RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 TNS3Q68CZ2 1445 aa18.47■□□□□ 0.55
SCARF1-203ENST00000434376 HEG1Q9ULI3 1381 aa18.46■□□□□ 0.55
SCARF1-203ENST00000434376 ST3GAL1Q11201 340 aa18.46■□□□□ 0.55
SCARF1-203ENST00000434376 BICD2Q8TD16 824 aa18.46■□□□□ 0.55
SCARF1-203ENST00000434376 COPRSQ9NQ92 184 aa18.46■□□□□ 0.55
SCARF1-203ENST00000434376 ZHX1Q9UKY1 873 aaPredicted RBP18.46■□□□□ 0.55
SCARF1-203ENST00000434376 JAG2Q9Y219 1238 aa18.46■□□□□ 0.55
SCARF1-203ENST00000434376 AOX1Q06278 1338 aa18.46■□□□□ 0.55
SCARF1-203ENST00000434376 ZAP70P43403 619 aa18.46■□□□□ 0.55
SCARF1-203ENST00000434376 LRP10Q7Z4F1 713 aa18.46■□□□□ 0.55
SCARF1-203ENST00000434376 INCENPQ9NQS7 918 aa18.46■□□□□ 0.55
SCARF1-203ENST00000434376 PSMA5P28066 241 aa18.46■□□□□ 0.55
SCARF1-203ENST00000434376 DENND2AQ9ULE3 1009 aa18.46■□□□□ 0.55
SCARF1-203ENST00000434376 EXOC5O00471 708 aa18.45■□□□□ 0.54
SCARF1-203ENST00000434376 C17orf53Q8N3J3 647 aaPredicted RBP18.45■□□□□ 0.54
SCARF1-203ENST00000434376 EYA2O00167 538 aa18.45■□□□□ 0.54
SCARF1-203ENST00000434376 RRP12Q5JTH9 1297 aaKnown RBP18.45■□□□□ 0.54
SCARF1-203ENST00000434376 ATG9AQ7Z3C6 839 aa18.45■□□□□ 0.54
SCARF1-203ENST00000434376 MCMDC2Q4G0Z9 681 aa18.44■□□□□ 0.54
SCARF1-203ENST00000434376 TSPY26PQ9H489 355 aa18.44■□□□□ 0.54
SCARF1-203ENST00000434376 ZSWIM6Q9HCJ5 1215 aa18.44■□□□□ 0.54
SCARF1-203ENST00000434376 MTMR6Q9Y217 621 aa18.44■□□□□ 0.54
SCARF1-203ENST00000434376 MED1Q15648 1581 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-203ENST00000434376 STARD3NLO95772 234 aa18.44■□□□□ 0.54
SCARF1-203ENST00000434376 XAGE2Q96GT9 111 aa18.44■□□□□ 0.54
SCARF1-203ENST00000434376 NPHP1O15259 732 aa18.44■□□□□ 0.54
SCARF1-203ENST00000434376 CCDC158Q5M9N0 1113 aa18.44■□□□□ 0.54
SCARF1-203ENST00000434376 INTS4Q96HW7 963 aaKnown RBP18.43■□□□□ 0.54
SCARF1-203ENST00000434376 FAM208AQ9UK61 1670 aaKnown RBP18.43■□□□□ 0.54
SCARF1-203ENST00000434376 ATP5JP18859 108 aa18.43■□□□□ 0.54
SCARF1-203ENST00000434376 ITGA6P23229 1130 aa18.43■□□□□ 0.54
SCARF1-203ENST00000434376 STOX1Q6ZVD7 989 aa18.43■□□□□ 0.54
SCARF1-203ENST00000434376 ATG3Q9NT62 314 aa18.43■□□□□ 0.54
SCARF1-203ENST00000434376 RPS6KB1P23443 525 aa18.43■□□□□ 0.54
SCARF1-203ENST00000434376 GTF2E1P29083 439 aaPredicted RBP18.43■□□□□ 0.54
SCARF1-203ENST00000434376 NOL7Q9UMY1 257 aaKnown RBP18.43■□□□□ 0.54
SCARF1-203ENST00000434376 RPAP1Q9BWH6 1393 aaPredicted RBP18.42■□□□□ 0.54
SCARF1-203ENST00000434376 A0A0U1RQG5 324 aaPredicted RBP18.42■□□□□ 0.54
SCARF1-203ENST00000434376 HIP1O00291 1037 aa18.42■□□□□ 0.54
SCARF1-203ENST00000434376 MBD3O95983 291 aa18.42■□□□□ 0.54
SCARF1-203ENST00000434376 LRSAM1Q6UWE0 723 aa18.42■□□□□ 0.54
SCARF1-203ENST00000434376 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.42■□□□□ 0.54
SCARF1-203ENST00000434376 ZKSCAN5Q9Y2L8 839 aa18.42■□□□□ 0.54
SCARF1-203ENST00000434376 COL15A1P39059 1388 aa18.42■□□□□ 0.54
SCARF1-203ENST00000434376 KDM4FA0A1W2PPD8 638 aa18.42■□□□□ 0.54
SCARF1-203ENST00000434376 TOB2Q14106 344 aaPredicted RBP18.42■□□□□ 0.54
SCARF1-203ENST00000434376 WTIPA6NIX2 430 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-203ENST00000434376 IRS4O14654 1257 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-203ENST00000434376 ZNF445P59923 1031 aa18.41■□□□□ 0.54
SCARF1-203ENST00000434376 OSBP2Q969R2 916 aa18.41■□□□□ 0.54
SCARF1-203ENST00000434376 H7C1W4 665 aa18.41■□□□□ 0.54
SCARF1-203ENST00000434376 M0R2C6 588 aa18.41■□□□□ 0.54
SCARF1-203ENST00000434376 POLR3DP05423 398 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-203ENST00000434376 DZIP3Q86Y13 1208 aaKnown RBP18.41■□□□□ 0.54
SCARF1-203ENST00000434376 KBTBD3Q8NAB2 608 aa18.41■□□□□ 0.54
SCARF1-203ENST00000434376 SEC31BQ9NQW1 1179 aa18.41■□□□□ 0.54
SCARF1-203ENST00000434376 TCIRG1Q13488 830 aa18.41■□□□□ 0.54
SCARF1-203ENST00000434376 CARD10Q9BWT7 1032 aa18.41■□□□□ 0.54
SCARF1-203ENST00000434376 DNAJC5Q9H3Z4 198 aa18.41■□□□□ 0.54
SCARF1-203ENST00000434376 MARF1Q9Y4F3 1742 aaKnown RBP18.41■□□□□ 0.54
SCARF1-203ENST00000434376 KCNQ2O43526 872 aa18.4■□□□□ 0.54
SCARF1-203ENST00000434376 LIG1P18858 919 aa18.4■□□□□ 0.54
SCARF1-203ENST00000434376 SYAP1Q96A49 352 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-203ENST00000434376 IL15P40933 162 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-203ENST00000434376 SLC4A9Q96Q91 983 aa18.4■□□□□ 0.54
SCARF1-203ENST00000434376 CCDC39Q9UFE4 941 aa18.4■□□□□ 0.54
SCARF1-203ENST00000434376 TCHHQ07283 1943 aa18.4■□□□□ 0.54
SCARF1-203ENST00000434376 ATP6V1AP38606 617 aa18.39■□□□□ 0.54
SCARF1-203ENST00000434376 ATP2B3Q16720 1220 aa18.39■□□□□ 0.54
SCARF1-203ENST00000434376 TTC6Q86TZ1 520 aa18.39■□□□□ 0.54
SCARF1-203ENST00000434376 SPATA32Q96LK8 384 aa18.39■□□□□ 0.54
SCARF1-203ENST00000434376 MYL10Q9BUA6 226 aa18.39■□□□□ 0.54
SCARF1-203ENST00000434376 ABCF2Q9UG63 623 aa18.39■□□□□ 0.54
SCARF1-203ENST00000434376 UTRNP46939 3433 aa18.39■□□□□ 0.54
SCARF1-203ENST00000434376 ATP2B1P20020 1258 aa18.39■□□□□ 0.53
SCARF1-203ENST00000434376 PUS7LQ9H0K6 701 aaKnown RBP18.39■□□□□ 0.53
SCARF1-203ENST00000434376 ZNF609O15014 1411 aa18.39■□□□□ 0.53
SCARF1-203ENST00000434376 SLC9C2Q5TAH2 1124 aa18.39■□□□□ 0.53
SCARF1-203ENST00000434376 CCDC191Q8NCU4 936 aa18.39■□□□□ 0.53
SCARF1-203ENST00000434376 NCAPD2Q15021 1401 aa18.38■□□□□ 0.53
SCARF1-203ENST00000434376 HAUS7Q99871 368 aa18.38■□□□□ 0.53
SCARF1-203ENST00000434376 TTC12Q9H892 705 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-203ENST00000434376 ERVV-2B6SEH9 535 aa18.38■□□□□ 0.53
SCARF1-203ENST00000434376 HSPD1P10809 573 aaKnown RBP18.38■□□□□ 0.53
SCARF1-203ENST00000434376 CASP7P55210 303 aa18.38■□□□□ 0.53
SCARF1-203ENST00000434376 MIGA1Q8NAN2 632 aa18.38■□□□□ 0.53
SCARF1-203ENST00000434376 MTMR7Q9Y216 660 aa18.38■□□□□ 0.53
SCARF1-203ENST00000434376 CAMTA1Q9Y6Y1 1673 aa18.38■□□□□ 0.53
SCARF1-203ENST00000434376 PXDNLA1KZ92 1463 aa18.38■□□□□ 0.53
SCARF1-203ENST00000434376 ZKSCAN3Q9BRR0 538 aa18.38■□□□□ 0.53
SCARF1-203ENST00000434376 DACT1Q9NYF0 836 aa18.38■□□□□ 0.53
SCARF1-203ENST00000434376 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.38■□□□□ 0.53
SCARF1-203ENST00000434376 ISM2Q6H9L7 571 aa18.37■□□□□ 0.53
SCARF1-203ENST00000434376 MAST3O60307 1309 aa18.37■□□□□ 0.53
SCARF1-203ENST00000434376 PHKA1P46020 1223 aa18.37■□□□□ 0.53
SCARF1-203ENST00000434376 KRT85P78386 507 aa18.37■□□□□ 0.53
SCARF1-203ENST00000434376 CSPP1Q1MSJ5 1256 aa18.37■□□□□ 0.53
SCARF1-203ENST00000434376 DRC7Q8IY82 874 aa18.37■□□□□ 0.53
SCARF1-203ENST00000434376 KIAA2012Q0VF49 1180 aa18.36■□□□□ 0.53
SCARF1-203ENST00000434376 SCRN1Q12765 414 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms