RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 STK32BQ9NY57 414 aa10.58□□□□□ -0.72
NUP98-207ENST00000429801 SH3TC1Q8TE82 1336 aa10.58□□□□□ -0.72
NUP98-207ENST00000429801 UQCRHLA0A096LP55 91 aa10.57□□□□□ -0.72
NUP98-207ENST00000429801 UQCRHP07919 91 aa10.57□□□□□ -0.72
NUP98-207ENST00000429801 DEFB132Q7Z7B7 95 aa10.57□□□□□ -0.72
NUP98-207ENST00000429801 NYXQ9GZU5 481 aa10.57□□□□□ -0.72
NUP98-207ENST00000429801 PRDM16Q9HAZ2 1276 aa10.57□□□□□ -0.72
NUP98-207ENST00000429801 GEMIN8Q9NWZ8 242 aaKnown RBP10.57□□□□□ -0.72
NUP98-207ENST00000429801 IRS4O14654 1257 aaPredicted RBP10.57□□□□□ -0.72
NUP98-207ENST00000429801 FOXO4P98177 505 aa10.57□□□□□ -0.72
NUP98-207ENST00000429801 EPHA10Q5JZY3 1008 aa10.57□□□□□ -0.72
NUP98-207ENST00000429801 BICDL1Q6ZP65 573 aa10.57□□□□□ -0.72
NUP98-207ENST00000429801 FAM177BA6PVY3 158 aa10.56□□□□□ -0.72
NUP98-207ENST00000429801 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
NUP98-207ENST00000429801 SEMA3FQ13275 785 aa10.56□□□□□ -0.72
NUP98-207ENST00000429801 SLC15A2Q16348 729 aa10.56□□□□□ -0.72
NUP98-207ENST00000429801 HSP90AB4PQ58FF6 505 aa10.56□□□□□ -0.72
NUP98-207ENST00000429801 TRIM34Q9BYJ4 488 aa10.56□□□□□ -0.72
NUP98-207ENST00000429801 NTSR2O95665 410 aa10.56□□□□□ -0.72
NUP98-207ENST00000429801 GYS1P13807 737 aa10.56□□□□□ -0.72
NUP98-207ENST00000429801 TERF1P54274 439 aa10.56□□□□□ -0.72
NUP98-207ENST00000429801 LMBR1LQ6UX01 489 aa10.56□□□□□ -0.72
NUP98-207ENST00000429801 CARMIL3Q8ND23 1372 aa10.55□□□□□ -0.72
NUP98-207ENST00000429801 PDE8AO60658 829 aa10.55□□□□□ -0.72
NUP98-207ENST00000429801 SURF6O75683 361 aaKnown RBP10.55□□□□□ -0.72
NUP98-207ENST00000429801 NUCB1Q02818 461 aa10.55□□□□□ -0.72
NUP98-207ENST00000429801 TPTE2Q6XPS3 522 aa10.55□□□□□ -0.72
NUP98-207ENST00000429801 COL23A1Q86Y22 540 aaPredicted RBP10.55□□□□□ -0.72
NUP98-207ENST00000429801 PDZRN3Q9UPQ7 1066 aa10.55□□□□□ -0.72
NUP98-207ENST00000429801 PTMSP20962 102 aa10.55□□□□□ -0.72
NUP98-207ENST00000429801 ANKRD45Q5TZF3 282 aa10.55□□□□□ -0.72
NUP98-207ENST00000429801 NBPF5PQ86XG9 351 aaPredicted RBP10.55□□□□□ -0.72
NUP98-207ENST00000429801 GZF1Q9H116 711 aaPredicted RBP10.55□□□□□ -0.72
NUP98-207ENST00000429801 CHMP3Q9Y3E7 222 aa10.55□□□□□ -0.72
NUP98-207ENST00000429801 PNPLA7Q6ZV29 1317 aa10.54□□□□□ -0.72
NUP98-207ENST00000429801 RAB11FIP3O75154 756 aa10.54□□□□□ -0.72
NUP98-207ENST00000429801 CSF1RP07333 972 aa10.54□□□□□ -0.72
NUP98-207ENST00000429801 NFIXQ14938 502 aa10.54□□□□□ -0.72
NUP98-207ENST00000429801 CHD1LQ86WJ1 897 aa10.54□□□□□ -0.72
NUP98-207ENST00000429801 SYNE4Q8N205 404 aa10.54□□□□□ -0.72
NUP98-207ENST00000429801 NLGN1Q8N2Q7 840 aa10.54□□□□□ -0.72
NUP98-207ENST00000429801 EXOC6BQ9Y2D4 811 aa10.54□□□□□ -0.72
NUP98-207ENST00000429801 CAPN2P17655 700 aa10.54□□□□□ -0.72
NUP98-207ENST00000429801 CTSWP56202 376 aa10.54□□□□□ -0.72
NUP98-207ENST00000429801 NPHP1O15259 732 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 CCDC57Q2TAC2 916 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 NUTM1Q86Y26 1132 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 ERC1Q8IUD2 1116 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 BANK1Q8NDB2 785 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 YY1AP1Q9H869 796 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 COPRSQ9NQ92 184 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 COL24A1Q17RW2 1714 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 HCLS1P14317 486 aaPredicted RBP10.53□□□□□ -0.72
NUP98-207ENST00000429801 TM4SF1P30408 202 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 G3BP1Q13283 466 aaKnown RBP eCLIP10.53□□□□□ -0.721e-6■■■□□ 15.8
NUP98-207ENST00000429801 ATP2B3Q16720 1220 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 ERFEQ4G0M1 354 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 SLC10A5Q5PT55 438 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 TTLL11Q8NHH1 800 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 TRIM44Q96DX7 344 aaPredicted RBP10.53□□□□□ -0.72
NUP98-207ENST00000429801 LRRCC1Q9C099 1032 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 TUBGCP6Q96RT7 1819 aa10.53□□□□□ -0.72
NUP98-207ENST00000429801 APBB1O00213 710 aa10.52□□□□□ -0.72
NUP98-207ENST00000429801 RFX5P48382 616 aaPredicted RBP10.52□□□□□ -0.72
NUP98-207ENST00000429801 IFIT5Q13325 482 aaKnown RBP10.52□□□□□ -0.72
NUP98-207ENST00000429801 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.52□□□□□ -0.72
NUP98-207ENST00000429801 SKAP1Q86WV1 359 aa10.52□□□□□ -0.72
NUP98-207ENST00000429801 UPF1Q92900 1129 aaKnown RBP eCLIP10.52□□□□□ -0.723e-6■□□□□ 8.7
NUP98-207ENST00000429801 LNPKQ9C0E8 428 aa10.52□□□□□ -0.72
NUP98-207ENST00000429801 PTPN12Q05209 780 aaKnown RBP10.52□□□□□ -0.73
NUP98-207ENST00000429801 CCDC152Q4G0S7 254 aa10.52□□□□□ -0.73
NUP98-207ENST00000429801 CNBD1Q8NA66 436 aa10.52□□□□□ -0.73
NUP98-207ENST00000429801 KIF1BPQ96EK5 621 aa10.52□□□□□ -0.73
NUP98-207ENST00000429801 PA2G4Q9UQ80 394 aaKnown RBP10.52□□□□□ -0.73
NUP98-207ENST00000429801 QSER1Q2KHR3 1735 aa10.52□□□□□ -0.73
NUP98-207ENST00000429801 ANKRD18BA2A2Z9 1011 aa10.51□□□□□ -0.73
NUP98-207ENST00000429801 FAM161AQ3B820 660 aa10.51□□□□□ -0.73
NUP98-207ENST00000429801 ZNF526Q8TF50 670 aaPredicted RBP10.51□□□□□ -0.73
NUP98-207ENST00000429801 MYH3P11055 1940 aa10.51□□□□□ -0.73
NUP98-207ENST00000429801 SERPINB2P05120 415 aa10.51□□□□□ -0.73
NUP98-207ENST00000429801 CT47A1Q5JQC4 288 aaPredicted RBP10.51□□□□□ -0.73
NUP98-207ENST00000429801 RHPN1Q8TCX5 695 aa10.51□□□□□ -0.73
NUP98-207ENST00000429801 NLRP3Q96P20 1036 aa10.51□□□□□ -0.73
NUP98-207ENST00000429801 GREM2Q9H772 168 aa10.51□□□□□ -0.73
NUP98-207ENST00000429801 LAMB2P55268 1798 aa10.51□□□□□ -0.73
NUP98-207ENST00000429801 DYNC1I1O14576 645 aa10.5□□□□□ -0.73
NUP98-207ENST00000429801 ITGA6P23229 1130 aa10.5□□□□□ -0.73
NUP98-207ENST00000429801 ST5P78524 1137 aa10.5□□□□□ -0.73
NUP98-207ENST00000429801 KLHDC4Q8TBB5 520 aa10.5□□□□□ -0.73
NUP98-207ENST00000429801 CCDC85AQ96PX6 553 aaPredicted RBP10.5□□□□□ -0.73
NUP98-207ENST00000429801 SIL1Q9H173 461 aa10.5□□□□□ -0.73
NUP98-207ENST00000429801 DDX60Q8IY21 1712 aaKnown RBP10.5□□□□□ -0.73
NUP98-207ENST00000429801 POLRMTO00411 1230 aaKnown RBP10.5□□□□□ -0.73
NUP98-207ENST00000429801 SF3B3Q15393 1217 aaKnown RBP10.5□□□□□ -0.73
NUP98-207ENST00000429801 RTL9Q8NET4 1388 aa10.5□□□□□ -0.73
NUP98-207ENST00000429801 SMARCA5O60264 1052 aaPredicted RBP10.49□□□□□ -0.73
NUP98-207ENST00000429801 CIAO1O76071 339 aa10.49□□□□□ -0.73
NUP98-207ENST00000429801 MRE11P49959 708 aa10.49□□□□□ -0.73
NUP98-207ENST00000429801 PRR5LQ6MZQ0 368 aa10.49□□□□□ -0.73
NUP98-207ENST00000429801 PARP3Q9Y6F1 533 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms