RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 H7C1D1 291 aa22.11■■□□□ 1.13
CLTCL1-203ENST00000449918 ECE2O60344 883 aa22.11■■□□□ 1.13
CLTCL1-203ENST00000449918 DOK7Q18PE1 504 aa22.11■■□□□ 1.13
CLTCL1-203ENST00000449918 GREM2Q9H772 168 aa22.11■■□□□ 1.13
CLTCL1-203ENST00000449918 MKRN1Q9UHC7 482 aaKnown RBP22.11■■□□□ 1.13
CLTCL1-203ENST00000449918 CNOT7Q9UIV1 285 aaKnown RBP22.11■■□□□ 1.13
CLTCL1-203ENST00000449918 LTBP1Q14766 1721 aa22.11■■□□□ 1.13
CLTCL1-203ENST00000449918 XDHP47989 1333 aa22.1■■□□□ 1.13
CLTCL1-203ENST00000449918 DPF2Q92785 391 aa22.1■■□□□ 1.13
CLTCL1-203ENST00000449918 PLA2G12BQ9BX93 195 aa22.1■■□□□ 1.13
CLTCL1-203ENST00000449918 BSDC1Q9NW68 430 aaPredicted RBP22.1■■□□□ 1.13
CLTCL1-203ENST00000449918 COL4A1P02462 1669 aa22.1■■□□□ 1.13
CLTCL1-203ENST00000449918 RTL9Q8NET4 1388 aa22.1■■□□□ 1.13
CLTCL1-203ENST00000449918 PSMD14O00487 310 aa22.09■■□□□ 1.13
CLTCL1-203ENST00000449918 ATP2B4P23634 1241 aa22.09■■□□□ 1.13
CLTCL1-203ENST00000449918 GPR101Q96P66 508 aaPredicted RBP22.09■■□□□ 1.13
CLTCL1-203ENST00000449918 ZNF521Q96K83 1311 aa22.08■■□□□ 1.13
CLTCL1-203ENST00000449918 RPS12P25398 132 aaKnown RBP22.08■■□□□ 1.13
CLTCL1-203ENST00000449918 ZC3H15Q8WU90 426 aaKnown RBP22.08■■□□□ 1.13
CLTCL1-203ENST00000449918 ZBTB12Q9Y330 459 aaPredicted RBP22.08■■□□□ 1.13
CLTCL1-203ENST00000449918 IGHMBP2P38935 993 aaKnown RBP22.07■■□□□ 1.12
CLTCL1-203ENST00000449918 CASP7P55210 303 aa22.07■■□□□ 1.12
CLTCL1-203ENST00000449918 MICALL2Q8IY33 904 aa22.07■■□□□ 1.12
CLTCL1-203ENST00000449918 MINPP1Q9UNW1 487 aa22.07■■□□□ 1.12
CLTCL1-203ENST00000449918 CNTNAP1P78357 1384 aa22.07■■□□□ 1.12
CLTCL1-203ENST00000449918 CACNA1FO60840 1977 aa22.07■■□□□ 1.12
CLTCL1-203ENST00000449918 F6X3S4 739 aa22.06■■□□□ 1.12
CLTCL1-203ENST00000449918 BEND3Q5T5X7 828 aa22.06■■□□□ 1.12
CLTCL1-203ENST00000449918 PGAP2Q9UHJ9 254 aa22.06■■□□□ 1.12
CLTCL1-203ENST00000449918 CSF1RP07333 972 aa22.05■■□□□ 1.12
CLTCL1-203ENST00000449918 ITGA6P23229 1130 aa22.05■■□□□ 1.12
CLTCL1-203ENST00000449918 KCNQ5Q9NR82 932 aa22.05■■□□□ 1.12
CLTCL1-203ENST00000449918 ABT1Q9ULW3 272 aaKnown RBP22.05■■□□□ 1.12
CLTCL1-203ENST00000449918 E9PSI1 815 aa22.04■■□□□ 1.12
CLTCL1-203ENST00000449918 VIL1P09327 827 aaKnown RBP22.04■■□□□ 1.12
CLTCL1-203ENST00000449918 DEFB115Q30KQ5 88 aa22.04■■□□□ 1.12
CLTCL1-203ENST00000449918 MPHOSPH8Q99549 860 aa22.04■■□□□ 1.12
CLTCL1-203ENST00000449918 HSPA1AP0DMV8 641 aaKnown RBP22.03■■□□□ 1.12
CLTCL1-203ENST00000449918 HSPA1BP0DMV9 641 aaKnown RBP22.03■■□□□ 1.12
CLTCL1-203ENST00000449918 HIRAP54198 1017 aaPredicted RBP22.03■■□□□ 1.12
CLTCL1-203ENST00000449918 FAM161AQ3B820 660 aa22.03■■□□□ 1.12
CLTCL1-203ENST00000449918 TRPM4Q8TD43 1214 aa22.03■■□□□ 1.12
CLTCL1-203ENST00000449918 SHTN1A0MZ66 631 aa22.02■■□□□ 1.12
CLTCL1-203ENST00000449918 ANKRD18BA2A2Z9 1011 aa22.02■■□□□ 1.12
CLTCL1-203ENST00000449918 RASSF10A6NK89 507 aa22.02■■□□□ 1.12
CLTCL1-203ENST00000449918 TRAF5O00463 557 aa22.02■■□□□ 1.12
CLTCL1-203ENST00000449918 VEGFBP49765 207 aa22.02■■□□□ 1.12
CLTCL1-203ENST00000449918 IFFO2Q5TF58 517 aa22.02■■□□□ 1.12
CLTCL1-203ENST00000449918 CDC37L1Q7L3B6 337 aa22.02■■□□□ 1.12
CLTCL1-203ENST00000449918 PODNQ7Z5L7 613 aa22.02■■□□□ 1.12
CLTCL1-203ENST00000449918 ANKRD2Q9GZV1 360 aa22.02■■□□□ 1.12
CLTCL1-203ENST00000449918 LEMD3Q9Y2U8 911 aa22.02■■□□□ 1.12
CLTCL1-203ENST00000449918 CCT4P50991 539 aaKnown RBP22.01■■□□□ 1.11
CLTCL1-203ENST00000449918 SLC4A10Q6U841 1118 aa22.01■■□□□ 1.11
CLTCL1-203ENST00000449918 SAMD7Q7Z3H4 446 aa22.01■■□□□ 1.11
CLTCL1-203ENST00000449918 GRM8O00222 908 aa22■■□□□ 1.11
CLTCL1-203ENST00000449918 ALDH1L1O75891 902 aa22■■□□□ 1.11
CLTCL1-203ENST00000449918 FMR1Q06787 632 aaKnown RBP eCLIP22■■□□□ 1.11
CLTCL1-203ENST00000449918 IFIT5Q13325 482 aaKnown RBP22■■□□□ 1.11
CLTCL1-203ENST00000449918 TBC1D10BQ4KMP7 808 aaPredicted RBP22■■□□□ 1.11
CLTCL1-203ENST00000449918 CST9Q5W186 159 aa22■■□□□ 1.11
CLTCL1-203ENST00000449918 GLIS2Q9BZE0 524 aaPredicted RBP22■■□□□ 1.11
CLTCL1-203ENST00000449918 C9orf78Q9NZ63 289 aaPredicted RBP22■■□□□ 1.11
CLTCL1-203ENST00000449918 MED23Q9ULK4 1368 aa21.99■■□□□ 1.11
CLTCL1-203ENST00000449918 CCER2I3L3R5 266 aa21.99■■□□□ 1.11
CLTCL1-203ENST00000449918 FOXO4P98177 505 aa21.99■■□□□ 1.11
CLTCL1-203ENST00000449918 RBM26Q5T8P6 1007 aaKnown RBP21.99■■□□□ 1.11
CLTCL1-203ENST00000449918 RSBN1LQ6PCB5 846 aaPredicted RBP21.99■■□□□ 1.11
CLTCL1-203ENST00000449918 AGBL3Q8NEM8 1001 aa21.99■■□□□ 1.11
CLTCL1-203ENST00000449918 SRCIN1Q9C0H9 1055 aa21.99■■□□□ 1.11
CLTCL1-203ENST00000449918 CHMP3Q9Y3E7 222 aa21.99■■□□□ 1.11
CLTCL1-203ENST00000449918 MYH3P11055 1940 aa21.98■■□□□ 1.11
CLTCL1-203ENST00000449918 USP17L3A6NCW0 530 aa21.98■■□□□ 1.11
CLTCL1-203ENST00000449918 USP17L4A6NCW7 530 aa21.98■■□□□ 1.11
CLTCL1-203ENST00000449918 SLFN5Q08AF3 891 aa21.98■■□□□ 1.11
CLTCL1-203ENST00000449918 USP17L1Q7RTZ2 530 aa21.98■■□□□ 1.11
CLTCL1-203ENST00000449918 WTIPA6NIX2 430 aaPredicted RBP21.97■■□□□ 1.11
CLTCL1-203ENST00000449918 CELF2O95319 508 aaKnown RBP21.97■■□□□ 1.11
CLTCL1-203ENST00000449918 COA1Q9GZY4 146 aa21.97■■□□□ 1.11
CLTCL1-203ENST00000449918 ZNF804BA4D1E1 1349 aa21.97■■□□□ 1.11
CLTCL1-203ENST00000449918 PCNTO95613 3336 aa21.97■■□□□ 1.11
CLTCL1-203ENST00000449918 ECE1P42892 770 aa21.96■■□□□ 1.11
CLTCL1-203ENST00000449918 KCNJ4P48050 445 aa21.96■■□□□ 1.11
CLTCL1-203ENST00000449918 CCDC57Q2TAC2 916 aa21.96■■□□□ 1.11
CLTCL1-203ENST00000449918 KIF4BQ2VIQ3 1234 aa21.96■■□□□ 1.11
CLTCL1-203ENST00000449918 LMBR1LQ6UX01 489 aa21.96■■□□□ 1.11
CLTCL1-203ENST00000449918 MRPL50Q8N5N7 158 aaKnown RBP21.96■■□□□ 1.11
CLTCL1-203ENST00000449918 DCPSQ96C86 337 aaKnown RBP21.96■■□□□ 1.11
CLTCL1-203ENST00000449918 TLL2Q9Y6L7 1015 aa21.96■■□□□ 1.11
CLTCL1-203ENST00000449918 WDR33Q9C0J8 1336 aaKnown RBP21.96■■□□□ 1.11
CLTCL1-203ENST00000449918 EGFRP00533 1210 aa21.95■■□□□ 1.1
CLTCL1-203ENST00000449918 ZNF280AP59817 542 aaPredicted RBP21.95■■□□□ 1.1
CLTCL1-203ENST00000449918 CHRNDQ07001 517 aa21.95■■□□□ 1.1
CLTCL1-203ENST00000449918 PAXIP1Q6ZW49 1069 aaPredicted RBP21.95■■□□□ 1.1
CLTCL1-203ENST00000449918 KRT26Q7Z3Y9 468 aa21.95■■□□□ 1.1
CLTCL1-203ENST00000449918 USP48Q86UV5 1035 aa21.95■■□□□ 1.1
CLTCL1-203ENST00000449918 AIDAQ96BJ3 306 aa21.95■■□□□ 1.1
CLTCL1-203ENST00000449918 PTPRCP08575 1304 aa21.95■■□□□ 1.1
CLTCL1-203ENST00000449918 USP17L8P0C7I0 530 aa21.94■■□□□ 1.1
CLTCL1-203ENST00000449918 TAF7LQ5H9L4 462 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms