RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 ERLIN2O94905 339 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 ZNF132P52740 706 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 SCRN1Q12765 414 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 EIF2B5Q13144 721 aaKnown RBP7.5□□□□□ -1.21
MCF2-205ENST00000437564 WLSQ5T9L3 541 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 CDCA2Q69YH5 1023 aaPredicted RBP7.5□□□□□ -1.21
MCF2-205ENST00000437564 CCDC82Q8N4S0 544 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 ARL10Q8N8L6 244 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 TRIML1Q8N9V2 468 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 C1orf131Q8NDD1 294 aaKnown RBP7.5□□□□□ -1.21
MCF2-205ENST00000437564 SMARCE1Q969G3 411 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 NACC2Q96BF6 587 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 DUSP9Q99956 384 aaKnown RBP7.5□□□□□ -1.21
MCF2-205ENST00000437564 TSGA10Q9BZW7 698 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 ARGLU1Q9NWB6 273 aaPredicted RBP7.5□□□□□ -1.21
MCF2-205ENST00000437564 TBC1D7Q9P0N9 293 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 WWC3Q9ULE0 1092 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 FHOD1Q9Y613 1164 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 EIF3AQ14152 1382 aaKnown RBP7.5□□□□□ -1.21
MCF2-205ENST00000437564 PLEKHH1Q9ULM0 1364 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 EME2A4GXA9 379 aaPredicted RBP7.5□□□□□ -1.21
MCF2-205ENST00000437564 FESP07332 822 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 PTK7Q13308 1070 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 MPP3Q13368 585 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 PARP10Q53GL7 1025 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 ARHGAP22Q7Z5H3 698 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 SPATS2Q86XZ4 545 aaKnown RBP7.5□□□□□ -1.21
MCF2-205ENST00000437564 PEX5LQ8IYB4 626 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 PARD3BQ8TEW8 1205 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 FBXW7Q969H0 707 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 UIMC1Q96RL1 719 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 KIF9Q9HAQ2 790 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 N6AMT1Q9Y5N5 214 aa7.5□□□□□ -1.21
MCF2-205ENST00000437564 BRD4O60885 1362 aaPredicted RBP7.49□□□□□ -1.21
MCF2-205ENST00000437564 DPYSL4O14531 572 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 H2AFXP16104 143 aaPredicted RBP7.49□□□□□ -1.21
MCF2-205ENST00000437564 TRIM21P19474 475 aaKnown RBP7.49□□□□□ -1.21
MCF2-205ENST00000437564 PSMD7P51665 324 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 NSUN2Q08J23 767 aaKnown RBP eCLIP7.49□□□□□ -1.21
MCF2-205ENST00000437564 PPP1R15BQ5SWA1 713 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 FAAH2Q6GMR7 532 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 TMEM110Q86TL2 294 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 LMNTD2Q8IXW0 634 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 AFAP1Q8N556 730 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 DDX12PQ92771 950 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 CCDC114Q96M63 670 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 OSBPL9Q96SU4 736 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 JPH2Q9BR39 696 aaPredicted RBP7.49□□□□□ -1.21
MCF2-205ENST00000437564 EMILIN3Q9NT22 766 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 TUBA8Q9NY65 449 aaPredicted RBP7.49□□□□□ -1.21
MCF2-205ENST00000437564 ATP6V0A2Q9Y487 856 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 EVC2Q86UK5 1308 aa7.49□□□□□ -1.21
MCF2-205ENST00000437564 TRIM64CA6NLI5 447 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 ONECUT3O60422 494 aaPredicted RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 VIL1P09327 827 aaKnown RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 PNMA6AP0CW24 399 aaPredicted RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 EIF4BP23588 611 aaKnown RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 RANBP1P43487 201 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 PLA2G4AP47712 749 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 PRIM1P49642 420 aaKnown RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 FOSBP53539 338 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 FLIIQ13045 1269 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 MMRN1Q13201 1228 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 PABPC4Q13310 644 aaKnown RBP eCLIP7.48□□□□□ -1.21
MCF2-205ENST00000437564 PDIA6Q15084 440 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 FXNQ16595 210 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 KIF4BQ2VIQ3 1234 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 LRRC23Q53EV4 343 aaPredicted RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 FBXO38Q6PIJ6 1188 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 LCA5Q86VQ0 697 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 MAB21L3Q8N8X9 362 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 SMYD1Q8NB12 490 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 ANKRD24Q8TF21 1146 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 PMM1Q92871 262 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 KCNN1Q92952 543 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 CDK5RAP3Q96JB5 506 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 MPP4Q96JB8 637 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 CABS1Q96KC9 395 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 RUFY1Q96T51 708 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 ANKIB1Q9P2G1 1089 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 AMOTL2Q9Y2J4 779 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 YEATS2Q9ULM3 1422 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 MTRF1O75570 445 aaKnown RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 RPL17P18621 184 aaKnown RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 SNX1Q13596 522 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 ARMC3Q5W041 872 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 PACS1Q6VY07 963 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 CCDC170Q8IYT3 715 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 RNF168Q8IYW5 571 aaPredicted RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 GBP7Q8N8V2 638 aaPredicted RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 CCDC150Q8NCX0 1101 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 USP33Q8TEY7 942 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 ARHGAP45Q92619 1136 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 DHTKD1Q96HY7 919 aaPredicted RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 SH3GL1Q99961 368 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 LUC7LQ9NQ29 371 aaKnown RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 GPHNQ9NQX3 736 aaPredicted RBP7.48□□□□□ -1.21
MCF2-205ENST00000437564 ST7Q9NRC1 585 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 IKBKGQ9Y6K9 419 aa7.48□□□□□ -1.21
MCF2-205ENST00000437564 MINK1Q8N4C8 1332 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms