFHC2Q5JST6 749 aa7.91□□□□□ -1.14
PTPN12-209ENST00000460731 GNASQ5JWF2 1037 aa7.91□□□□□ -1.14
PTPN12-209ENST00000460731 NOP53Q9NZM5 478 aaKnown RBP7.91□□□□□ -1.14
PTPN12-209ENST00000460731 HCN2Q9UL51 889 aa7.91□□□□□ -1.14
PTPN12-209ENST00000460731 CCDC85AQ96PX6 553 aaPredicted RBP7.9□□□□□ -1.14
PTPN12-209ENST00000460731 CDCA7Q9BWT1 371 aaPredicted RBP7.9□□□□□ -1.14
PTPN12-209ENST00000460731 POGKQ9P215 609 aa7.9□□□□□ -1.14
PTPN12-209ENST00000460731 KLF15Q9UIH9 416 aa7.9□□□□□ -1.14
PTPN12-209ENST00000460731 TMEM214Q6NUQ4 689 aaKnown RBP7.89□□□□□ -1.15
PTPN12-209ENST00000460731 SEMA6BQ9H3T3 888 aa7.89□□□□□ -1.15
PTPN12-209ENST00000460731 CDC42BPGQ6DT37 1551 aa7.88□□□□□ -1.15
PTPN12-209ENST00000460731 ANKARQ7Z5J8 1434 aa7.88□□□□□ -1.15
PTPN12-209ENST00000460731 EVC2Q86UK5 1308 aa7.88□□□□□ -1.15
PTPN12-209ENST00000460731 NEURL1BA8MQ27 555 aa7.88□□□□□ -1.15
PTPN12-209ENST00000460731 SOCS7O14512 581 aa7.88□□□□□ -1.15
PTPN12-209ENST00000460731 RHBDD1Q8TEB9 315 aa7.88□□□□□ -1.15
PTPN12-209ENST00000460731 CDK19Q9BWU1 502 aa7.88□□□□□ -1.15
PTPN12-209ENST00000460731 MSH6P52701 1360 aa7.87□□□□□ -1.15
PTPN12-209ENST00000460731 NALCNQ8IZF0 1738 aa7.87□□□□□ -1.15
PTPN12-209ENST00000460731 PRR36Q9H6K5 1346 aa7.87□□□□□ -1.15
PTPN12-209ENST00000460731 DOC2BQ14184 412 aa7.87□□□□□ -1.15
PTPN12-209ENST00000460731 CHSY3Q70JA7 882 aa7.87□□□□□ -1.15
PTPN12-209ENST00000460731 KRTAP1-3Q8IUG1 177 aa7.87□□□□□ -1.15
PTPN12-209ENST00000460731 ZCCHC2Q9C0B9 1178 aaKnown RBP7.87□□□□□ -1.15
PTPN12-209ENST00000460731 SLAIN2Q9P270 581 aa7.87□□□□□ -1.15
PTPN12-209ENST00000460731 CEP126Q9P2H0 1117 aa7.87□□□□□ -1.15
PTPN12-209ENST00000460731 ZNF330Q9Y3S2 320 aaPredicted RBP7.87□□□□□ -1.15
PTPN12-209ENST00000460731 PCDHGC4Q9Y5F7 938 aa7.87□□□□□ -1.15
PTPN12-209ENST00000460731 TULP4Q9NRJ4 1543 aa7.87□□□□□ -1.15
PTPN12-209ENST00000460731 MST1RQ04912 1400 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 QRICH2Q9H0J4 1663 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 MYCP01106 439 aaPredicted RBP7.86□□□□□ -1.15
PTPN12-209ENST00000460731 ATF3P18847 181 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 ATP4AP20648 1035 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 TMF1P82094 1093 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 SAFB2Q14151 953 aaKnown RBP eCLIP7.86□□□□□ -1.15
PTPN12-209ENST00000460731 CDCA8Q53HL2 280 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 ESCO1Q5FWF5 840 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 FAM182BQ5T319 152 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 FIGNL1Q6PIW4 674 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 NLRP8Q86W28 1048 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 ETNK1Q9HBU6 452 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 AVENQ9NQS1 362 aaPredicted RBP7.86□□□□□ -1.15
PTPN12-209ENST00000460731 C1orf167Q5SNV9 1468 aa7.86□□□□□ -1.15
PTPN12-209ENST00000460731 DISP3Q9P2K9 1392 aa7.85□□□□□ -1.15
PTPN12-209ENST00000460731 TOM1O60784 492 aa7.85□□□□□ -1.15
PTPN12-209ENST00000460731 GTF2E1P29083 439 aaPredicted RBP7.85□□□□□ -1.15
PTPN12-209ENST00000460731 ZMYM1Q5SVZ6 1142 aa7.85□□□□□ -1.15
PTPN12-209ENST00000460731 FCHSD1Q86WN1 690 aa7.85□□□□□ -1.15
PTPN12-209ENST00000460731 NUDT16Q96DE0 195 aaKnown RBP7.85□□□□□ -1.15
PTPN12-209ENST00000460731 TRIM11Q96F44 468 aa7.85□□□□□ -1.15
PTPN12-209ENST00000460731 PCMTD1Q96MG8 357 aaPredicted RBP7.85□□□□□ -1.15
PTPN12-209ENST00000460731 HIRIP3Q9BW71 556 aaPredicted RBP7.85□□□□□ -1.15
PTPN12-209ENST00000460731 FMN2Q9NZ56 1722 aa7.85□□□□□ -1.15
PTPN12-209ENST00000460731 ATP7BP35670 1465 aa7.85□□□□□ -1.15
PTPN12-209ENST00000460731 ATAD2Q6PL18 1390 aa7.84□□□□□ -1.15
PTPN12-209ENST00000460731 NINLQ9Y2I6 1382 aa7.84□□□□□ -1.15
PTPN12-209ENST00000460731 ADH6P28332 368 aa7.84□□□□□ -1.15
PTPN12-209ENST00000460731 FOXD4L6Q3SYB3 417 aaPredicted RBP7.84□□□□□ -1.15
PTPN12-209ENST00000460731 FOXD4L3Q6VB84 417 aaPredicted RBP7.84□□□□□ -1.15
PTPN12-209ENST00000460731 C1orf216Q8TAB5 229 aa7.84□□□□□ -1.15
PTPN12-209ENST00000460731 USP32Q8NFA0 1604 aa7.84□□□□□ -1.15
PTPN12-209ENST00000460731 POLR3AO14802 1390 aaPredicted RBP7.84□□□□□ -1.16
PTPN12-209ENST00000460731 KIF7Q2M1P5 1343 aa7.83□□□□□ -1.16
PTPN12-209ENST00000460731 STAU1O95793 577 aaKnown RBP7.83□□□□□ -1.16
PTPN12-209ENST00000460731 TNP2Q05952 138 aa7.83□□□□□ -1.16
PTPN12-209ENST00000460731 RSPO4Q2I0M5 234 aaPredicted RBP7.83□□□□□ -1.16
PTPN12-209ENST00000460731 BRINP3Q76B58 766 aa7.83□□□□□ -1.16
PTPN12-209ENST00000460731 C14orf37Q86TY3 774 aa7.83□□□□□ -1.16
PTPN12-209ENST00000460731 PHTF2Q8N3S3 785 aa7.83□□□□□ -1.16
PTPN12-209ENST00000460731 KRTAP4-12Q9BQ66 201 aa7.83□□□□□ -1.16
PTPN12-209ENST00000460731 CPSF1Q10570 1443 aaKnown RBP7.83□□□□□ -1.16
PTPN12-209ENST00000460731 BRD4O60885 1362 aaPredicted RBP7.83□□□□□ -1.16
PTPN12-209ENST00000460731 CCDC7Q96M83 1385 aa7.83□□□□□ -1.16
PTPN12-209ENST00000460731 WASHC2AQ641Q2 1341 aa7.82□□□□□ -1.16
PTPN12-209ENST00000460731 GATA4P43694 442 aa7.82□□□□□ -1.16
PTPN12-209ENST00000460731 TSGA10IPQ3SY00 556 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms