RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 NLRP5P59047 1200 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 ASXL1Q8IXJ9 1541 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 DNA2P51530 1060 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 MPNDQ8N594 471 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 TBC1D31Q96DN5 1066 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 RSPH14Q9UHP6 348 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 IL16Q14005 1332 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 CCDC114Q96M63 670 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 NKIRAS1Q9NYS0 192 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 PPP1R2P41236 205 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 LMNTD2Q8IXW0 634 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 AQRO60306 1485 aaKnown RBP eCLIP13.9□□□□□ -0.18
GFRA1-204ENST00000439649 IFIT3O14879 490 aaKnown RBP13.9□□□□□ -0.18
GFRA1-204ENST00000439649 MYO1BO43795 1136 aa13.9□□□□□ -0.18
GFRA1-204ENST00000439649 RPUSD2Q8IZ73 545 aaKnown RBP13.89□□□□□ -0.19
GFRA1-204ENST00000439649 TRMT1Q9NXH9 659 aaKnown RBP13.89□□□□□ -0.19
GFRA1-204ENST00000439649 MTUS1Q9ULD2 1270 aa13.89□□□□□ -0.19
GFRA1-204ENST00000439649 MAP1BP46821 2468 aaKnown RBP13.89□□□□□ -0.19
GFRA1-204ENST00000439649 GOLGA8AA7E2F4 631 aa13.89□□□□□ -0.19
GFRA1-204ENST00000439649 ZSCAN23Q3MJ62 389 aa13.89□□□□□ -0.19
GFRA1-204ENST00000439649 DHX37Q8IY37 1157 aaKnown RBP13.89□□□□□ -0.19
GFRA1-204ENST00000439649 CASQ2O14958 399 aaPredicted RBP13.89□□□□□ -0.19
GFRA1-204ENST00000439649 DBF4Q9UBU7 674 aaPredicted RBP13.89□□□□□ -0.19
GFRA1-204ENST00000439649 CLGNO14967 610 aa13.89□□□□□ -0.19
GFRA1-204ENST00000439649 VIMP08670 466 aaKnown RBP13.89□□□□□ -0.19
GFRA1-204ENST00000439649 RANBP6O60518 1105 aaKnown RBP13.89□□□□□ -0.19
GFRA1-204ENST00000439649 GIGYF1O75420 1035 aaPredicted RBP13.89□□□□□ -0.19
GFRA1-204ENST00000439649 BCAP29Q9UHQ4 241 aa13.89□□□□□ -0.19
GFRA1-204ENST00000439649 HMGXB3Q12766 1538 aa13.89□□□□□ -0.19
GFRA1-204ENST00000439649 PDE4DIPQ5VU43 2346 aa13.89□□□□□ -0.19
GFRA1-204ENST00000439649 TRIM14Q14142 442 aa13.89□□□□□ -0.19
GFRA1-204ENST00000439649 EXOC6BQ9Y2D4 811 aa13.89□□□□□ -0.19
GFRA1-204ENST00000439649 MINDY4BA8MYZ0 360 aa13.89□□□□□ -0.19
GFRA1-204ENST00000439649 TPD52P55327 224 aaPredicted RBP13.89□□□□□ -0.19
GFRA1-204ENST00000439649 SYT1P21579 422 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 ECHDC1Q9NTX5 307 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 PPFIA2O75334 1257 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 CALCOCO2Q13137 446 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 ACTN4O43707 911 aaKnown RBP13.88□□□□□ -0.19
GFRA1-204ENST00000439649 TAOK1Q7L7X3 1001 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 PRDM10Q9NQV6 1147 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 MYH9P35579 1960 aaKnown RBP13.88□□□□□ -0.19
GFRA1-204ENST00000439649 LDHCP07864 332 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 GSTA5Q7RTV2 222 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 VCX3AQ9NNX9 186 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 GJB2P29033 226 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 RASSF2P50749 326 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 NUTM2GQ5VZR2 741 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 CDC5LQ99459 802 aaKnown RBP13.88□□□□□ -0.19
GFRA1-204ENST00000439649 NUF2Q9BZD4 464 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 RTL9Q8NET4 1388 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 ARL1P40616 181 aaPredicted RBP13.88□□□□□ -0.19
GFRA1-204ENST00000439649 INF2Q27J81 1249 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 RGS22Q8NE09 1264 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 TEX13AQ9BXU3 409 aaPredicted RBP13.88□□□□□ -0.19
GFRA1-204ENST00000439649 PPM1FP49593 454 aaPredicted RBP13.88□□□□□ -0.19
GFRA1-204ENST00000439649 BICD1Q96G01 975 aa13.88□□□□□ -0.19
GFRA1-204ENST00000439649 RP1L1Q8IWN7 2480 aaPredicted RBP13.87□□□□□ -0.19
GFRA1-204ENST00000439649 RAD50Q92878 1312 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 NCBP1Q09161 790 aaKnown RBP13.87□□□□□ -0.19
GFRA1-204ENST00000439649 TMEM67Q5HYA8 995 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 NPHP3Q7Z494 1330 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 IRX4P78413 519 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 TAF7Q15545 349 aaPredicted RBP13.87□□□□□ -0.19
GFRA1-204ENST00000439649 DUSP27Q5VZP5 1158 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 KAT6AQ92794 2004 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 TRPC3Q13507 836 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 IQCDQ96DY2 449 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 TBC1D32Q96NH3 1257 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 MAP3K21Q5TCX8 1036 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 MRPS27Q92552 414 aaKnown RBP13.87□□□□□ -0.19
GFRA1-204ENST00000439649 CCDC42Q96M95 316 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 CCDC62Q6P9F0 684 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 CCDC26Q8TAB7 109 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 KAT14Q9H8E8 782 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 A0A1B0GUL7 405 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 ZSCAN22P10073 491 aaPredicted RBP13.87□□□□□ -0.19
GFRA1-204ENST00000439649 PAIP2Q9BPZ3 127 aaKnown RBP13.87□□□□□ -0.19
GFRA1-204ENST00000439649 TBC1D2Q9BYX2 928 aa13.87□□□□□ -0.19
GFRA1-204ENST00000439649 ATP6V0A2Q9Y487 856 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 CFAP43Q8NDM7 1665 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 IDEP14735 1019 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 SARNPP82979 210 aaKnown RBP13.86□□□□□ -0.19
GFRA1-204ENST00000439649 BRAPQ7Z569 592 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 ARAP1Q96P48 1450 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 RNF168Q8IYW5 571 aaPredicted RBP13.86□□□□□ -0.19
GFRA1-204ENST00000439649 PUF60Q9UHX1 559 aaKnown RBP13.86□□□□□ -0.19
GFRA1-204ENST00000439649 SAMM50Q9Y512 469 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 PUS7Q96PZ0 661 aaKnown RBP13.86□□□□□ -0.19
GFRA1-204ENST00000439649 NOLC1Q14978 699 aaKnown RBP eCLIP13.86□□□□□ -0.19
GFRA1-204ENST00000439649 INTS8Q75QN2 995 aaKnown RBP13.86□□□□□ -0.19
GFRA1-204ENST00000439649 ZKSCAN5Q9Y2L8 839 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 RTL1A6NKG5 1358 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 RUSC2Q8N2Y8 1516 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 VWA3BQ502W6 1294 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 RAB3IPQ96QF0 476 aaPredicted RBP13.86□□□□□ -0.19
GFRA1-204ENST00000439649 LIG1P18858 919 aa13.86□□□□□ -0.19
GFRA1-204ENST00000439649 CCDC144CPQ8IYA2 1237 aa13.85□□□□□ -0.19
GFRA1-204ENST00000439649 SRGAP1Q7Z6B7 1085 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms