RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 SPTLC3Q9NUV7 552 aa15.73■□□□□ 0.11
DDX56-206ENST00000446987 CGNQ9P2M7 1197 aaKnown RBP15.73■□□□□ 0.11
DDX56-206ENST00000446987 ARFGEF1Q9Y6D6 1849 aa15.72■□□□□ 0.11
DDX56-206ENST00000446987 PARP10Q53GL7 1025 aa15.72■□□□□ 0.11
DDX56-206ENST00000446987 SYNE4Q8N205 404 aa15.72■□□□□ 0.11
DDX56-206ENST00000446987 MYD88Q99836 296 aa15.72■□□□□ 0.11
DDX56-206ENST00000446987 ARID3AQ99856 593 aa15.72■□□□□ 0.11
DDX56-206ENST00000446987 COL4A1P02462 1669 aa15.72■□□□□ 0.11
DDX56-206ENST00000446987 F6X3S4 739 aa15.71■□□□□ 0.11
DDX56-206ENST00000446987 IRX5P78411 483 aaPredicted RBP15.71■□□□□ 0.11
DDX56-206ENST00000446987 TRIM28Q13263 835 aaKnown RBP15.71■□□□□ 0.11
DDX56-206ENST00000446987 FKBP5Q13451 457 aaPredicted RBP15.71■□□□□ 0.11
DDX56-206ENST00000446987 ERFEQ4G0M1 354 aa15.71■□□□□ 0.11
DDX56-206ENST00000446987 DDX58O95786 925 aaKnown RBP15.71■□□□□ 0.11
DDX56-206ENST00000446987 DPEP1P16444 411 aa15.71■□□□□ 0.11
DDX56-206ENST00000446987 CHRNA5P30532 468 aa15.71■□□□□ 0.11
DDX56-206ENST00000446987 BRPF1P55201 1214 aaPredicted RBP15.71■□□□□ 0.11
DDX56-206ENST00000446987 HDAC1Q13547 482 aaPredicted RBP15.71■□□□□ 0.11
DDX56-206ENST00000446987 C3orf67Q6ZVT6 689 aa15.71■□□□□ 0.11
DDX56-206ENST00000446987 PAXIP1Q6ZW49 1069 aaPredicted RBP15.71■□□□□ 0.11
DDX56-206ENST00000446987 PANK1Q8TE04 598 aa15.71■□□□□ 0.11
DDX56-206ENST00000446987 DIAPH3Q9NSV4 1193 aa15.71■□□□□ 0.11
DDX56-206ENST00000446987 LMBRD1Q9NUN5 540 aa15.71■□□□□ 0.11
DDX56-206ENST00000446987 A0A0G2JLW4 131 aa15.7■□□□□ 0.1
DDX56-206ENST00000446987 CYP2E1P05181 493 aaPredicted RBP15.7■□□□□ 0.1
DDX56-206ENST00000446987 TGFB2P61812 414 aa15.7■□□□□ 0.1
DDX56-206ENST00000446987 DNAAF4Q8WXU2 420 aa15.7■□□□□ 0.1
DDX56-206ENST00000446987 BRIP1Q9BX63 1249 aa15.7■□□□□ 0.1
DDX56-206ENST00000446987 SMC4Q9NTJ3 1288 aa15.7■□□□□ 0.1
DDX56-206ENST00000446987 KLRG2A4D1S0 409 aaPredicted RBP15.69■□□□□ 0.1
DDX56-206ENST00000446987 CTIFO43310 598 aaKnown RBP15.69■□□□□ 0.1
DDX56-206ENST00000446987 CWF19L2Q2TBE0 894 aaKnown RBP15.69■□□□□ 0.1
DDX56-206ENST00000446987 ZNF771Q7L3S4 317 aaPredicted RBP15.69■□□□□ 0.1
DDX56-206ENST00000446987 TULP2O00295 520 aa15.69■□□□□ 0.1
DDX56-206ENST00000446987 IRX3P78415 501 aaPredicted RBP15.69■□□□□ 0.1
DDX56-206ENST00000446987 UVSSAQ2YD98 709 aa15.69■□□□□ 0.1
DDX56-206ENST00000446987 TPTE2Q6XPS3 522 aa15.69■□□□□ 0.1
DDX56-206ENST00000446987 UTP14AQ9BVJ6 771 aaKnown RBP15.69■□□□□ 0.1
DDX56-206ENST00000446987 NYXQ9GZU5 481 aa15.69■□□□□ 0.1
DDX56-206ENST00000446987 MYH3P11055 1940 aa15.69■□□□□ 0.1
DDX56-206ENST00000446987 SLX4Q8IY92 1834 aa15.69■□□□□ 0.1
DDX56-206ENST00000446987 TAF1P21675 1872 aa15.68■□□□□ 0.1
DDX56-206ENST00000446987 NEURL1BA8MQ27 555 aa15.68■□□□□ 0.1
DDX56-206ENST00000446987 YBX3P16989 372 aaKnown RBP eCLIP15.68■□□□□ 0.1
DDX56-206ENST00000446987 ST5P78524 1137 aa15.68■□□□□ 0.1
DDX56-206ENST00000446987 NOLC1Q14978 699 aaKnown RBP eCLIP15.68■□□□□ 0.1
DDX56-206ENST00000446987 CAVIN1Q6NZI2 390 aaKnown RBP15.68■□□□□ 0.1
DDX56-206ENST00000446987 TIGD1Q96MW7 591 aa15.68■□□□□ 0.1
DDX56-206ENST00000446987 BEND3Q5T5X7 828 aa15.67■□□□□ 0.1
DDX56-206ENST00000446987 PPP1R42Q7Z4L9 355 aa15.67■□□□□ 0.1
DDX56-206ENST00000446987 CCDC191Q8NCU4 936 aa15.67■□□□□ 0.1
DDX56-206ENST00000446987 WWC3Q9ULE0 1092 aa15.67■□□□□ 0.1
DDX56-206ENST00000446987 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.67■□□□□ 0.1
DDX56-206ENST00000446987 PTPRCP08575 1304 aa15.67■□□□□ 0.1
DDX56-206ENST00000446987 VGLL3A8MV65 326 aa15.67■□□□□ 0.1
DDX56-206ENST00000446987 CRY2Q49AN0 593 aa15.67■□□□□ 0.1
DDX56-206ENST00000446987 KIF2CQ99661 725 aa15.67■□□□□ 0.1
DDX56-206ENST00000446987 YY1AP1Q9H869 796 aa15.67■□□□□ 0.1
DDX56-206ENST00000446987 CWC22Q9HCG8 908 aaKnown RBP15.67■□□□□ 0.1
DDX56-206ENST00000446987 CALCOCO1Q9P1Z2 691 aa15.67■□□□□ 0.1
DDX56-206ENST00000446987 MBD3O95983 291 aa15.66■□□□□ 0.1
DDX56-206ENST00000446987 SLC10A5Q5PT55 438 aa15.66■□□□□ 0.1
DDX56-206ENST00000446987 FAM89AQ96GI7 184 aa15.66■□□□□ 0.1
DDX56-206ENST00000446987 TRMT112Q9UI30 125 aaKnown RBP15.66■□□□□ 0.1
DDX56-206ENST00000446987 TNNQ9UQP3 1299 aa15.66■□□□□ 0.1
DDX56-206ENST00000446987 SH3TC1Q8TE82 1336 aa15.66■□□□□ 0.1
DDX56-206ENST00000446987 SRGNP10124 158 aa15.65■□□□□ 0.1
DDX56-206ENST00000446987 CASP7P55210 303 aa15.65■□□□□ 0.1
DDX56-206ENST00000446987 C2CD5Q86YS7 1000 aa15.65■□□□□ 0.1
DDX56-206ENST00000446987 FAM184AQ8NB25 1140 aa15.65■□□□□ 0.1
DDX56-206ENST00000446987 LINS1Q8NG48 757 aa15.65■□□□□ 0.1
DDX56-206ENST00000446987 CWC25Q9NXE8 425 aaPredicted RBP15.65■□□□□ 0.1
DDX56-206ENST00000446987 NOB1Q9ULX3 412 aaKnown RBP15.65■□□□□ 0.1
DDX56-206ENST00000446987 HCLS1P14317 486 aaPredicted RBP15.65■□□□□ 0.1
DDX56-206ENST00000446987 ZBTB38Q8NAP3 1195 aaPredicted RBP15.65■□□□□ 0.1
DDX56-206ENST00000446987 JARID2Q92833 1246 aaPredicted RBP15.65■□□□□ 0.1
DDX56-206ENST00000446987 PCCAP05165 728 aaPredicted RBP15.64■□□□□ 0.09
DDX56-206ENST00000446987 PTMAP06454 111 aaKnown RBP15.64■□□□□ 0.09
DDX56-206ENST00000446987 SLFN14P0C7P3 912 aa15.64■□□□□ 0.09
DDX56-206ENST00000446987 PDE6BP35913 854 aa15.64■□□□□ 0.09
DDX56-206ENST00000446987 CHAF1AQ13111 956 aaPredicted RBP15.64■□□□□ 0.09
DDX56-206ENST00000446987 GCKRQ14397 625 aa15.64■□□□□ 0.09
DDX56-206ENST00000446987 RGS22Q8NE09 1264 aa15.64■□□□□ 0.09
DDX56-206ENST00000446987 NPHP1O15259 732 aa15.63■□□□□ 0.09
DDX56-206ENST00000446987 MVPQ14764 893 aaKnown RBP15.63■□□□□ 0.09
DDX56-206ENST00000446987 SLC51AQ86UW1 340 aa15.63■□□□□ 0.09
DDX56-206ENST00000446987 LRRC37AA6NMS7 1700 aa15.63■□□□□ 0.09
DDX56-206ENST00000446987 SNED1Q8TER0 1413 aa15.63■□□□□ 0.09
DDX56-206ENST00000446987 TPM3P06753 285 aa15.63■□□□□ 0.09
DDX56-206ENST00000446987 KCNJ4P48050 445 aa15.63■□□□□ 0.09
DDX56-206ENST00000446987 NEXNQ0ZGT2 675 aa15.63■□□□□ 0.09
DDX56-206ENST00000446987 ABCC4O15439 1325 aa15.63■□□□□ 0.09
DDX56-206ENST00000446987 CDHR2Q9BYE9 1310 aa15.63■□□□□ 0.09
DDX56-206ENST00000446987 FER1L6Q2WGJ9 1857 aa15.62■□□□□ 0.09
DDX56-206ENST00000446987 H0YIN7 160 aa15.62■□□□□ 0.09
DDX56-206ENST00000446987 H7C1W4 665 aa15.62■□□□□ 0.09
DDX56-206ENST00000446987 MORC2Q9Y6X9 1032 aaPredicted RBP15.62■□□□□ 0.09
DDX56-206ENST00000446987 IRS4O14654 1257 aaPredicted RBP15.61■□□□□ 0.09
DDX56-206ENST00000446987 TRIM27P14373 513 aa15.61■□□□□ 0.09
DDX56-206ENST00000446987 BMP2KLQ5H9B9 411 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms