RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 UBAP1LF5GYI3 381 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 ATXN7O15265 892 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 MAPTP10636 758 aaKnown RBP6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 EPB42P16452 691 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 CD33P20138 364 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 TNP2Q05952 138 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 LINC00114Q6XXX2 140 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 SLCO4C1Q6ZQN7 724 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 ZNF438Q7Z4V0 828 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 CMTR1Q8N1G2 835 aaKnown RBP6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 GOLGA6L1Q8N7Z2 621 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 C8orf37Q96NL8 207 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 ZFYVE28Q9HCC9 887 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 STRN4Q9NRL3 753 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 FOXD3Q9UJU5 478 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 AK5Q9Y6K8 562 aa6.06□□□□□ -1.44
HMGB1P15-201ENST00000453854 NEURL1BA8MQ27 555 aa6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 EFSO43281 561 aa6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 EPXP11678 715 aa6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 HDLBPQ00341 1268 aaKnown RBP6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 USPL1Q5W0Q7 1092 aa6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 FIGNL1Q6PIW4 674 aa6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 METTL16Q86W50 562 aaKnown RBP6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 CCDC74AQ96AQ1 378 aa6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 CEP63Q96MT8 703 aa6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 SUV39H2Q9H5I1 410 aa6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 RRAGCQ9HB90 399 aa6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 MRS2Q9HD23 443 aa6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 METTL5Q9NRN9 209 aaKnown RBP6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 TMEM63CQ9P1W3 806 aa6.05□□□□□ -1.44
HMGB1P15-201ENST00000453854 MSTNO14793 375 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 GIPC1O14908 333 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 KHNYNO15037 678 aaKnown RBP6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 XYLBO75191 536 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 CTSHP09668 335 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 FAM157BP0CG42 384 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 ARAFP10398 606 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 FANCCQ00597 558 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 GRIN2CQ14957 1233 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 FCHSD1Q86WN1 690 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 TMEM87AQ8NBN3 555 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 BTBD6Q96KE9 485 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 CHRDQ9H2X0 955 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 BRD7Q9NPI1 651 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 VTI1BQ9UEU0 232 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 GJA3Q9Y6H8 435 aa6.04□□□□□ -1.44
HMGB1P15-201ENST00000453854 PHACTR2O75167 634 aa6.03□□□□□ -1.44
HMGB1P15-201ENST00000453854 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB1P15-201ENST00000453854 NLRP13Q86W25 1043 aa6.03□□□□□ -1.44
HMGB1P15-201ENST00000453854 CRELD1Q96HD1 420 aa6.03□□□□□ -1.44
HMGB1P15-201ENST00000453854 ABI2Q9NYB9 513 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P15-201ENST00000453854 MKL2Q9ULH7 1088 aa6.03□□□□□ -1.44
HMGB1P15-201ENST00000453854 SPG7Q9UQ90 795 aa6.03□□□□□ -1.44
HMGB1P15-201ENST00000453854 AMPD1P23109 780 aa6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 DGKGP49619 791 aa6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 ZC3H6P61129 1189 aaKnown RBP6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 RAD51AP2Q09MP3 1159 aa6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 FAM182BQ5T319 152 aa6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 GALNT12Q8IXK2 581 aa6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 C1orf127Q8N9H9 656 aa6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 EPS8L3Q8TE67 593 aaKnown RBP6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 PMEPA1Q969W9 287 aa6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 OSBPL7Q9BZF2 842 aa6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 CNTN3Q9P232 1028 aa6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 KCNH4Q9UQ05 1017 aa6.02□□□□□ -1.45
HMGB1P15-201ENST00000453854 EIF4BP23588 611 aaKnown RBP6.01□□□□□ -1.45
HMGB1P15-201ENST00000453854 PCBP4P57723 403 aaKnown RBP6.01□□□□□ -1.45
HMGB1P15-201ENST00000453854 SFSWAPQ12872 951 aaKnown RBP6.01□□□□□ -1.45
HMGB1P15-201ENST00000453854 LAMC2Q13753 1193 aa6.01□□□□□ -1.45
HMGB1P15-201ENST00000453854 PI16Q6UXB8 463 aa6.01□□□□□ -1.45
HMGB1P15-201ENST00000453854 GSX2Q9BZM3 304 aa6.01□□□□□ -1.45
HMGB1P15-201ENST00000453854 SRCIN1Q9C0H9 1055 aa6.01□□□□□ -1.45
HMGB1P15-201ENST00000453854 C12orf49Q9H741 205 aa6.01□□□□□ -1.45
HMGB1P15-201ENST00000453854 EREGO14944 169 aa6□□□□□ -1.45
HMGB1P15-201ENST00000453854 ADH6P28332 368 aa6□□□□□ -1.45
HMGB1P15-201ENST00000453854 ERCC5P28715 1186 aaPredicted RBP6□□□□□ -1.45
HMGB1P15-201ENST00000453854 ZNF76P36508 570 aa6□□□□□ -1.45
HMGB1P15-201ENST00000453854 CHSY3Q70JA7 882 aa6□□□□□ -1.45
HMGB1P15-201ENST00000453854 RNF34Q969K3 372 aa6□□□□□ -1.45
HMGB1P15-201ENST00000453854 EFCC1Q9HA90 598 aa6□□□□□ -1.45
HMGB1P15-201ENST00000453854 NLRP2Q9NX02 1062 aa6□□□□□ -1.45
HMGB1P15-201ENST00000453854 USP31Q70CQ4 1352 aa6□□□□□ -1.45
HMGB1P15-201ENST00000453854 ADAM23O75077 832 aa5.99□□□□□ -1.45
HMGB1P15-201ENST00000453854 CCINQ13939 588 aa5.99□□□□□ -1.45
HMGB1P15-201ENST00000453854 ZNF468Q5VIY5 522 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P15-201ENST00000453854 KIAA0319Q5VV43 1072 aa5.99□□□□□ -1.45
HMGB1P15-201ENST00000453854 C9orf131Q5VYM1 1079 aa5.99□□□□□ -1.45
HMGB1P15-201ENST00000453854 NT5DC4Q86YG4 428 aa5.99□□□□□ -1.45
HMGB1P15-201ENST00000453854 OR13H1Q8NG92 308 aa5.99□□□□□ -1.45
HMGB1P15-201ENST00000453854 NPHS2Q9NP85 383 aa5.99□□□□□ -1.45
HMGB1P15-201ENST00000453854 FAM8A1Q9UBU6 413 aa5.99□□□□□ -1.45
HMGB1P15-201ENST00000453854 GNB5O14775 395 aa5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 SASH3O75995 380 aa5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 MAP3K6O95382 1288 aa5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 POLR3DP05423 398 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 HOXD8P13378 290 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 CES1P23141 567 aa5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 TARSP26639 723 aaKnown RBP5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 ST13P50502 369 aaKnown RBP5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 PTPN12Q05209 780 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms