RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 Q6ZUG5 572 aa12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 C17orf53Q8N3J3 647 aaPredicted RBP12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 ZBTB3Q9H5J0 574 aa12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 HMG20BQ9P0W2 317 aa12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
CLSTN1-203ENST00000435891 GOLIM4O00461 696 aa12.34□□□□□ -0.43
CLSTN1-203ENST00000435891 PPFIA3O75145 1194 aa12.34□□□□□ -0.43
CLSTN1-203ENST00000435891 H7C1W4 665 aa12.34□□□□□ -0.43
CLSTN1-203ENST00000435891 KRT85P78386 507 aa12.34□□□□□ -0.43
CLSTN1-203ENST00000435891 ANKRD1Q15327 319 aa12.34□□□□□ -0.43
CLSTN1-203ENST00000435891 MTERF4Q7Z6M4 381 aaKnown RBP12.34□□□□□ -0.43
CLSTN1-203ENST00000435891 SPATA31A3Q5VYP0 1347 aa12.34□□□□□ -0.43
CLSTN1-203ENST00000435891 UVSSAQ2YD98 709 aa12.34□□□□□ -0.43
CLSTN1-203ENST00000435891 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
CLSTN1-203ENST00000435891 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
CLSTN1-203ENST00000435891 GTF3C6Q969F1 213 aa12.33□□□□□ -0.44
CLSTN1-203ENST00000435891 KDM4AO75164 1064 aa12.33□□□□□ -0.44
CLSTN1-203ENST00000435891 LETM1O95202 739 aaPredicted RBP12.33□□□□□ -0.44
CLSTN1-203ENST00000435891 MCM5P33992 734 aa12.33□□□□□ -0.44
CLSTN1-203ENST00000435891 KBTBD3Q8NAB2 608 aa12.33□□□□□ -0.44
CLSTN1-203ENST00000435891 BRF1Q92994 677 aa12.33□□□□□ -0.44
CLSTN1-203ENST00000435891 PUS3Q9BZE2 481 aaKnown RBP12.33□□□□□ -0.44
CLSTN1-203ENST00000435891 PKD1L3Q7Z443 1732 aa12.33□□□□□ -0.44
CLSTN1-203ENST00000435891 CSPP1Q1MSJ5 1256 aa12.32□□□□□ -0.44
CLSTN1-203ENST00000435891 CKAP2LQ8IYA6 745 aa12.32□□□□□ -0.44
CLSTN1-203ENST00000435891 PDCP20941 246 aa12.32□□□□□ -0.44
CLSTN1-203ENST00000435891 FOSBP53539 338 aa12.32□□□□□ -0.44
CLSTN1-203ENST00000435891 SCRN1Q12765 414 aa12.32□□□□□ -0.44
CLSTN1-203ENST00000435891 LEO1Q8WVC0 666 aaPredicted RBP12.32□□□□□ -0.44
CLSTN1-203ENST00000435891 DACT1Q9NYF0 836 aa12.32□□□□□ -0.44
CLSTN1-203ENST00000435891 CGNQ9P2M7 1197 aaKnown RBP12.32□□□□□ -0.44
CLSTN1-203ENST00000435891 HSP90B1P14625 803 aaKnown RBP12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 TAF7LQ5H9L4 462 aa12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 PGBD1Q96JS3 809 aa12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 PAG1Q9NWQ8 432 aa12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 CWC25Q9NXE8 425 aaPredicted RBP12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 TOM1L2Q6ZVM7 507 aa12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 CHST3Q7LGC8 479 aa12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 SPATA32Q96LK8 384 aa12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 CCDC85AQ96PX6 553 aaPredicted RBP12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 U3KPZ7 1027 aaPredicted RBP12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 KRT32Q14532 448 aa12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 ZCRB1Q8TBF4 217 aaKnown RBP12.31□□□□□ -0.44
CLSTN1-203ENST00000435891 ELP1O95163 1332 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 CADPS2Q86UW7 1296 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 FTOQ9C0B1 505 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 HSPA2P54652 639 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 NUP62CLQ9H1M0 184 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 PRDM11Q9NQV5 511 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 MRVI1Q9Y6F6 885 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 NR1I2O75469 434 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 APOBRQ0VD83 1088 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 KIAA2012Q0VF49 1180 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 RESTQ13127 1097 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 TTLL5Q6EMB2 1281 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 ZNF771Q7L3S4 317 aaPredicted RBP12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 ZNF330Q9Y3S2 320 aaPredicted RBP12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 ABCC6O95255 1503 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 CPDO75976 1380 aa12.3□□□□□ -0.44
CLSTN1-203ENST00000435891 SH3TC1Q8TE82 1336 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 A0A1B0GUL7 405 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 CTDNEP1O95476 244 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 CEBPZQ03701 1054 aaKnown RBP12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 LUZP1Q86V48 1076 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 TSC1Q92574 1164 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 NCOA5Q9HCD5 579 aaKnown RBP12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 CCT2P78371 535 aaKnown RBP12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 DMTNQ08495 405 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 SPC24Q8NBT2 197 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 TJP1Q07157 1748 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 LAMB4A4D0S4 1761 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 EYA2O00167 538 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 CCDC192P0DO97 292 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 HSPD1P10809 573 aaKnown RBP12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 TYRO3Q06418 890 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 MAP3K11Q16584 847 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 BRINP3Q76B58 766 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 RFX7Q2KHR2 1363 aa12.29□□□□□ -0.44
CLSTN1-203ENST00000435891 MAST3O60307 1309 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 SCAND2PQ9GZW5 306 aaPredicted RBP12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 PALLDQ8WX93 1383 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 KCPQ6ZWJ8 1503 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 PCDH11XQ9BZA7 1347 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 PCDH11YQ9BZA8 1340 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 M0R2C6 588 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 ADORA1P30542 326 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 IL15P40933 162 aaPredicted RBP12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 ZMYM1Q5SVZ6 1142 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 NSUN7Q8NE18 718 aaKnown RBP12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 KCNF1Q9H3M0 494 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 LAMA4Q16363 1823 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 IFIT1P09914 478 aaKnown RBP12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 SYNE4Q8N205 404 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 TNMDQ9H2S6 317 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 DCCP43146 1447 aa12.28□□□□□ -0.44
CLSTN1-203ENST00000435891 DYNC1I1O14576 645 aa12.27□□□□□ -0.44
CLSTN1-203ENST00000435891 HSP90AB3PQ58FF7 597 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms