RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 MROH2AA6NES4 1674 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 LMTK2Q8IWU2 1503 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 CCDC196A0A1B0GTZ2 297 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 DIAPH1O60610 1272 aaKnown RBP10.03□□□□□ -0.8
LSM5-208ENST00000450169 URI1O94763 535 aaPredicted RBP10.03□□□□□ -0.8
LSM5-208ENST00000450169 DSG2Q14126 1118 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 KRT24Q2M2I5 525 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 DNAJC21Q5F1R6 531 aaKnown RBP10.03□□□□□ -0.8
LSM5-208ENST00000450169 CCDC150Q8NCX0 1101 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 EPC1Q9H2F5 836 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 TSPOAP1O95153 1857 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 NRDCO43847 1150 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 DTNBO60941 627 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 FCHSD2O94868 740 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 FLIIQ13045 1269 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 FAM173BQ6P4H8 233 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 FERMT3Q86UX7 667 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 C8orf58Q8NAV2 365 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 BICD2Q8TD16 824 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 MEIS3Q99687 375 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 IL25Q9H293 177 aa10.03□□□□□ -0.8
LSM5-208ENST00000450169 GPHNQ9NQX3 736 aaPredicted RBP10.03□□□□□ -0.8
LSM5-208ENST00000450169 KIAA0232Q92628 1395 aa10.02□□□□□ -0.8
LSM5-208ENST00000450169 IRF6O14896 467 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 CCP110O43303 1012 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 STX1AQ16623 288 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 TADA2BQ86TJ2 420 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 DNAAF4Q8WXU2 420 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 TRPC6Q9Y210 931 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 NEURL4Q96JN8 1562 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 ANKRD65E5RJM6 399 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 SFPQP23246 707 aaKnown RBP eCLIP10.02□□□□□ -0.81
LSM5-208ENST00000450169 PRKAR2BP31323 418 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 GNL2Q13823 731 aaKnown RBP10.02□□□□□ -0.81
LSM5-208ENST00000450169 LONRF2Q1L5Z9 754 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 HSP90AB3PQ58FF7 597 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 LARP1BQ659C4 914 aaKnown RBP10.02□□□□□ -0.81
LSM5-208ENST00000450169 CDC37L1Q7L3B6 337 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 LEO1Q8WVC0 666 aaPredicted RBP10.02□□□□□ -0.81
LSM5-208ENST00000450169 PRAM1Q96QH2 718 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 SH2B1Q9NRF2 756 aaPredicted RBP10.02□□□□□ -0.81
LSM5-208ENST00000450169 HYPKQ9NX55 129 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 TRAK1Q9UPV9 953 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.81
LSM5-208ENST00000450169 NPATQ14207 1427 aa10.01□□□□□ -0.81
LSM5-208ENST00000450169 MAP2K7O14733 419 aa10.01□□□□□ -0.81
LSM5-208ENST00000450169 SRGAP3O43295 1099 aa10.01□□□□□ -0.81
LSM5-208ENST00000450169 ZNF853P0CG23 659 aa10.01□□□□□ -0.81
LSM5-208ENST00000450169 GGT6Q6P531 493 aa10.01□□□□□ -0.81
LSM5-208ENST00000450169 NBPF11Q86T75 865 aa10.01□□□□□ -0.81
LSM5-208ENST00000450169 UNC5CLQ8IV45 518 aa10.01□□□□□ -0.81
LSM5-208ENST00000450169 DHX40Q8IX18 779 aaKnown RBP10.01□□□□□ -0.81
LSM5-208ENST00000450169 PARD6BQ9BYG5 372 aa10.01□□□□□ -0.81
LSM5-208ENST00000450169 MINK1Q8N4C8 1332 aaPredicted RBP10.01□□□□□ -0.81
LSM5-208ENST00000450169 KIF1BO60333 1816 aa10.01□□□□□ -0.81
LSM5-208ENST00000450169 CCDC189A1A4V9 331 aa10□□□□□ -0.81
LSM5-208ENST00000450169 ABCC3O15438 1527 aa10□□□□□ -0.81
LSM5-208ENST00000450169 APOBRQ0VD83 1088 aa10□□□□□ -0.81
LSM5-208ENST00000450169 MAP2K5Q13163 448 aa10□□□□□ -0.81
LSM5-208ENST00000450169 NFE2L2Q16236 605 aa10□□□□□ -0.81
LSM5-208ENST00000450169 CCDC30Q5VVM6 783 aa10□□□□□ -0.81
LSM5-208ENST00000450169 JAKMIP3Q5VZ66 844 aa10□□□□□ -0.81
LSM5-208ENST00000450169 ARMCX5Q6P1M9 558 aa10□□□□□ -0.81
LSM5-208ENST00000450169 RPAINQ86UA6 219 aa10□□□□□ -0.81
LSM5-208ENST00000450169 ZSCAN31Q96LW9 406 aaPredicted RBP10□□□□□ -0.81
LSM5-208ENST00000450169 SIGLEC1Q9BZZ2 1709 aa10□□□□□ -0.81
LSM5-208ENST00000450169 PDE11AQ9HCR9 933 aa10□□□□□ -0.81
LSM5-208ENST00000450169 IFT172Q9UG01 1749 aa10□□□□□ -0.81
LSM5-208ENST00000450169 CDK12Q9NYV4 1490 aaPredicted RBP10□□□□□ -0.81
LSM5-208ENST00000450169 A0A087WUV0 522 aaPredicted RBP10□□□□□ -0.81
LSM5-208ENST00000450169 CCDC151A5D8V7 595 aa10□□□□□ -0.81
LSM5-208ENST00000450169 FANCGO15287 622 aa10□□□□□ -0.81
LSM5-208ENST00000450169 MNAT1P51948 309 aa10□□□□□ -0.81
LSM5-208ENST00000450169 TRDNQ13061 729 aa10□□□□□ -0.81
LSM5-208ENST00000450169 TTLL12Q14166 644 aaPredicted RBP10□□□□□ -0.81
LSM5-208ENST00000450169 DHX8Q14562 1220 aaKnown RBP10□□□□□ -0.81
LSM5-208ENST00000450169 TRIM65Q6PJ69 517 aa10□□□□□ -0.81
LSM5-208ENST00000450169 MICALL1Q8N3F8 863 aa10□□□□□ -0.81
LSM5-208ENST00000450169 RABGGTAQ92696 567 aa10□□□□□ -0.81
LSM5-208ENST00000450169 LRRCC1Q9C099 1032 aa10□□□□□ -0.81
LSM5-208ENST00000450169 GGNBP2Q9H3C7 697 aa10□□□□□ -0.81
LSM5-208ENST00000450169 TFIP11Q9UBB9 837 aaKnown RBP10□□□□□ -0.81
LSM5-208ENST00000450169 SETBP1Q9Y6X0 1596 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 ADGRL3Q9HAR2 1447 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 EVC2Q86UK5 1308 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 CPA1P15085 419 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 PDCP20941 246 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 FAM69CQ0P6D2 419 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 AMHR2Q16671 573 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 GRIPAP1Q4V328 841 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 LRRC31Q6UY01 552 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 RSRC2Q7L4I2 434 aaKnown RBP9.99□□□□□ -0.81
LSM5-208ENST00000450169 PGBD1Q96JS3 809 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 AKAP2Q9Y2D5 859 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 CAMSAP1Q5T5Y3 1602 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 EIF3JO75822 258 aaKnown RBP9.99□□□□□ -0.81
LSM5-208ENST00000450169 ST3GAL1Q11201 340 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 BRD3Q15059 726 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 VPS53Q5VIR6 699 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 FAM107BQ9H098 131 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms