RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 PI4K2BQ8TCG2 481 aa15.56■□□□□ 0.08
HMGB3P4-201ENST00000428776 PARP3Q9Y6F1 533 aa15.56■□□□□ 0.08
HMGB3P4-201ENST00000428776 COL4A1P02462 1669 aa15.56■□□□□ 0.08
HMGB3P4-201ENST00000428776 SDSP20132 328 aa15.55■□□□□ 0.08
HMGB3P4-201ENST00000428776 TSHZ3Q63HK5 1081 aa15.55■□□□□ 0.08
HMGB3P4-201ENST00000428776 DDX46Q7L014 1031 aaKnown RBP15.55■□□□□ 0.08
HMGB3P4-201ENST00000428776 A0A1B0GUL7 405 aa15.54■□□□□ 0.08
HMGB3P4-201ENST00000428776 PDE8BO95263 885 aa15.54■□□□□ 0.08
HMGB3P4-201ENST00000428776 MMP10P09238 476 aa15.54■□□□□ 0.08
HMGB3P4-201ENST00000428776 TIMM10P62072 90 aa15.54■□□□□ 0.08
HMGB3P4-201ENST00000428776 RPS8P62241 208 aaKnown RBP15.54■□□□□ 0.08
HMGB3P4-201ENST00000428776 CRY2Q49AN0 593 aa15.54■□□□□ 0.08
HMGB3P4-201ENST00000428776 VGLL2Q8N8G2 317 aa15.54■□□□□ 0.08
HMGB3P4-201ENST00000428776 NEUROD6Q96NK8 337 aa15.54■□□□□ 0.08
HMGB3P4-201ENST00000428776 BSDC1Q9NW68 430 aaPredicted RBP15.54■□□□□ 0.08
HMGB3P4-201ENST00000428776 TLR7Q9NYK1 1049 aaKnown RBP15.54■□□□□ 0.08
HMGB3P4-201ENST00000428776 DBNLQ9UJU6 430 aaKnown RBP15.54■□□□□ 0.08
HMGB3P4-201ENST00000428776 KLRG2A4D1S0 409 aaPredicted RBP15.53■□□□□ 0.08
HMGB3P4-201ENST00000428776 CDC45O75419 566 aa15.53■□□□□ 0.08
HMGB3P4-201ENST00000428776 ATP5JP18859 108 aa15.53■□□□□ 0.08
HMGB3P4-201ENST00000428776 ATP2B3Q16720 1220 aa15.53■□□□□ 0.08
HMGB3P4-201ENST00000428776 SLC16A10Q8TF71 515 aa15.53■□□□□ 0.08
HMGB3P4-201ENST00000428776 BRIP1Q9BX63 1249 aa15.53■□□□□ 0.08
HMGB3P4-201ENST00000428776 AKAP11Q9UKA4 1901 aa15.53■□□□□ 0.08
HMGB3P4-201ENST00000428776 EIF5BO60841 1220 aaKnown RBP15.52■□□□□ 0.08
HMGB3P4-201ENST00000428776 RPGRQ92834 1020 aaKnown RBP15.52■□□□□ 0.08
HMGB3P4-201ENST00000428776 UPF1Q92900 1129 aaKnown RBP eCLIP15.52■□□□□ 0.08
HMGB3P4-201ENST00000428776 DBNDD2Q9BQY9 259 aa15.52■□□□□ 0.08
HMGB3P4-201ENST00000428776 CACNA1SQ13698 1873 aa15.52■□□□□ 0.07
HMGB3P4-201ENST00000428776 MYH7P12883 1935 aa15.51■□□□□ 0.07
HMGB3P4-201ENST00000428776 TRIM6-TRIM34B2RNG4 842 aa15.51■□□□□ 0.07
HMGB3P4-201ENST00000428776 PUM3Q15397 648 aaKnown RBP15.51■□□□□ 0.07
HMGB3P4-201ENST00000428776 MSL1Q68DK7 614 aa15.51■□□□□ 0.07
HMGB3P4-201ENST00000428776 CASC1Q6TDU7 716 aa15.51■□□□□ 0.07
HMGB3P4-201ENST00000428776 CELF1Q92879 486 aaKnown RBP15.51■□□□□ 0.07
HMGB3P4-201ENST00000428776 RBM17Q96I25 401 aaKnown RBP15.51■□□□□ 0.07
HMGB3P4-201ENST00000428776 COL11A2P13942 1736 aaPredicted RBP15.51■□□□□ 0.07
HMGB3P4-201ENST00000428776 MYH13Q9UKX3 1938 aa15.51■□□□□ 0.07
HMGB3P4-201ENST00000428776 FGFR2P21802 821 aa15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 HOXA10P31260 410 aaPredicted RBP15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 PDE6BP35913 854 aa15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 CHRNDQ07001 517 aa15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 GRAPQ13588 217 aa15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 CCDC158Q5M9N0 1113 aa15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 GORABQ5T7V8 394 aa15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 TBC1D9Q6ZT07 1266 aa15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 CNTROBQ8N137 903 aa15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 GRAPLQ8TC17 118 aaPredicted RBP15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 LPIN2Q92539 896 aa15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 RILPL2Q969X0 211 aa15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 XAGE2Q96GT9 111 aa15.5■□□□□ 0.07
HMGB3P4-201ENST00000428776 LRRC37AA6NMS7 1700 aa15.49■□□□□ 0.07
HMGB3P4-201ENST00000428776 SLC5A1P13866 664 aa15.49■□□□□ 0.07
HMGB3P4-201ENST00000428776 HELBQ8NG08 1087 aaPredicted RBP15.49■□□□□ 0.07
HMGB3P4-201ENST00000428776 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.49■□□□□ 0.07
HMGB3P4-201ENST00000428776 CRAMP1Q96RY5 1269 aa15.49■□□□□ 0.07
HMGB3P4-201ENST00000428776 ANKRD2Q9GZV1 360 aa15.49■□□□□ 0.07
HMGB3P4-201ENST00000428776 MINPP1Q9UNW1 487 aa15.49■□□□□ 0.07
HMGB3P4-201ENST00000428776 KIF13BQ9NQT8 1826 aa15.48■□□□□ 0.07
HMGB3P4-201ENST00000428776 TAF5LO75529 589 aa15.48■□□□□ 0.07
HMGB3P4-201ENST00000428776 EVI5LQ96CN4 794 aa15.48■□□□□ 0.07
HMGB3P4-201ENST00000428776 DLEC1Q9Y238 1755 aa15.48■□□□□ 0.07
HMGB3P4-201ENST00000428776 BBOX1O75936 387 aa15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 SEC24BO95487 1268 aa15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 MAP4K4O95819 1239 aaPredicted RBP15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 IFIT1P09914 478 aaKnown RBP15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 ADORA1P30542 326 aa15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 UBE4AQ14139 1066 aa15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 TMC4Q7Z404 712 aa15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 ZNF512BQ96KM6 892 aaPredicted RBP15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 HAUS7Q99871 368 aa15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 PDGFDQ9GZP0 370 aaPredicted RBP15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 BOLA2Q9H3K6 86 aa15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 RBM19Q9Y4C8 960 aaKnown RBP15.47■□□□□ 0.07
HMGB3P4-201ENST00000428776 MYO5AQ9Y4I1 1855 aaKnown RBP15.46■□□□□ 0.07
HMGB3P4-201ENST00000428776 SRGNP10124 158 aa15.46■□□□□ 0.07
HMGB3P4-201ENST00000428776 NPR1P16066 1061 aa15.46■□□□□ 0.07
HMGB3P4-201ENST00000428776 TTC39AQ5SRH9 613 aa15.46■□□□□ 0.07
HMGB3P4-201ENST00000428776 UPF2Q9HAU5 1272 aaKnown RBP15.46■□□□□ 0.07
HMGB3P4-201ENST00000428776 CHMLP26374 656 aa15.45■□□□□ 0.06
HMGB3P4-201ENST00000428776 ALDH1B1P30837 517 aa15.45■□□□□ 0.06
HMGB3P4-201ENST00000428776 TICAM2Q86XR7 235 aa15.45■□□□□ 0.06
HMGB3P4-201ENST00000428776 LTBP1Q14766 1721 aa15.44■□□□□ 0.06
HMGB3P4-201ENST00000428776 HIP1O00291 1037 aa15.44■□□□□ 0.06
HMGB3P4-201ENST00000428776 UQCRFS1P1P0C7P4 283 aa15.44■□□□□ 0.06
HMGB3P4-201ENST00000428776 MASTLQ96GX5 879 aa15.44■□□□□ 0.06
HMGB3P4-201ENST00000428776 DOCK2Q92608 1830 aa15.44■□□□□ 0.06
HMGB3P4-201ENST00000428776 H0YIN7 160 aa15.43■□□□□ 0.06
HMGB3P4-201ENST00000428776 ARID4AP29374 1257 aaPredicted RBP15.43■□□□□ 0.06
HMGB3P4-201ENST00000428776 CCDC102BQ68D86 513 aa15.43■□□□□ 0.06
HMGB3P4-201ENST00000428776 DNAJC2Q99543 621 aaKnown RBP15.43■□□□□ 0.06
HMGB3P4-201ENST00000428776 RFX7Q2KHR2 1363 aa15.43■□□□□ 0.06
HMGB3P4-201ENST00000428776 KCNJ4P48050 445 aa15.42■□□□□ 0.06
HMGB3P4-201ENST00000428776 MFAP1P55081 439 aaKnown RBP15.42■□□□□ 0.06
HMGB3P4-201ENST00000428776 STYK1Q6J9G0 422 aa15.42■□□□□ 0.06
HMGB3P4-201ENST00000428776 C2CD5Q86YS7 1000 aa15.42■□□□□ 0.06
HMGB3P4-201ENST00000428776 FSD1Q9BTV5 496 aa15.42■□□□□ 0.06
HMGB3P4-201ENST00000428776 PAG1Q9NWQ8 432 aa15.42■□□□□ 0.06
HMGB3P4-201ENST00000428776 LEMD3Q9Y2U8 911 aa15.42■□□□□ 0.06
HMGB3P4-201ENST00000428776 SLX4Q8IY92 1834 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms