RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PNMA6EA0A0J9YXQ4 647 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 ZSCAN12O43309 604 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 ANKRD1Q15327 319 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 FOXR1Q6PIV2 292 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 ANKRD20A12PQ8NF67 263 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 ALDH8A1Q9H2A2 487 aaPredicted RBP18.67■□□□□ 0.58
C9orf3-206ENST00000428313 MRFAP1Q9Y605 127 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 POGZQ7Z3K3 1410 aa18.66■□□□□ 0.58
C9orf3-206ENST00000428313 MAP2K2P36507 400 aa18.66■□□□□ 0.58
C9orf3-206ENST00000428313 SATB1Q01826 763 aa18.66■□□□□ 0.58
C9orf3-206ENST00000428313 RESTQ13127 1097 aa18.66■□□□□ 0.58
C9orf3-206ENST00000428313 LARP1Q6PKG0 1096 aaKnown RBP18.66■□□□□ 0.58
C9orf3-206ENST00000428313 HDXQ7Z353 690 aa18.66■□□□□ 0.58
C9orf3-206ENST00000428313 XPO4Q9C0E2 1151 aaKnown RBP18.66■□□□□ 0.58
C9orf3-206ENST00000428313 EPC1Q9H2F5 836 aa18.66■□□□□ 0.58
C9orf3-206ENST00000428313 GOLGA6L9A6NEM1 432 aa18.66■□□□□ 0.58
C9orf3-206ENST00000428313 RAB11FIP3O75154 756 aa18.66■□□□□ 0.58
C9orf3-206ENST00000428313 SLC4A2P04920 1241 aa18.66■□□□□ 0.58
C9orf3-206ENST00000428313 EIF5P55010 431 aaKnown RBP18.66■□□□□ 0.58
C9orf3-206ENST00000428313 GNL2Q13823 731 aaKnown RBP18.66■□□□□ 0.58
C9orf3-206ENST00000428313 E2F4Q16254 413 aa18.66■□□□□ 0.58
C9orf3-206ENST00000428313 SUFUQ9UMX1 484 aa18.65■□□□□ 0.58
C9orf3-206ENST00000428313 SPG7Q9UQ90 795 aa18.65■□□□□ 0.58
C9orf3-206ENST00000428313 SOS1Q07889 1333 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-206ENST00000428313 POTEB2H3BUK9 544 aa18.65■□□□□ 0.58
C9orf3-206ENST00000428313 PPFIA4O75335 1185 aa18.65■□□□□ 0.58
C9orf3-206ENST00000428313 PRPF40BQ6NWY9 871 aaKnown RBP18.65■□□□□ 0.58
C9orf3-206ENST00000428313 LRRC31Q6UY01 552 aa18.65■□□□□ 0.58
C9orf3-206ENST00000428313 CCDC73Q6ZRK6 1079 aa18.65■□□□□ 0.58
C9orf3-206ENST00000428313 PDE11AQ9HCR9 933 aa18.65■□□□□ 0.58
C9orf3-206ENST00000428313 KINO60870 393 aaKnown RBP18.64■□□□□ 0.57
C9orf3-206ENST00000428313 DTNBO60941 627 aa18.64■□□□□ 0.57
C9orf3-206ENST00000428313 ZKSCAN1P17029 563 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-206ENST00000428313 USP5P45974 858 aa18.64■□□□□ 0.57
C9orf3-206ENST00000428313 SLC4A10Q6U841 1118 aa18.64■□□□□ 0.57
C9orf3-206ENST00000428313 CCAR1Q8IX12 1150 aaKnown RBP18.64■□□□□ 0.57
C9orf3-206ENST00000428313 IFNKQ9P0W0 207 aa18.64■□□□□ 0.57
C9orf3-206ENST00000428313 SIGLEC1Q9BZZ2 1709 aa18.64■□□□□ 0.57
C9orf3-206ENST00000428313 PSMA5P28066 241 aa18.63■□□□□ 0.57
C9orf3-206ENST00000428313 CCDC30Q5VVM6 783 aa18.63■□□□□ 0.57
C9orf3-206ENST00000428313 CWC27Q6UX04 472 aaKnown RBP18.63■□□□□ 0.57
C9orf3-206ENST00000428313 KCNG1Q9UIX4 513 aa18.63■□□□□ 0.57
C9orf3-206ENST00000428313 USP8P40818 1118 aa18.63■□□□□ 0.57
C9orf3-206ENST00000428313 DCTN1Q14203 1278 aa18.63■□□□□ 0.57
C9orf3-206ENST00000428313 NECTIN1Q15223 517 aa18.63■□□□□ 0.57
C9orf3-206ENST00000428313 FAM71BQ8TC56 605 aa18.63■□□□□ 0.57
C9orf3-206ENST00000428313 TACO1Q9BSH4 297 aaKnown RBP18.63■□□□□ 0.57
C9orf3-206ENST00000428313 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
C9orf3-206ENST00000428313 FAM160A1Q05DH4 1040 aa18.62■□□□□ 0.57
C9orf3-206ENST00000428313 BEND6Q5SZJ8 279 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-206ENST00000428313 ENGASEQ8NFI3 743 aa18.62■□□□□ 0.57
C9orf3-206ENST00000428313 DNAAF4Q8WXU2 420 aa18.62■□□□□ 0.57
C9orf3-206ENST00000428313 RCOR1Q9UKL0 485 aa18.62■□□□□ 0.57
C9orf3-206ENST00000428313 AKAP2Q9Y2D5 859 aa18.62■□□□□ 0.57
C9orf3-206ENST00000428313 VWA3AA6NCI4 1184 aa18.62■□□□□ 0.57
C9orf3-206ENST00000428313 MAP4K4O95819 1239 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-206ENST00000428313 TRDNQ13061 729 aa18.62■□□□□ 0.57
C9orf3-206ENST00000428313 DNAJC21Q5F1R6 531 aaKnown RBP18.62■□□□□ 0.57
C9orf3-206ENST00000428313 NUTM1Q86Y26 1132 aa18.62■□□□□ 0.57
C9orf3-206ENST00000428313 PTPRMP28827 1452 aa18.62■□□□□ 0.57
C9orf3-206ENST00000428313 ATP7BP35670 1465 aa18.62■□□□□ 0.57
C9orf3-206ENST00000428313 ERLIN1O75477 346 aa18.61■□□□□ 0.57
C9orf3-206ENST00000428313 IFIT2P09913 472 aaKnown RBP18.61■□□□□ 0.57
C9orf3-206ENST00000428313 TUBB4BP68371 445 aa18.61■□□□□ 0.57
C9orf3-206ENST00000428313 PTH1RQ03431 593 aa18.61■□□□□ 0.57
C9orf3-206ENST00000428313 EP400NLQ6ZTU2 488 aa18.61■□□□□ 0.57
C9orf3-206ENST00000428313 RAB21Q9UL25 225 aa18.61■□□□□ 0.57
C9orf3-206ENST00000428313 USP42Q9H9J4 1324 aaKnown RBP18.61■□□□□ 0.57
C9orf3-206ENST00000428313 F6X3S4 739 aa18.61■□□□□ 0.57
C9orf3-206ENST00000428313 ERC1Q8IUD2 1116 aa18.61■□□□□ 0.57
C9orf3-206ENST00000428313 GOLPH3LQ9H4A5 285 aa18.61■□□□□ 0.57
C9orf3-206ENST00000428313 FAN1Q9Y2M0 1017 aa18.61■□□□□ 0.57
C9orf3-206ENST00000428313 IL1RAPL2Q9NP60 686 aa18.6■□□□□ 0.57
C9orf3-206ENST00000428313 MAP3K5Q99683 1374 aa18.6■□□□□ 0.57
C9orf3-206ENST00000428313 SSH3Q8TE77 659 aa18.6■□□□□ 0.57
C9orf3-206ENST00000428313 ATL3Q6DD88 541 aa18.59■□□□□ 0.57
C9orf3-206ENST00000428313 ARHGAP6O43182 974 aa18.58■□□□□ 0.57
C9orf3-206ENST00000428313 TDO2P48775 406 aa18.58■□□□□ 0.57
C9orf3-206ENST00000428313 NBPF6Q5VWK0 638 aa18.58■□□□□ 0.57
C9orf3-206ENST00000428313 G2E3Q7L622 706 aa18.58■□□□□ 0.57
C9orf3-206ENST00000428313 DHX37Q8IY37 1157 aaKnown RBP18.58■□□□□ 0.57
C9orf3-206ENST00000428313 MSANTD4Q8NCY6 345 aa18.58■□□□□ 0.57
C9orf3-206ENST00000428313 KIFC2Q96AC6 838 aa18.58■□□□□ 0.57
C9orf3-206ENST00000428313 NBPF4Q96M43 638 aa18.58■□□□□ 0.57
C9orf3-206ENST00000428313 UTP14AQ9BVJ6 771 aaKnown RBP18.58■□□□□ 0.57
C9orf3-206ENST00000428313 L1RE1Q9UN81 338 aa18.58■□□□□ 0.57
C9orf3-206ENST00000428313 PPP2R2CQ9Y2T4 447 aa18.58■□□□□ 0.57
C9orf3-206ENST00000428313 MCM6Q14566 821 aa18.58■□□□□ 0.56
C9orf3-206ENST00000428313 HSP90B2PQ58FF3 399 aa18.58■□□□□ 0.56
C9orf3-206ENST00000428313 CREB3L3Q68CJ9 461 aa18.58■□□□□ 0.56
C9orf3-206ENST00000428313 MICALL1Q8N3F8 863 aa18.58■□□□□ 0.56
C9orf3-206ENST00000428313 CNNM3Q8NE01 707 aa18.58■□□□□ 0.56
C9orf3-206ENST00000428313 ACBD3Q9H3P7 528 aa18.58■□□□□ 0.56
C9orf3-206ENST00000428313 PXDNLA1KZ92 1463 aa18.57■□□□□ 0.56
C9orf3-206ENST00000428313 ERLIN2O94905 339 aa18.57■□□□□ 0.56
C9orf3-206ENST00000428313 ADD1P35611 737 aaKnown RBP18.57■□□□□ 0.56
C9orf3-206ENST00000428313 GNG11P61952 73 aa18.57■□□□□ 0.56
C9orf3-206ENST00000428313 RHPN1Q8TCX5 695 aa18.57■□□□□ 0.56
C9orf3-206ENST00000428313 CBFA2T2O43439 604 aa18.56■□□□□ 0.56
C9orf3-206ENST00000428313 SAFB2Q14151 953 aaKnown RBP eCLIP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms