RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 GLIPR1L2Q4G1C9 344 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 DDX46Q7L014 1031 aaKnown RBP4.44□□□□□ -1.7
CCDC30-203ENST00000428554 FERMT3Q86UX7 667 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 ARPC5LQ9BPX5 153 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.44□□□□□ -1.7
CCDC30-203ENST00000428554 ANO2Q9NQ90 1003 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 RAB6BQ9NRW1 208 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 HOMER2Q9NSB8 354 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 GOLGA6AQ9NYA3 693 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 PKD2L1Q9P0L9 805 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 TBX3O15119 743 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 CBFA2T2O43439 604 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 TSPAN6O43657 245 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 SORBS3O60504 671 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 FOSP01100 380 aaPredicted RBP4.44□□□□□ -1.7
CCDC30-203ENST00000428554 FKBP5Q13451 457 aaPredicted RBP4.44□□□□□ -1.7
CCDC30-203ENST00000428554 MUC3BQ9H195 1237 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 LZTS1Q9Y250 596 aa4.44□□□□□ -1.7
CCDC30-203ENST00000428554 ALDH1A1P00352 501 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 MYL1P05976 194 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 ZNF211Q13398 564 aaPredicted RBP4.43□□□□□ -1.7
CCDC30-203ENST00000428554 CCDC184Q52MB2 194 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 AXDND1Q5T1B0 1012 aaPredicted RBP4.43□□□□□ -1.7
CCDC30-203ENST00000428554 ZNF697Q5TEC3 545 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 CKAP2LQ8IYA6 745 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 LSM14AQ8ND56 463 aaKnown RBP4.43□□□□□ -1.7
CCDC30-203ENST00000428554 CHST12Q9NRB3 414 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 KLF15Q9UIH9 416 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 BPNT1O95861 308 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 DHX9Q08211 1270 aaKnown RBP4.43□□□□□ -1.7
CCDC30-203ENST00000428554 NR5A1Q13285 461 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 ENOX2Q16206 610 aaKnown RBP4.43□□□□□ -1.7
CCDC30-203ENST00000428554 TBCELQ5QJ74 424 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 CHPFQ8IZ52 775 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 IFNL3Q8IZI9 196 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 CEP120Q8N960 986 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 IRX2Q9BZI1 471 aaPredicted RBP4.43□□□□□ -1.7
CCDC30-203ENST00000428554 TMX4Q9H1E5 349 aaPredicted RBP4.43□□□□□ -1.7
CCDC30-203ENST00000428554 ESF1Q9H501 851 aaKnown RBP4.43□□□□□ -1.7
CCDC30-203ENST00000428554 SRA1Q9HD15 236 aaKnown RBP4.43□□□□□ -1.7
CCDC30-203ENST00000428554 CNTN3Q9P232 1028 aa4.43□□□□□ -1.7
CCDC30-203ENST00000428554 M0R2N6 131 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 INHAP05111 366 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 KRT18P05783 430 aaKnown RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 ATF4P18848 351 aaPredicted RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 CASP2P42575 452 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 MASP1P48740 699 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 EPHB1P54762 984 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 EPHA4P54764 986 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 RACK1P63244 317 aaKnown RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 FKBP4Q02790 459 aaKnown RBP eCLIP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 PDE3BQ13370 1112 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 MTMR3Q13615 1198 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 CDC37Q16543 378 aaPredicted RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 INO80DQ53TQ3 878 aaPredicted RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 KDF1Q8NAX2 398 aaPredicted RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 NEUROD6Q96NK8 337 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 TSPAN10Q9H1Z9 355 aaPredicted RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 ZHX3Q9H4I2 956 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 DHX16O60231 1041 aaKnown RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 ABL1P00519 1130 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 NNTQ13423 1086 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 SIM2Q14190 667 aaPredicted RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 LAPTM4AQ15012 233 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 L1TD1Q5T7N2 865 aaKnown RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 ACBD5Q5T8D3 534 aaPredicted RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 TMC7Q7Z402 723 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 CITED4Q96RK1 184 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 RETREG1Q9H6L5 497 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 MRS2Q9HD23 443 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 USP3Q9Y6I4 520 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 J3QL48 77 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 KCNQ2O43526 872 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 CDC45O75419 566 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 RAVER1Q8IY67 606 aaKnown RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 TEX19Q8NA77 164 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 SCG3Q8WXD2 468 aaKnown RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 NOL7Q9UMY1 257 aaKnown RBP4.42□□□□□ -1.7
CCDC30-203ENST00000428554 SH3BP1Q9Y3L3 701 aa4.42□□□□□ -1.7
CCDC30-203ENST00000428554 IL2RAP01589 272 aa4.41□□□□□ -1.7
CCDC30-203ENST00000428554 SCP2P22307 547 aa4.41□□□□□ -1.7
CCDC30-203ENST00000428554 NAA30Q147X3 362 aaPredicted RBP4.41□□□□□ -1.7
CCDC30-203ENST00000428554 SYCP2LQ5T4T6 812 aa4.41□□□□□ -1.7
CCDC30-203ENST00000428554 USP48Q86UV5 1035 aa4.41□□□□□ -1.7
CCDC30-203ENST00000428554 GTF3C2Q8WUA4 911 aaPredicted RBP4.41□□□□□ -1.7
CCDC30-203ENST00000428554 TSR2Q969E8 191 aaKnown RBP4.41□□□□□ -1.7
CCDC30-203ENST00000428554 LGR6Q9HBX8 967 aa4.41□□□□□ -1.7
CCDC30-203ENST00000428554 EMILIN1Q9Y6C2 1016 aa4.41□□□□□ -1.7
CCDC30-203ENST00000428554 DNMT3AQ9Y6K1 912 aaPredicted RBP4.41□□□□□ -1.7
CCDC30-203ENST00000428554 WASLO00401 505 aaPredicted RBP4.41□□□□□ -1.7
CCDC30-203ENST00000428554 POLD1P28340 1107 aa4.41□□□□□ -1.7
CCDC30-203ENST00000428554 PPP2R5AQ15172 486 aa4.41□□□□□ -1.7
CCDC30-203ENST00000428554 BRDTQ58F21 947 aaPredicted RBP4.41□□□□□ -1.7
CCDC30-203ENST00000428554 GJC2Q5T442 439 aaPredicted RBP4.41□□□□□ -1.7
CCDC30-203ENST00000428554 ITPKCQ96DU7 683 aa4.41□□□□□ -1.7
CCDC30-203ENST00000428554 DUSP9Q99956 384 aaKnown RBP4.41□□□□□ -1.7
CCDC30-203ENST00000428554 CWC25Q9NXE8 425 aaPredicted RBP4.41□□□□□ -1.7
CCDC30-203ENST00000428554 SYNPO2Q9UMS6 1093 aa4.41□□□□□ -1.7
CCDC30-203ENST00000428554 PPP2R3BQ9Y5P8 575 aa4.41□□□□□ -1.7
CCDC30-203ENST00000428554 A0A1W2PRU2 124 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms