RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 KLK14Q9P0G3 267 aa10.73□□□□□ -0.69
PTPRK-212ENST00000434424 ATP4AP20648 1035 aa10.72□□□□□ -0.69
PTPRK-212ENST00000434424 PLA2G4AP47712 749 aa10.72□□□□□ -0.69
PTPRK-212ENST00000434424 ZDHHC1Q8WTX9 485 aa10.72□□□□□ -0.69
PTPRK-212ENST00000434424 L3MBTL2Q969R5 705 aa10.72□□□□□ -0.69
PTPRK-212ENST00000434424 CRELD1Q96HD1 420 aa10.72□□□□□ -0.69
PTPRK-212ENST00000434424 DNAJC2Q99543 621 aaKnown RBP10.72□□□□□ -0.69
PTPRK-212ENST00000434424 SPG7Q9UQ90 795 aa10.72□□□□□ -0.69
PTPRK-212ENST00000434424 PHACTR1Q9C0D0 580 aa10.71□□□□□ -0.69
PTPRK-212ENST00000434424 ZCCHC6Q5VYS8 1495 aaKnown RBP10.7□□□□□ -0.7
PTPRK-212ENST00000434424 EIF1AYO14602 144 aaKnown RBP10.7□□□□□ -0.7
PTPRK-212ENST00000434424 BAG6P46379 1132 aa10.7□□□□□ -0.7
PTPRK-212ENST00000434424 ORC1Q13415 861 aa10.7□□□□□ -0.7
PTPRK-212ENST00000434424 ZNF295-AS1Q8N0V1 137 aa10.7□□□□□ -0.7
PTPRK-212ENST00000434424 DHX38Q92620 1227 aaKnown RBP10.7□□□□□ -0.7
PTPRK-212ENST00000434424 ZCCHC2Q9C0B9 1178 aaKnown RBP10.7□□□□□ -0.7
PTPRK-212ENST00000434424 DNAJC25Q9H1X3 360 aa10.7□□□□□ -0.7
PTPRK-212ENST00000434424 FAM13BQ9NYF5 915 aa10.7□□□□□ -0.7
PTPRK-212ENST00000434424 PPM1GO15355 546 aaPredicted RBP10.69□□□□□ -0.7
PTPRK-212ENST00000434424 RPLP1P05386 114 aaKnown RBP10.69□□□□□ -0.7
PTPRK-212ENST00000434424 EPXP11678 715 aa10.69□□□□□ -0.7
PTPRK-212ENST00000434424 GTF2F1P35269 517 aaKnown RBP eCLIP10.69□□□□□ -0.7
PTPRK-212ENST00000434424 TNNI2P48788 182 aa10.69□□□□□ -0.7
PTPRK-212ENST00000434424 C8orf34Q49A92 452 aa10.69□□□□□ -0.7
PTPRK-212ENST00000434424 TREML1Q86YW5 311 aa10.69□□□□□ -0.7
PTPRK-212ENST00000434424 GPR152Q8TDT2 470 aa10.69□□□□□ -0.7
PTPRK-212ENST00000434424 ARMC5Q96C12 935 aa10.69□□□□□ -0.7
PTPRK-212ENST00000434424 NUDT16Q96DE0 195 aaKnown RBP10.69□□□□□ -0.7
PTPRK-212ENST00000434424 BTBD6Q96KE9 485 aa10.69□□□□□ -0.7
PTPRK-212ENST00000434424 PARP3Q9Y6F1 533 aa10.69□□□□□ -0.7
PTPRK-212ENST00000434424 CTSHP09668 335 aa10.68□□□□□ -0.7
PTPRK-212ENST00000434424 EIF4BP23588 611 aaKnown RBP10.68□□□□□ -0.7
PTPRK-212ENST00000434424 DNAJA1P31689 397 aaKnown RBP10.68□□□□□ -0.7
PTPRK-212ENST00000434424 GIMAP6Q6P9H5 292 aa10.68□□□□□ -0.7
PTPRK-212ENST00000434424 NOP9Q86U38 636 aaKnown RBP10.68□□□□□ -0.7
PTPRK-212ENST00000434424 ALYREFQ86V81 257 aaKnown RBP10.68□□□□□ -0.7
PTPRK-212ENST00000434424 GMLQ99445 158 aa10.68□□□□□ -0.7
PTPRK-212ENST00000434424 LNPKQ9C0E8 428 aa10.68□□□□□ -0.7
PTPRK-212ENST00000434424 K7ELQ4 463 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-212ENST00000434424 ARAFP10398 606 aa10.67□□□□□ -0.7
PTPRK-212ENST00000434424 GRIN2CQ14957 1233 aa10.67□□□□□ -0.7
PTPRK-212ENST00000434424 C1orf53Q5VUE5 145 aa10.67□□□□□ -0.7
PTPRK-212ENST00000434424 ZNF654Q8IZM8 581 aa10.67□□□□□ -0.7
PTPRK-212ENST00000434424 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
PTPRK-212ENST00000434424 KLF15Q9UIH9 416 aa10.67□□□□□ -0.7
PTPRK-212ENST00000434424 INPP5FQ9Y2H2 1132 aa10.67□□□□□ -0.7
PTPRK-212ENST00000434424 PCDHGC4Q9Y5F7 938 aa10.67□□□□□ -0.7
PTPRK-212ENST00000434424 CPNE3O75131 537 aaKnown RBP10.66□□□□□ -0.7
PTPRK-212ENST00000434424 NCLP19338 710 aaKnown RBP10.66□□□□□ -0.7
PTPRK-212ENST00000434424 AMPD1P23109 780 aa10.66□□□□□ -0.7
PTPRK-212ENST00000434424 DGKGP49619 791 aa10.66□□□□□ -0.7
PTPRK-212ENST00000434424 ARID5AQ03989 594 aa10.66□□□□□ -0.7
PTPRK-212ENST00000434424 GGNBP2Q9H3C7 697 aa10.66□□□□□ -0.7
PTPRK-212ENST00000434424 DDX41Q9UJV9 622 aaKnown RBP10.66□□□□□ -0.7
PTPRK-212ENST00000434424 NEURL1BA8MQ27 555 aa10.65□□□□□ -0.7
PTPRK-212ENST00000434424 FIGNL1Q6PIW4 674 aa10.65□□□□□ -0.7
PTPRK-212ENST00000434424 NLRP8Q86W28 1048 aa10.65□□□□□ -0.7
PTPRK-212ENST00000434424 FURINP09958 794 aa10.64□□□□□ -0.71
PTPRK-212ENST00000434424 USP48Q86UV5 1035 aa10.64□□□□□ -0.71
PTPRK-212ENST00000434424 GNB5O14775 395 aa10.63□□□□□ -0.71
PTPRK-212ENST00000434424 OPLAHO14841 1288 aa10.63□□□□□ -0.71
PTPRK-212ENST00000434424 GIPC1O14908 333 aa10.63□□□□□ -0.71
PTPRK-212ENST00000434424 ATXN7O15265 892 aaPredicted RBP10.63□□□□□ -0.71
PTPRK-212ENST00000434424 TNP2Q05952 138 aa10.63□□□□□ -0.71
PTPRK-212ENST00000434424 ZNF394Q53GI3 561 aa10.63□□□□□ -0.71
PTPRK-212ENST00000434424 HS2ST1Q7LGA3 356 aa10.63□□□□□ -0.71
PTPRK-212ENST00000434424 VPS37DQ86XT2 251 aa10.63□□□□□ -0.71
PTPRK-212ENST00000434424 AIDAQ96BJ3 306 aa10.63□□□□□ -0.71
PTPRK-212ENST00000434424 A0A1W2PNR3 127 aa10.62□□□□□ -0.71
PTPRK-212ENST00000434424 DCDC2BA2VCK2 349 aa10.62□□□□□ -0.71
PTPRK-212ENST00000434424 A6NHS1 94 aa10.62□□□□□ -0.71
PTPRK-212ENST00000434424 C1QTNF9BB2RNN3 333 aa10.62□□□□□ -0.71
PTPRK-212ENST00000434424 MICAL2O94851 1124 aa10.62□□□□□ -0.71
PTPRK-212ENST00000434424 MAPTP10636 758 aaKnown RBP10.62□□□□□ -0.71
PTPRK-212ENST00000434424 CD33P20138 364 aa10.62□□□□□ -0.71
PTPRK-212ENST00000434424 RACK1P63244 317 aaKnown RBP10.62□□□□□ -0.71
PTPRK-212ENST00000434424 PTPN12Q05209 780 aaKnown RBP10.62□□□□□ -0.71
PTPRK-212ENST00000434424 HIF1AQ16665 826 aa10.62□□□□□ -0.71
PTPRK-212ENST00000434424 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.62□□□□□ -0.71
PTPRK-212ENST00000434424 CD163Q86VB7 1156 aa10.62□□□□□ -0.71
PTPRK-212ENST00000434424 C12orf49Q9H741 205 aa10.62□□□□□ -0.71
PTPRK-212ENST00000434424 PCDHGB7Q9Y5F8 929 aa10.62□□□□□ -0.71
PTPRK-212ENST00000434424 CHSY3Q70JA7 882 aa10.61□□□□□ -0.71
PTPRK-212ENST00000434424 FCHSD1Q86WN1 690 aa10.61□□□□□ -0.71
PTPRK-212ENST00000434424 TMA7Q9Y2S6 64 aaKnown RBP10.61□□□□□ -0.71
PTPRK-212ENST00000434424 CCDC144BQ3MJ40 725 aa10.6□□□□□ -0.71
PTPRK-212ENST00000434424 FAM182BQ5T319 152 aa10.6□□□□□ -0.71
PTPRK-212ENST00000434424 SOGA3Q5TF21 947 aa10.6□□□□□ -0.71
PTPRK-212ENST00000434424 RHPN1Q8TCX5 695 aa10.6□□□□□ -0.71
PTPRK-212ENST00000434424 GGT7Q9UJ14 662 aa10.6□□□□□ -0.71
PTPRK-212ENST00000434424 BCS1LQ9Y276 419 aa10.6□□□□□ -0.71
PTPRK-212ENST00000434424 TXLNAP40222 546 aa10.59□□□□□ -0.71
PTPRK-212ENST00000434424 CHRNA4P43681 627 aa10.59□□□□□ -0.71
PTPRK-212ENST00000434424 RBL2Q08999 1139 aa10.59□□□□□ -0.71
PTPRK-212ENST00000434424 PMFBP1Q8TBY8 1022 aa10.59□□□□□ -0.71
PTPRK-212ENST00000434424 ZIC5Q96T25 663 aa10.59□□□□□ -0.71
PTPRK-212ENST00000434424 SRA1Q9HD15 236 aaKnown RBP10.59□□□□□ -0.71
PTPRK-212ENST00000434424 USP31Q70CQ4 1352 aa10.59□□□□□ -0.71
PTPRK-212ENST00000434424 ANKRD62A6NC57 917 aa10.58□□□□□ -0.72
PTPRK-212ENST00000434424 TGFBR3LH3BV60 316 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms