RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 PRIMPOLQ96LW4 560 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 ZNF396Q96N95 335 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-202ENST00000459727 FUCA2Q9BTY2 467 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 PAG1Q9NWQ8 432 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 COL5A2P05997 1499 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-202ENST00000459727 WDR19Q8NEZ3 1342 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 UBAP1LF5GYI3 381 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 DYNC1I1O14576 645 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 PFKFB2O60825 505 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 IL2RBP14784 551 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 HSPA1LP34931 641 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 FOXO4P98177 505 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 ST3GAL1Q11201 340 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 DHX8Q14562 1220 aaKnown RBP10.43□□□□□ -0.74
HDAC3-202ENST00000459727 HSP90AB3PQ58FF7 597 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 CCDC158Q5M9N0 1113 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 ZMYM1Q5SVZ6 1142 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 ZSCAN25Q6NSZ9 544 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 SASS6Q6UVJ0 657 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-202ENST00000459727 ZNF589Q86UQ0 364 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-202ENST00000459727 PIBF1Q8WXW3 757 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 DNAJC2Q99543 621 aaKnown RBP10.43□□□□□ -0.74
HDAC3-202ENST00000459727 PLA2G12BQ9BX93 195 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 AGXT2Q9BYV1 514 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 TNMDQ9H2S6 317 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 PRDM11Q9NQV5 511 aa10.43□□□□□ -0.74
HDAC3-202ENST00000459727 RNF113AO15541 343 aaKnown RBP10.42□□□□□ -0.74
HDAC3-202ENST00000459727 ADCY5O95622 1261 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 HCLS1P14317 486 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-202ENST00000459727 CPA1P15085 419 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 HSP90AA2PQ14568 343 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-202ENST00000459727 CCDC57Q2TAC2 916 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 FOXD4L6Q3SYB3 417 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-202ENST00000459727 FOXD4L3Q6VB84 417 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-202ENST00000459727 KIF6Q6ZMV9 814 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 RBM43Q6ZSC3 357 aaKnown RBP10.42□□□□□ -0.74
HDAC3-202ENST00000459727 TOM1L2Q6ZVM7 507 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 CDC37L1Q7L3B6 337 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 NECAB1Q8N987 351 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 SMARCC2Q8TAQ2 1214 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 LEO1Q8WVC0 666 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-202ENST00000459727 ZNF274Q96GC6 653 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-202ENST00000459727 DBNDD2Q9BQY9 259 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 CLSTN2Q9H4D0 955 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 CEP126Q9P2H0 1117 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 CHMP3Q9Y3E7 222 aa10.42□□□□□ -0.74
HDAC3-202ENST00000459727 SOS2Q07890 1332 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-202ENST00000459727 IFIT1P09914 478 aaKnown RBP10.41□□□□□ -0.74
HDAC3-202ENST00000459727 CHAF1AQ13111 956 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-202ENST00000459727 RESTQ13127 1097 aa10.41□□□□□ -0.74
HDAC3-202ENST00000459727 Q6ZUG5 572 aa10.41□□□□□ -0.74
HDAC3-202ENST00000459727 TTC6Q86TZ1 520 aa10.41□□□□□ -0.74
HDAC3-202ENST00000459727 CHAMP1Q96JM3 812 aa10.41□□□□□ -0.74
HDAC3-202ENST00000459727 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.41□□□□□ -0.742e-6■■■■□ 21.7
HDAC3-202ENST00000459727 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.41□□□□□ -0.74
HDAC3-202ENST00000459727 TJP1Q07157 1748 aa10.41□□□□□ -0.74
HDAC3-202ENST00000459727 CDHR2Q9BYE9 1310 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 ATP5J2-PTCD1G3V325 749 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 PTCD1O75127 700 aaKnown RBP10.4□□□□□ -0.74
HDAC3-202ENST00000459727 STARD3NLO95772 234 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 PCCAP05165 728 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-202ENST00000459727 CYP21A2P08686 494 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 TYRO3Q06418 890 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 TTF1Q15361 905 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-202ENST00000459727 IMMTQ16891 758 aaKnown RBP10.4□□□□□ -0.74
HDAC3-202ENST00000459727 CCDC73Q6ZRK6 1079 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 ATG9AQ7Z3C6 839 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 KLHDC4Q8TBB5 520 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 BICD2Q8TD16 824 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 ZNF512BQ96KM6 892 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-202ENST00000459727 NEUROD6Q96NK8 337 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 ISCA1Q9BUE6 129 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 PDCL3Q9H2J4 239 aa10.4□□□□□ -0.74
HDAC3-202ENST00000459727 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.4□□□□□ -0.74
HDAC3-202ENST00000459727 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 GOLIM4O00461 696 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 NEMFO60524 1076 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 EVCP57679 992 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 TCIRG1Q13488 830 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 CHRNA2Q15822 529 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 TAF7LQ5H9L4 462 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 TTC39AQ5SRH9 613 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 GORABQ5T7V8 394 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 NBPF14Q5TI25 921 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 NBPF10Q6P3W6 841 aaKnown RBP10.39□□□□□ -0.75
HDAC3-202ENST00000459727 GIMAP6Q6P9H5 292 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 DDX46Q7L014 1031 aaKnown RBP10.39□□□□□ -0.75
HDAC3-202ENST00000459727 NBPF15Q8N660 670 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 BRF1Q92994 677 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 AK7Q96M32 723 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 LARP6Q9BRS8 491 aaKnown RBP10.39□□□□□ -0.75
HDAC3-202ENST00000459727 SPTLC3Q9NUV7 552 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 TMOD3Q9NYL9 352 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 RGS17Q9UGC6 210 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-202ENST00000459727 LRP6O75581 1613 aa10.39□□□□□ -0.75
HDAC3-202ENST00000459727 A0A1B0GUL7 405 aa10.38□□□□□ -0.75
HDAC3-202ENST00000459727 CDC25BP30305 580 aa10.38□□□□□ -0.75
HDAC3-202ENST00000459727 EXOSC10Q01780 885 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms