RNA–Protein interactions for RNA: ENST00000437941.6

SSX2IP-203, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2 BASIC

Gene SSX2IP, Length 5,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-203ENST00000437941 TNNI2P48788 182 aa25.38■■□□□ 1.65
SSX2IP-203ENST00000437941 MRPL50Q8N5N7 158 aaKnown RBP25.38■■□□□ 1.65
SSX2IP-203ENST00000437941 CASQ1P31415 396 aa25.38■■□□□ 1.65
SSX2IP-203ENST00000437941 LDHBP07195 334 aaKnown RBP25.38■■□□□ 1.65
SSX2IP-203ENST00000437941 HDAC1Q13547 482 aaPredicted RBP25.38■■□□□ 1.65
SSX2IP-203ENST00000437941 RBM27Q9P2N5 1060 aaKnown RBP25.38■■□□□ 1.65
SSX2IP-203ENST00000437941 CALM1P0DP23 149 aa25.37■■□□□ 1.65
SSX2IP-203ENST00000437941 CALM2P0DP24 149 aa25.37■■□□□ 1.65
SSX2IP-203ENST00000437941 CALM3P0DP25 149 aa25.37■■□□□ 1.65
SSX2IP-203ENST00000437941 DNA2P51530 1060 aa25.37■■□□□ 1.65
SSX2IP-203ENST00000437941 C6orf50Q9HD87 102 aa25.37■■□□□ 1.65
SSX2IP-203ENST00000437941 MCM9Q9NXL9 1143 aa25.37■■□□□ 1.65
SSX2IP-203ENST00000437941 PDE1AP54750 535 aa25.37■■□□□ 1.65
SSX2IP-203ENST00000437941 RBM8AQ9Y5S9 174 aaKnown RBP25.37■■□□□ 1.65
SSX2IP-203ENST00000437941 TRAPPC8Q9Y2L5 1435 aa25.37■■□□□ 1.65
SSX2IP-203ENST00000437941 NUCB1Q02818 461 aa25.37■■□□□ 1.65
SSX2IP-203ENST00000437941 BRPF3Q9ULD4 1205 aa25.37■■□□□ 1.65
SSX2IP-203ENST00000437941 FERMT1Q9BQL6 677 aa25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 CA8P35219 290 aa25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 ALS2CR12Q96Q35 445 aa25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 EYA1Q99502 592 aa25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 RNMTO43148 476 aaKnown RBP25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 CCDC172P0C7W6 258 aa25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 TNNT1P13805 278 aa25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 HOXC9P31274 260 aa25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 CCNL1Q9UK58 526 aaPredicted RBP25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 SDSP20132 328 aa25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 CNBD1Q8NA66 436 aa25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 HELBQ8NG08 1087 aaPredicted RBP25.36■■□□□ 1.65
SSX2IP-203ENST00000437941 TRIM47Q96LD4 638 aa25.35■■□□□ 1.65
SSX2IP-203ENST00000437941 ABCC1P33527 1531 aa25.35■■□□□ 1.65
SSX2IP-203ENST00000437941 ITSN2Q9NZM3 1697 aa25.35■■□□□ 1.65
SSX2IP-203ENST00000437941 SPDYE3A6NKU9 549 aa25.35■■□□□ 1.65
SSX2IP-203ENST00000437941 MAP9Q49MG5 647 aa25.34■■□□□ 1.65
SSX2IP-203ENST00000437941 DYDC1Q8WWB3 177 aa25.34■■□□□ 1.65
SSX2IP-203ENST00000437941 PA2G4Q9UQ80 394 aaKnown RBP25.34■■□□□ 1.65
SSX2IP-203ENST00000437941 TMCO5BA8MYB1 307 aa25.34■■□□□ 1.65
SSX2IP-203ENST00000437941 STAT6P42226 847 aa25.34■■□□□ 1.65
SSX2IP-203ENST00000437941 RRP36Q96EU6 259 aaKnown RBP25.34■■□□□ 1.65
SSX2IP-203ENST00000437941 MCM3P25205 808 aa25.34■■□□□ 1.65
SSX2IP-203ENST00000437941 TBC1D2Q9BYX2 928 aa25.34■■□□□ 1.65
SSX2IP-203ENST00000437941 CCDC113Q9H0I3 377 aa25.34■■□□□ 1.65
SSX2IP-203ENST00000437941 RTL9Q8NET4 1388 aa25.33■■□□□ 1.65
SSX2IP-203ENST00000437941 LRRC2Q9BYS8 371 aa25.33■■□□□ 1.65
SSX2IP-203ENST00000437941 TAOK3Q9H2K8 898 aa25.33■■□□□ 1.65
SSX2IP-203ENST00000437941 RNF113AO15541 343 aaKnown RBP25.33■■□□□ 1.65
SSX2IP-203ENST00000437941 KIF18AQ8NI77 898 aa25.33■■□□□ 1.65
SSX2IP-203ENST00000437941 PHACTR2O75167 634 aa25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 KRT13P13646 458 aa25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 NCBP1Q09161 790 aaKnown RBP25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 SKAP1Q86WV1 359 aa25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 URI1O94763 535 aaPredicted RBP25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 SYKP43405 635 aa25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 MAGEB6Q8N7X4 407 aa25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 GDPD2Q9HCC8 539 aa25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 GSDMDP57764 484 aa25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 CWF19L2Q2TBE0 894 aaKnown RBP25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 TNPO1Q92973 898 aaKnown RBP25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 GOPCQ9HD26 462 aa25.32■■□□□ 1.64
SSX2IP-203ENST00000437941 UHRF1BP1Q6BDS2 1440 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 NOP2P46087 812 aaKnown RBP25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 PARP10Q53GL7 1025 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 MMRN2Q9H8L6 949 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 TTC41PQ6P2S7 1318 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 CALML3P27482 149 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 NEMFO60524 1076 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 IFFO1Q0D2I5 559 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 MAP3K9P80192 1104 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 TTC6Q86TZ1 520 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 MIGA1Q8NAN2 632 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 RBM10P98175 930 aaKnown RBP25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 NECAB1Q8N987 351 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 TBC1D5Q92609 795 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 COMMD10Q9Y6G5 202 aa25.31■■□□□ 1.64
SSX2IP-203ENST00000437941 NUP153P49790 1475 aaKnown RBP25.3■■□□□ 1.64
SSX2IP-203ENST00000437941 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
SSX2IP-203ENST00000437941 Q6ZUG5 572 aa25.3■■□□□ 1.64
SSX2IP-203ENST00000437941 KCNG4Q8TDN1 519 aa25.3■■□□□ 1.64
SSX2IP-203ENST00000437941 ESYT1Q9BSJ8 1104 aa25.3■■□□□ 1.64
SSX2IP-203ENST00000437941 RRAGBQ5VZM2 374 aa25.3■■□□□ 1.64
SSX2IP-203ENST00000437941 SYNCQ9H7C4 482 aa25.3■■□□□ 1.64
SSX2IP-203ENST00000437941 IGHDP01880 384 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 TMC6Q7Z403 805 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 TCHPQ9BT92 498 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 NAA15Q9BXJ9 866 aaKnown RBP25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 SH2D4AQ9H788 454 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 DENND2AQ9ULE3 1009 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 ZFYVE9O95405 1425 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 UBE2HP62256 183 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 SOS1Q07889 1333 aaPredicted RBP25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 CAVIN2O95810 425 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 TMCO3Q6UWJ1 677 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 GJA3Q9Y6H8 435 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 UQCRHLA0A096LP55 91 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 ESPNB1AK53 854 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 UQCRHP07919 91 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 NMIQ13287 307 aaPredicted RBP25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 PRAG1Q86YV5 1406 aa25.29■■□□□ 1.64
SSX2IP-203ENST00000437941 YTHDC2Q9H6S0 1430 aaKnown RBP25.28■■□□□ 1.64
SSX2IP-203ENST00000437941 N4BP3O15049 544 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms