RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 LIMCH1Q9UPQ0 1083 aa12.81□□□□□ -0.36
CHL1-208ENST00000453040 CCT4P50991 539 aaKnown RBP12.81□□□□□ -0.36
CHL1-208ENST00000453040 TTC31Q49AM3 519 aaPredicted RBP12.81□□□□□ -0.36
CHL1-208ENST00000453040 PGBD1Q96JS3 809 aa12.81□□□□□ -0.36
CHL1-208ENST00000453040 CLIC6Q96NY7 704 aa12.81□□□□□ -0.36
CHL1-208ENST00000453040 MAP2K7O14733 419 aa12.81□□□□□ -0.36
CHL1-208ENST00000453040 OAS2P29728 719 aaKnown RBP12.81□□□□□ -0.36
CHL1-208ENST00000453040 ACTN2P35609 894 aa12.81□□□□□ -0.36
CHL1-208ENST00000453040 ADD1P35611 737 aaKnown RBP12.81□□□□□ -0.36
CHL1-208ENST00000453040 PTH1RQ03431 593 aa12.81□□□□□ -0.36
CHL1-208ENST00000453040 TYRO3Q06418 890 aa12.81□□□□□ -0.36
CHL1-208ENST00000453040 MIEF2Q96C03 454 aa12.8□□□□□ -0.36
CHL1-208ENST00000453040 LARP6Q9BRS8 491 aaKnown RBP12.8□□□□□ -0.36
CHL1-208ENST00000453040 ALDH8A1Q9H2A2 487 aaPredicted RBP12.8□□□□□ -0.36
CHL1-208ENST00000453040 ANO2Q9NQ90 1003 aa12.8□□□□□ -0.36
CHL1-208ENST00000453040 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.8□□□□□ -0.36
CHL1-208ENST00000453040 TM6SF1Q9BZW5 370 aa12.8□□□□□ -0.36
CHL1-208ENST00000453040 COL15A1P39059 1388 aa12.8□□□□□ -0.36
CHL1-208ENST00000453040 E4F1Q66K89 784 aaPredicted RBP12.8□□□□□ -0.36
CHL1-208ENST00000453040 MMS22LQ6ZRQ5 1243 aa12.8□□□□□ -0.36
CHL1-208ENST00000453040 LRRC8AQ8IWT6 810 aa12.8□□□□□ -0.36
CHL1-208ENST00000453040 AKAP2Q9Y2D5 859 aa12.8□□□□□ -0.36
CHL1-208ENST00000453040 GNAI2P04899 355 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 GRIK3Q13003 919 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 TNNT3P45378 269 aaPredicted RBP12.79□□□□□ -0.36
CHL1-208ENST00000453040 VPS53Q5VIR6 699 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 TTC19Q6DKK2 380 aaPredicted RBP12.79□□□□□ -0.36
CHL1-208ENST00000453040 ITFG2Q969R8 447 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 SLX1AQ9BQ83 275 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 TPCN1Q9ULQ1 816 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
CHL1-208ENST00000453040 ECM29Q5VYK3 1845 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 GJB2P29033 226 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 NBPF9Q3BBW0 867 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 NUTM2GQ5VZR2 741 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 TAF6LQ9Y6J9 622 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 FOXO3O43524 673 aa12.79□□□□□ -0.36
CHL1-208ENST00000453040 AGLP35573 1532 aa12.78□□□□□ -0.36
CHL1-208ENST00000453040 UBR1Q8IWV7 1749 aa12.78□□□□□ -0.36
CHL1-208ENST00000453040 WASLO00401 505 aaPredicted RBP12.78□□□□□ -0.36
CHL1-208ENST00000453040 EXOC4Q96A65 974 aa12.78□□□□□ -0.36
CHL1-208ENST00000453040 SYTL4Q96C24 671 aaPredicted RBP12.78□□□□□ -0.36
CHL1-208ENST00000453040 PHRF1Q9P1Y6 1649 aaKnown RBP12.78□□□□□ -0.36
CHL1-208ENST00000453040 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
CHL1-208ENST00000453040 TRIM65Q6PJ69 517 aa12.78□□□□□ -0.36
CHL1-208ENST00000453040 NWD2Q9ULI1 1742 aa12.78□□□□□ -0.36
CHL1-208ENST00000453040 CC2D1AQ6P1N0 951 aaPredicted RBP12.78□□□□□ -0.36
CHL1-208ENST00000453040 TADA3O75528 432 aa12.77□□□□□ -0.36
CHL1-208ENST00000453040 BIRC2Q13490 618 aa12.77□□□□□ -0.36
CHL1-208ENST00000453040 BSDC1Q9NW68 430 aaPredicted RBP12.77□□□□□ -0.36
CHL1-208ENST00000453040 MIS18AQ9NYP9 233 aa12.77□□□□□ -0.36
CHL1-208ENST00000453040 RGPD2P0DJD1 1756 aa12.77□□□□□ -0.36
CHL1-208ENST00000453040 N4BP1O75113 896 aaKnown RBP12.77□□□□□ -0.37
CHL1-208ENST00000453040 PPP2R5AQ15172 486 aa12.77□□□□□ -0.37
CHL1-208ENST00000453040 NAIF1Q69YI7 327 aaPredicted RBP12.77□□□□□ -0.37
CHL1-208ENST00000453040 DHX40Q8IX18 779 aaKnown RBP12.77□□□□□ -0.37
CHL1-208ENST00000453040 CCAR2Q8N163 923 aaKnown RBP12.77□□□□□ -0.37
CHL1-208ENST00000453040 MCM8Q9UJA3 840 aa12.77□□□□□ -0.37
CHL1-208ENST00000453040 FIBPO43427 364 aa12.77□□□□□ -0.37
CHL1-208ENST00000453040 SLU7O95391 586 aaKnown RBP12.77□□□□□ -0.37
CHL1-208ENST00000453040 PAX7P23759 505 aa12.77□□□□□ -0.37
CHL1-208ENST00000453040 CLSTN2Q9H4D0 955 aa12.77□□□□□ -0.37
CHL1-208ENST00000453040 SNW1Q13573 536 aaKnown RBP12.76□□□□□ -0.37
CHL1-208ENST00000453040 TOB2Q14106 344 aaPredicted RBP12.76□□□□□ -0.37
CHL1-208ENST00000453040 ZKSCAN8Q15776 578 aaPredicted RBP12.76□□□□□ -0.37
CHL1-208ENST00000453040 MTHFSDQ2M296 383 aaKnown RBP12.76□□□□□ -0.37
CHL1-208ENST00000453040 TBC1D25Q3MII6 688 aa12.76□□□□□ -0.37
CHL1-208ENST00000453040 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
CHL1-208ENST00000453040 HMMRO75330 724 aa12.76□□□□□ -0.37
CHL1-208ENST00000453040 USP6P35125 1406 aa12.76□□□□□ -0.37
CHL1-208ENST00000453040 CCDC91Q7Z6B0 441 aa12.76□□□□□ -0.37
CHL1-208ENST00000453040 NR1I2O75469 434 aa12.76□□□□□ -0.37
CHL1-208ENST00000453040 HNRNPH1P31943 449 aaKnown RBP12.76□□□□□ -0.37
CHL1-208ENST00000453040 ANO6Q4KMQ2 910 aa12.76□□□□□ -0.37
CHL1-208ENST00000453040 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
CHL1-208ENST00000453040 ZNF483Q8TF39 744 aaPredicted RBP12.76□□□□□ -0.37
CHL1-208ENST00000453040 PDRG1Q9NUG6 133 aa12.76□□□□□ -0.37
CHL1-208ENST00000453040 MED23Q9ULK4 1368 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 TDO2P48775 406 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 FNTAP49354 379 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 A1CFQ9NQ94 594 aaKnown RBP12.75□□□□□ -0.37
CHL1-208ENST00000453040 CCDC192P0DO97 292 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 SMC1AQ14683 1233 aaKnown RBP12.75□□□□□ -0.37
CHL1-208ENST00000453040 FAM173BQ6P4H8 233 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 CADPS2Q86UW7 1296 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 CAMTA1Q9Y6Y1 1673 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 COQ9O75208 318 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 CCNHP51946 323 aaPredicted RBP12.75□□□□□ -0.37
CHL1-208ENST00000453040 FLIIQ13045 1269 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 ISM2Q6H9L7 571 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 C4AP0C0L4 1744 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 C4BP0C0L5 1744 aa12.75□□□□□ -0.37
CHL1-208ENST00000453040 IGSF1Q8N6C5 1336 aa12.74□□□□□ -0.37
CHL1-208ENST00000453040 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
CHL1-208ENST00000453040 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.74□□□□□ -0.37
CHL1-208ENST00000453040 LTN1O94822 1766 aa12.74□□□□□ -0.37
CHL1-208ENST00000453040 PTPRUQ92729 1446 aa12.74□□□□□ -0.37
CHL1-208ENST00000453040 MRFAP1L1Q96HT8 127 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms