RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 ZNF438Q7Z4V0 828 aa8.44□□□□□ -1.06
DDX1-204ENST00000459706 CMTR1Q8N1G2 835 aaKnown RBP8.44□□□□□ -1.06
DDX1-204ENST00000459706 ZFP42Q96MM3 310 aa8.44□□□□□ -1.06
DDX1-204ENST00000459706 CEP63Q96MT8 703 aa8.44□□□□□ -1.06
DDX1-204ENST00000459706 RRBP1Q9P2E9 1410 aaKnown RBP8.44□□□□□ -1.06
DDX1-204ENST00000459706 FIGNL2A6NMB9 653 aa8.43□□□□□ -1.06
DDX1-204ENST00000459706 H7C1W4 665 aa8.43□□□□□ -1.06
DDX1-204ENST00000459706 RHOQP17081 205 aa8.43□□□□□ -1.06
DDX1-204ENST00000459706 SRCIN1Q9C0H9 1055 aa8.43□□□□□ -1.06
DDX1-204ENST00000459706 ELP3Q9H9T3 547 aa8.43□□□□□ -1.06
DDX1-204ENST00000459706 ZFYVE28Q9HCC9 887 aa8.43□□□□□ -1.06
DDX1-204ENST00000459706 WWC3Q9ULE0 1092 aa8.43□□□□□ -1.06
DDX1-204ENST00000459706 MYOM3Q5VTT5 1437 aa8.43□□□□□ -1.06
DDX1-204ENST00000459706 NLRP13Q86W25 1043 aa8.42□□□□□ -1.06
DDX1-204ENST00000459706 NLRP2Q9NX02 1062 aa8.42□□□□□ -1.06
DDX1-204ENST00000459706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.42□□□□□ -1.06
DDX1-204ENST00000459706 MIA2Q96PC5 1412 aa8.42□□□□□ -1.06
DDX1-204ENST00000459706 WDR7Q9Y4E6 1490 aa8.42□□□□□ -1.06
DDX1-204ENST00000459706 MAPKBP1O60336 1514 aa8.42□□□□□ -1.06
DDX1-204ENST00000459706 MYO5CQ9NQX4 1742 aa8.42□□□□□ -1.06
DDX1-204ENST00000459706 CDC42BPAQ5VT25 1732 aa8.41□□□□□ -1.06
DDX1-204ENST00000459706 XYLBO75191 536 aa8.41□□□□□ -1.06
DDX1-204ENST00000459706 FAM157BP0CG42 384 aa8.41□□□□□ -1.06
DDX1-204ENST00000459706 ORC1Q13415 861 aa8.41□□□□□ -1.06
DDX1-204ENST00000459706 TMEM87AQ8NBN3 555 aa8.41□□□□□ -1.06
DDX1-204ENST00000459706 CFHR5Q9BXR6 569 aa8.41□□□□□ -1.06
DDX1-204ENST00000459706 BRD7Q9NPI1 651 aa8.41□□□□□ -1.06
DDX1-204ENST00000459706 VTI1BQ9UEU0 232 aa8.41□□□□□ -1.06
DDX1-204ENST00000459706 DNMT3LQ9UJW3 386 aa8.41□□□□□ -1.06
DDX1-204ENST00000459706 PREX2Q70Z35 1606 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 PTPN23Q9H3S7 1636 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 FGD6Q6ZV73 1430 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 CCNB3Q8WWL7 1395 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 MAN1A2O60476 641 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 GFRA3O60609 400 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 PHACTR2O75167 634 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 KIFC2Q96AC6 838 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 CCDC74AQ96AQ1 378 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 ABI2Q9NYB9 513 aaPredicted RBP8.4□□□□□ -1.06
DDX1-204ENST00000459706 KCNH4Q9UQ05 1017 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 PCDHGC4Q9Y5F7 938 aa8.4□□□□□ -1.06
DDX1-204ENST00000459706 ARAP3Q8WWN8 1544 aa8.39□□□□□ -1.07
DDX1-204ENST00000459706 PHLDB1Q86UU1 1377 aa8.39□□□□□ -1.07
DDX1-204ENST00000459706 BMP1P13497 986 aa8.39□□□□□ -1.07
DDX1-204ENST00000459706 EIF4BP23588 611 aaKnown RBP8.39□□□□□ -1.07
DDX1-204ENST00000459706 ZC3H6P61129 1189 aaKnown RBP8.39□□□□□ -1.07
DDX1-204ENST00000459706 TRIP4Q15650 581 aaPredicted RBP8.39□□□□□ -1.07
DDX1-204ENST00000459706 TTC39BQ5VTQ0 682 aaPredicted RBP8.39□□□□□ -1.07
DDX1-204ENST00000459706 CRELD1Q96HD1 420 aa8.39□□□□□ -1.07
DDX1-204ENST00000459706 GAS2L1Q99501 681 aaPredicted RBP8.39□□□□□ -1.07
DDX1-204ENST00000459706 ZCCHC2Q9C0B9 1178 aaKnown RBP8.39□□□□□ -1.07
DDX1-204ENST00000459706 RUBCNLQ9H714 662 aa8.39□□□□□ -1.07
DDX1-204ENST00000459706 PPP4R2Q9NY27 417 aa8.39□□□□□ -1.07
DDX1-204ENST00000459706 ABCA9Q8IUA7 1624 aa8.39□□□□□ -1.07
DDX1-204ENST00000459706 ABCC10Q5T3U5 1492 aa8.38□□□□□ -1.07
DDX1-204ENST00000459706 ASXL2Q76L83 1435 aa8.38□□□□□ -1.07
DDX1-204ENST00000459706 ATXN7O15265 892 aaPredicted RBP8.38□□□□□ -1.07
DDX1-204ENST00000459706 GALNT12Q8IXK2 581 aa8.38□□□□□ -1.07
DDX1-204ENST00000459706 RNF34Q969K3 372 aa8.38□□□□□ -1.07
DDX1-204ENST00000459706 KLRG1Q96E93 195 aa8.38□□□□□ -1.07
DDX1-204ENST00000459706 GPAMQ9HCL2 828 aa8.38□□□□□ -1.07
DDX1-204ENST00000459706 ATP13A2Q9NQ11 1180 aa8.38□□□□□ -1.07
DDX1-204ENST00000459706 TTC37Q6PGP7 1564 aa8.38□□□□□ -1.07
DDX1-204ENST00000459706 CFAP74Q9C0B2 1584 aa8.38□□□□□ -1.07
DDX1-204ENST00000459706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.38□□□□□ -1.07
DDX1-204ENST00000459706 TCOF1Q13428 1488 aaKnown RBP8.38□□□□□ -1.07
DDX1-204ENST00000459706 SLC35F4A4IF30 521 aa8.37□□□□□ -1.07
DDX1-204ENST00000459706 A6NHS1 94 aa8.37□□□□□ -1.07
DDX1-204ENST00000459706 EFSO43281 561 aa8.37□□□□□ -1.07
DDX1-204ENST00000459706 CCINQ13939 588 aa8.37□□□□□ -1.07
DDX1-204ENST00000459706 LDLRAD1Q5T700 205 aa8.37□□□□□ -1.07
DDX1-204ENST00000459706 CYB5RLQ6IPT4 315 aa8.37□□□□□ -1.07
DDX1-204ENST00000459706 GPATCH8Q9UKJ3 1502 aaKnown RBP8.37□□□□□ -1.07
DDX1-204ENST00000459706 CDC42BPBQ9Y5S2 1711 aa8.37□□□□□ -1.07
DDX1-204ENST00000459706 SENP3-EIF4A1A0A087X0R7 540 aa8.36□□□□□ -1.07
DDX1-204ENST00000459706 PCGF6Q9BYE7 350 aa8.36□□□□□ -1.07
DDX1-204ENST00000459706 C12orf49Q9H741 205 aa8.36□□□□□ -1.07
DDX1-204ENST00000459706 FAM8A1Q9UBU6 413 aa8.36□□□□□ -1.07
DDX1-204ENST00000459706 FOXD3Q9UJU5 478 aaPredicted RBP8.36□□□□□ -1.07
DDX1-204ENST00000459706 PLEKHH2Q8IVE3 1493 aa8.35□□□□□ -1.07
DDX1-204ENST00000459706 EDN3P14138 238 aa8.35□□□□□ -1.07
DDX1-204ENST00000459706 GRNP28799 593 aaKnown RBP8.35□□□□□ -1.07
DDX1-204ENST00000459706 ZNF76P36508 570 aa8.35□□□□□ -1.07
DDX1-204ENST00000459706 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.35□□□□□ -1.07
DDX1-204ENST00000459706 TRIM22Q8IYM9 498 aa8.35□□□□□ -1.07
DDX1-204ENST00000459706 FAM161BQ96MY7 647 aa8.35□□□□□ -1.07
DDX1-204ENST00000459706 SETDB2Q96T68 719 aa8.35□□□□□ -1.07
DDX1-204ENST00000459706 GSX2Q9BZM3 304 aa8.35□□□□□ -1.07
DDX1-204ENST00000459706 NUCKS1Q9H1E3 243 aaKnown RBP8.35□□□□□ -1.07
DDX1-204ENST00000459706 AAASQ9NRG9 546 aa8.35□□□□□ -1.07
DDX1-204ENST00000459706 TMEM63CQ9P1W3 806 aa8.35□□□□□ -1.07
DDX1-204ENST00000459706 USP20Q9Y2K6 914 aa8.35□□□□□ -1.07
DDX1-204ENST00000459706 GLI2P10070 1586 aa8.35□□□□□ -1.07
DDX1-204ENST00000459706 ARHGAP5Q13017 1502 aa8.34□□□□□ -1.07
DDX1-204ENST00000459706 DNMT1P26358 1616 aaKnown RBP8.34□□□□□ -1.07
DDX1-204ENST00000459706 POTECB2RU33 542 aa8.34□□□□□ -1.07
DDX1-204ENST00000459706 CES1P23141 567 aa8.34□□□□□ -1.07
DDX1-204ENST00000459706 ERCC5P28715 1186 aaPredicted RBP8.34□□□□□ -1.07
DDX1-204ENST00000459706 ST13P50502 369 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms