RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 TTC14Q96N46 770 aa12.51□□□□□ -0.41
SYNE2-206ENST00000441438 PTPRHQ9HD43 1115 aa12.51□□□□□ -0.41
SYNE2-206ENST00000441438 SMC4Q9NTJ3 1288 aa12.51□□□□□ -0.41
SYNE2-206ENST00000441438 DONSONQ9NYP3 566 aa12.51□□□□□ -0.41
SYNE2-206ENST00000441438 GRXCR2A6NFK2 248 aa12.5□□□□□ -0.41
SYNE2-206ENST00000441438 TNNI2P48788 182 aa12.5□□□□□ -0.41
SYNE2-206ENST00000441438 DDB1Q16531 1140 aa12.5□□□□□ -0.41
SYNE2-206ENST00000441438 ERCC4Q92889 916 aaPredicted RBP12.5□□□□□ -0.41
SYNE2-206ENST00000441438 TBC1D20Q96BZ9 403 aa12.5□□□□□ -0.41
SYNE2-206ENST00000441438 NCAPGQ9BPX3 1015 aa12.5□□□□□ -0.41
SYNE2-206ENST00000441438 ZNF644Q9H582 1327 aaPredicted RBP12.5□□□□□ -0.41
SYNE2-206ENST00000441438 ZFYVE9O95405 1425 aa12.5□□□□□ -0.41
SYNE2-206ENST00000441438 RPN1P04843 607 aaKnown RBP12.5□□□□□ -0.41
SYNE2-206ENST00000441438 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
SYNE2-206ENST00000441438 Q3C1V9 767 aa12.5□□□□□ -0.41
SYNE2-206ENST00000441438 TMEM95Q3KNT9 176 aa12.5□□□□□ -0.41
SYNE2-206ENST00000441438 STAG2Q8N3U4 1231 aa12.5□□□□□ -0.41
SYNE2-206ENST00000441438 OSBPL2Q9H1P3 480 aa12.5□□□□□ -0.41
SYNE2-206ENST00000441438 COMMD8Q9NX08 183 aa12.5□□□□□ -0.41
SYNE2-206ENST00000441438 CCDC163A0A0D9SF12 145 aa12.49□□□□□ -0.41
SYNE2-206ENST00000441438 HSP90AB1P08238 724 aaKnown RBP12.49□□□□□ -0.41
SYNE2-206ENST00000441438 DCTN1Q14203 1278 aa12.49□□□□□ -0.41
SYNE2-206ENST00000441438 ANKRD45Q5TZF3 282 aa12.49□□□□□ -0.41
SYNE2-206ENST00000441438 KLHL23Q8NBE8 558 aa12.49□□□□□ -0.41
SYNE2-206ENST00000441438 CENPOQ9BU64 300 aa12.49□□□□□ -0.41
SYNE2-206ENST00000441438 XPO4Q9C0E2 1151 aaKnown RBP12.49□□□□□ -0.41
SYNE2-206ENST00000441438 CAPN10Q9HC96 672 aa12.49□□□□□ -0.41
SYNE2-206ENST00000441438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
SYNE2-206ENST00000441438 A0A1W2PRQ8 180 aa12.49□□□□□ -0.41
SYNE2-206ENST00000441438 SOWAHDA6NJG2 315 aa12.49□□□□□ -0.41
SYNE2-206ENST00000441438 METTL16Q86W50 562 aaKnown RBP12.49□□□□□ -0.41
SYNE2-206ENST00000441438 TMEM131LA2VDJ0 1609 aa12.49□□□□□ -0.41
SYNE2-206ENST00000441438 CHL1O00533 1208 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 KIF3CO14782 793 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 XBP1P17861 261 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 DNAJA1P31689 397 aaKnown RBP12.48□□□□□ -0.41
SYNE2-206ENST00000441438 JAKMIP3Q5VZ66 844 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 SAMD14Q8IZD0 417 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-206ENST00000441438 DHX36Q9H2U1 1008 aaKnown RBP12.48□□□□□ -0.41
SYNE2-206ENST00000441438 RWDD1Q9H446 243 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-206ENST00000441438 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-206ENST00000441438 PODNQ7Z5L7 613 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 DNAJC25Q9H1X3 360 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 ARNT2Q9HBZ2 717 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 C11orf91Q3C1V1 193 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 JMYQ8N9B5 988 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 NEK9Q8TD19 979 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 PPP1R12CQ9BZL4 782 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 RABGAP1Q9Y3P9 1069 aa12.48□□□□□ -0.41
SYNE2-206ENST00000441438 KIF1BO60333 1816 aa12.47□□□□□ -0.41
SYNE2-206ENST00000441438 MLECQ14165 292 aa12.47□□□□□ -0.41
SYNE2-206ENST00000441438 BRD3Q15059 726 aa12.47□□□□□ -0.41
SYNE2-206ENST00000441438 ENPP1P22413 925 aa12.47□□□□□ -0.41
SYNE2-206ENST00000441438 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
SYNE2-206ENST00000441438 FBXO31Q5XUX0 539 aaPredicted RBP12.47□□□□□ -0.41
SYNE2-206ENST00000441438 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
SYNE2-206ENST00000441438 PRPF38AQ8NAV1 312 aaKnown RBP12.47□□□□□ -0.41
SYNE2-206ENST00000441438 HOXC10Q9NYD6 342 aa12.47□□□□□ -0.41
SYNE2-206ENST00000441438 ITM2BQ9Y287 266 aa12.47□□□□□ -0.41
SYNE2-206ENST00000441438 STRCQ7RTU9 1775 aa12.46□□□□□ -0.41
SYNE2-206ENST00000441438 IL4RP24394 825 aa12.46□□□□□ -0.41
SYNE2-206ENST00000441438 SERPINB4P48594 390 aa12.46□□□□□ -0.41
SYNE2-206ENST00000441438 SLC4A8Q2Y0W8 1093 aa12.46□□□□□ -0.41
SYNE2-206ENST00000441438 MYRIPQ8NFW9 859 aa12.46□□□□□ -0.41
SYNE2-206ENST00000441438 MAP3K14Q99558 947 aa12.46□□□□□ -0.41
SYNE2-206ENST00000441438 MRPS23Q9Y3D9 190 aaKnown RBP12.46□□□□□ -0.41
SYNE2-206ENST00000441438 SETBP1Q9Y6X0 1596 aa12.46□□□□□ -0.41
SYNE2-206ENST00000441438 SCAMP3O14828 347 aaKnown RBP12.46□□□□□ -0.41
SYNE2-206ENST00000441438 APPL2Q8NEU8 664 aa12.46□□□□□ -0.41
SYNE2-206ENST00000441438 IWS1Q96ST2 819 aa12.46□□□□□ -0.41
SYNE2-206ENST00000441438 REPIN1Q9BWE0 567 aaKnown RBP12.46□□□□□ -0.41
SYNE2-206ENST00000441438 TRMT1Q9NXH9 659 aaKnown RBP12.46□□□□□ -0.41
SYNE2-206ENST00000441438 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.42
SYNE2-206ENST00000441438 TMEM110-MUSTN1A8MSY1 372 aa12.46□□□□□ -0.42
SYNE2-206ENST00000441438 CDC27P30260 824 aa12.46□□□□□ -0.42
SYNE2-206ENST00000441438 STIP1P31948 543 aaKnown RBP12.46□□□□□ -0.42
SYNE2-206ENST00000441438 HDGFL2Q7Z4V5 671 aaPredicted RBP12.46□□□□□ -0.42
SYNE2-206ENST00000441438 TEX19Q8NA77 164 aa12.46□□□□□ -0.42
SYNE2-206ENST00000441438 CERKQ8TCT0 537 aa12.46□□□□□ -0.42
SYNE2-206ENST00000441438 ZFPM2Q8WW38 1151 aa12.46□□□□□ -0.42
SYNE2-206ENST00000441438 KIF15Q9NS87 1388 aa12.45□□□□□ -0.42
SYNE2-206ENST00000441438 LILRB3O75022 631 aa12.45□□□□□ -0.42
SYNE2-206ENST00000441438 TRIM37O94972 964 aa12.45□□□□□ -0.42
SYNE2-206ENST00000441438 GIGYF2Q6Y7W6 1299 aaKnown RBP12.45□□□□□ -0.42
SYNE2-206ENST00000441438 PAXBP1Q9Y5B6 917 aa12.45□□□□□ -0.42
SYNE2-206ENST00000441438 PLIN1O60240 522 aa12.45□□□□□ -0.42
SYNE2-206ENST00000441438 SPECC1Q5M775 1068 aa12.45□□□□□ -0.42
SYNE2-206ENST00000441438 FERMT3Q86UX7 667 aa12.45□□□□□ -0.42
SYNE2-206ENST00000441438 UHRF1BP1Q6BDS2 1440 aa12.45□□□□□ -0.42
SYNE2-206ENST00000441438 PPLO60437 1756 aa12.45□□□□□ -0.42
SYNE2-206ENST00000441438 C19orf81C9J6K1 198 aa12.44□□□□□ -0.42
SYNE2-206ENST00000441438 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
SYNE2-206ENST00000441438 MTMR14Q8NCE2 650 aa12.44□□□□□ -0.42
SYNE2-206ENST00000441438 IKBKGQ9Y6K9 419 aa12.44□□□□□ -0.42
SYNE2-206ENST00000441438 ANKRD50Q9ULJ7 1429 aa12.44□□□□□ -0.42
SYNE2-206ENST00000441438 NCOA3Q9Y6Q9 1424 aa12.44□□□□□ -0.42
SYNE2-206ENST00000441438 MINK1Q8N4C8 1332 aaPredicted RBP12.44□□□□□ -0.42
SYNE2-206ENST00000441438 ZSCAN20P17040 1043 aaPredicted RBP12.44□□□□□ -0.42
SYNE2-206ENST00000441438 GIMAP1Q8WWP7 306 aa12.44□□□□□ -0.42
SYNE2-206ENST00000441438 ARMC5Q96C12 935 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms