RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 OTUD6BQ8N6M0 293 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 GOLGA1Q92805 767 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 CHMP4CQ96CF2 233 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 ZSCAN31Q96LW9 406 aaPredicted RBP6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 TRERF1Q96PN7 1200 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 SH3GL3Q99963 347 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 UBXN6Q9BZV1 441 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 CDHR5Q9HBB8 845 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 VEZTQ9HBM0 779 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 SH2B1Q9NRF2 756 aaPredicted RBP6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 TOMM22Q9NS69 142 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 ZNF446Q9NWS9 450 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 CPSF2Q9P2I0 782 aaKnown RBP6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 ORC3Q9UBD5 711 aaPredicted RBP6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 ADAM21Q9UKJ8 722 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 MYO6Q9UM54 1294 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 TRAK1Q9UPV9 953 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 ZDHHC9Q9Y397 364 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 FANCAO15360 1455 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 SHPRHQ149N8 1683 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 CEP152O94986 1710 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 ZBTB7CA1YPR0 619 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 BECN2A8MW95 431 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 POLR3GO15318 223 aaPredicted RBP6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 KIAA0754O94854 1291 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 NBPF7P0C2Y1 421 aaPredicted RBP6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 ARHGAP25P42331 645 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 PLA2G4AP47712 749 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 CDR1P51861 262 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 PSME1Q06323 249 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 TYRO3Q06418 890 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 DDR1Q08345 913 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 C11orf91Q3C1V1 193 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 B4GALNT4Q76KP1 1039 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 LUZP1Q86V48 1076 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 HOMER1Q86YM7 354 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 RPAP2Q8IXW5 612 aaPredicted RBP6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 C17orf53Q8N3J3 647 aaPredicted RBP6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 CERKQ8TCT0 537 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 BICD2Q8TD16 824 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 KCNV2Q8TDN2 545 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 ARHGEF1Q92888 912 aaKnown RBP6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 SMARCE1Q969G3 411 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 TRIM6Q9C030 488 aaPredicted RBP6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 SRCIN1Q9C0H9 1055 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 ZSCAN16Q9H4T2 348 aaPredicted RBP6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 SUDS3Q9H7L9 328 aaPredicted RBP6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 NPDC1Q9NQX5 325 aaPredicted RBP6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 BATF3Q9NR55 127 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 GNL3LQ9NVN8 582 aaKnown RBP6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 ZNF518AQ6AHZ1 1483 aa6.51□□□□□ -1.37
VTI1BP4-201ENST00000427516 MADDQ8WXG6 1647 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 MAST1Q9Y2H9 1570 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 SMAPO00193 183 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 EBAG9O00559 213 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 CHUKO15111 745 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 CBFA2T2O43439 604 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 STX6O43752 255 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 F13A1P00488 732 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 EZRP15311 586 aaKnown RBP6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 GCFC2P16383 781 aaKnown RBP6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 SFPQP23246 707 aaKnown RBP eCLIP6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 ZNF165P49910 485 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 ETF1P62495 437 aaKnown RBP6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 TRAF1Q13077 416 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 PLCB4Q15147 1175 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 STX1AQ16623 288 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 KIF4BQ2VIQ3 1234 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 CC2D1AQ6P1N0 951 aaPredicted RBP6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 MORC1Q86VD1 984 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 CEP57L1Q8IYX8 460 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 ZGPATQ8N5A5 531 aaKnown RBP6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 TCP11Q8WWU5 503 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 CABS1Q96KC9 395 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 STK31Q9BXU1 1019 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 VIPAS39Q9H9C1 493 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 WBP1LQ9NX94 342 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 KCNG1Q9UIX4 513 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 SMC3Q9UQE7 1217 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 AOX1Q06278 1338 aa6.5□□□□□ -1.37
VTI1BP4-201ENST00000427516 MAP3K5Q99683 1374 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 GOLGA6L7A0A1B0GV03 622 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 TRIM66O15016 1216 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 SLC8A1P32418 973 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 ELF1P32519 619 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 RWDD2BP57060 319 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 IFFO1Q0D2I5 559 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 DRP2Q13474 957 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 SETDB1Q15047 1291 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 PPP2R5AQ15172 486 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 CCDC38Q502W7 563 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 CCDC93Q567U6 631 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 GORABQ5T7V8 394 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 WWC2Q6AWC2 1192 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 RBM43Q6ZSC3 357 aaKnown RBP6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 TAX1BP1Q86VP1 789 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 APLFQ8IW19 511 aaPredicted RBP6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 TMEM57Q8N5G2 664 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 JARID2Q92833 1246 aaPredicted RBP6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 PUS7Q96PZ0 661 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms