RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 SHTN1A0MZ66 631 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 ANKRD18BA2A2Z9 1011 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 GJB2P29033 226 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 CCT2P78371 535 aaKnown RBP11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 RNF187Q5TA31 235 aaPredicted RBP11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 CNBD1Q8NA66 436 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 CCDC87Q9NVE4 849 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 MYO6Q9UM54 1294 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 ALKQ9UM73 1620 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 GLRX3O76003 335 aaKnown RBP11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 U2AF2P26368 475 aaKnown RBP eCLIP11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 DMTNQ08495 405 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 TTLL12Q14166 644 aaPredicted RBP11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 TNS3Q68CZ2 1445 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 USP48Q86UV5 1035 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 FSIP1Q8NA03 581 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 CCDC43Q96MW1 224 aaKnown RBP11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 ERLIN2O94905 339 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 IFIT1P09914 478 aaKnown RBP11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 KRT32Q14532 448 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 HSP90AA4PQ58FG1 418 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 JDP2Q8WYK2 163 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 CDK5RAP3Q96JB5 506 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 NYXQ9GZU5 481 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 SLC52A2Q9HAB3 445 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 DNAI1Q9UI46 699 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 CLTCL1P53675 1640 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 LMTK2Q8IWU2 1503 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 ENOX2Q16206 610 aaKnown RBP11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 UVSSAQ2YD98 709 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 CAVIN4Q5BKX8 364 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 TICAM2Q86XR7 235 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 ZGPATQ8N5A5 531 aaKnown RBP11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 NECAB1Q8N987 351 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 KIF1BPQ96EK5 621 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 CCDC8Q9H0W5 538 aaPredicted RBP11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 CNPY2Q9Y2B0 182 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 ANKRD62A6NC57 917 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 A1BGP04217 495 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 PHKG2P15735 406 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 STIM1Q13586 685 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 DDX19AQ9NUU7 478 aaKnown RBP11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 PAXBP1Q9Y5B6 917 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 INSRP06213 1382 aa11.28□□□□□ -0.6
MSC-AS1-201ENST00000457356 LOC102724428A0A0B4J2F2 783 aa11.27□□□□□ -0.6
MSC-AS1-201ENST00000457356 ERVV-2B6SEH9 535 aa11.27□□□□□ -0.6
MSC-AS1-201ENST00000457356 SIK1P57059 783 aa11.27□□□□□ -0.6
MSC-AS1-201ENST00000457356 LDHAL6AQ6ZMR3 332 aa11.27□□□□□ -0.6
MSC-AS1-201ENST00000457356 FAM107BQ9H098 131 aa11.27□□□□□ -0.6
MSC-AS1-201ENST00000457356 SSBP05455 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
MSC-AS1-201ENST00000457356 KRT18P05783 430 aaKnown RBP11.27□□□□□ -0.61
MSC-AS1-201ENST00000457356 UTP14AQ9BVJ6 771 aaKnown RBP11.27□□□□□ -0.61
MSC-AS1-201ENST00000457356 SH2B1Q9NRF2 756 aaPredicted RBP11.27□□□□□ -0.61
MSC-AS1-201ENST00000457356 ADAMTS13Q76LX8 1427 aa11.27□□□□□ -0.61
MSC-AS1-201ENST00000457356 SLC3A2P08195 630 aaKnown RBP11.27□□□□□ -0.61
MSC-AS1-201ENST00000457356 SDSP20132 328 aa11.27□□□□□ -0.61
MSC-AS1-201ENST00000457356 CCDC24Q8N4L8 307 aa11.27□□□□□ -0.61
MSC-AS1-201ENST00000457356 CCDC148Q8NFR7 591 aa11.27□□□□□ -0.61
MSC-AS1-201ENST00000457356 RSPH14Q9UHP6 348 aa11.27□□□□□ -0.61
MSC-AS1-201ENST00000457356 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
MSC-AS1-201ENST00000457356 PPRC1Q5VV67 1664 aaKnown RBP11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 EN1Q05925 392 aaPredicted RBP11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 GRM1Q13255 1194 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 CCDC152Q4G0S7 254 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 ZNF496Q96IT1 587 aaPredicted RBP11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 LUC7LQ9NQ29 371 aaKnown RBP11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 PER1O15534 1290 aaPredicted RBP11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 NEMFO60524 1076 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 GTPBP4Q9BZE4 634 aaKnown RBP11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 CCDC113Q9H0I3 377 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 LRP2BPQ9P2M1 347 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 NSFL1CQ9UNZ2 370 aaKnown RBP11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 PIK3C2BO00750 1634 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 PSDA5PKW4 1024 aaPredicted RBP11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 CCDC69A6NI79 296 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 KIF20AO95235 890 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 POLR3DP05423 398 aaPredicted RBP11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 RLBP1P12271 317 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 LIG1P18858 919 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 C8orf76Q96K31 380 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 RBSNQ9H1K0 784 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 DACT1Q9NYF0 836 aa11.26□□□□□ -0.61
MSC-AS1-201ENST00000457356 PHACTR2O75167 634 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 SRRTQ9BXP5 876 aaKnown RBP11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 UNC13BO14795 1591 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 RAB3GAP1Q15042 981 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 ALDH1L2Q3SY69 923 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 ANO6Q4KMQ2 910 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 ARFGAP3Q9NP61 516 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 BCCIPQ9P287 314 aaKnown RBP eCLIP11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 ASAP1Q9ULH1 1129 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 H0YIN7 160 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 PTGS1P23219 599 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 GSDMDP57764 484 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 SPECC1Q5M775 1068 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms