RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 CCDC129Q6ZRS4 1044 aa8.82□□□□□ -1
LINC00649-203ENST00000427447 STAG1Q8WVM7 1258 aa8.82□□□□□ -1
LINC00649-203ENST00000427447 DISC1Q9NRI5 854 aa8.82□□□□□ -1
LINC00649-203ENST00000427447 XPOTO43592 962 aaKnown RBP8.81□□□□□ -1
LINC00649-203ENST00000427447 MBD2Q9UBB5 411 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 SESN1Q9Y6P5 492 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 GSTTP1A0A1W2PQM5 241 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 KRT6AP02538 564 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 KRT6BP04259 564 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 KRT6CP48668 564 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 CCDC15Q0P6D6 951 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 SPATA17Q96L03 361 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 RBM27Q9P2N5 1060 aaKnown RBP8.81□□□□□ -1
LINC00649-203ENST00000427447 PPP1R14BQ96C90 147 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 STMN3Q9NZ72 180 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 S100BP04271 92 aaPredicted RBP8.81□□□□□ -1
LINC00649-203ENST00000427447 UVSSAQ2YD98 709 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 BATF3Q9NR55 127 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 FRAT2O75474 233 aaPredicted RBP8.81□□□□□ -1
LINC00649-203ENST00000427447 ATP5DP30049 168 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 ABCF2Q9UG63 623 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 ZNF280DQ6N043 979 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 CABS1Q96KC9 395 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 CCDC85AQ96PX6 553 aaPredicted RBP8.81□□□□□ -1
LINC00649-203ENST00000427447 PFDN4Q9NQP4 134 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 FOXD4L1Q9NU39 408 aa8.81□□□□□ -1
LINC00649-203ENST00000427447 NDUFAB1O14561 156 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 CCDC25Q86WR0 208 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 FLCNQ8NFG4 579 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 WASHC2AQ641Q2 1341 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 TRAF5O00463 557 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 NBPF10Q6P3W6 841 aaKnown RBP8.8□□□□□ -1
LINC00649-203ENST00000427447 GATAD2AQ86YP4 633 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 ZNF653Q96CK0 615 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 SPAG5Q96R06 1193 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 CCDC77Q9BR77 488 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 VPS8Q8N3P4 1428 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 IGBP1P78318 339 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 SFSWAPQ12872 951 aaKnown RBP8.8□□□□□ -1
LINC00649-203ENST00000427447 NFXL1Q6ZNB6 911 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 DDX42Q86XP3 938 aaKnown RBP eCLIP8.8□□□□□ -1
LINC00649-203ENST00000427447 TLK1Q9UKI8 766 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 KIF15Q9NS87 1388 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 SLU7O95391 586 aaKnown RBP8.8□□□□□ -1
LINC00649-203ENST00000427447 SLC44A4Q53GD3 710 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 ZNF396Q96N95 335 aaPredicted RBP8.8□□□□□ -1
LINC00649-203ENST00000427447 MCF2LO15068 1137 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 DIAPH2O60879 1101 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 ERCC5P28715 1186 aaPredicted RBP8.8□□□□□ -1
LINC00649-203ENST00000427447 MCM4P33991 863 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 TCP11Q8WWU5 503 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 ZNF148Q9UQR1 794 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 OPHN1O60890 802 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 CCT6AP40227 531 aaKnown RBP8.8□□□□□ -1
LINC00649-203ENST00000427447 TUBB2AQ13885 445 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 MAATS1Q7Z4T9 603 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 FAM186BQ8IYM0 893 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 P3H4Q92791 437 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 TUBB2BQ9BVA1 445 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 BSDC1Q9NW68 430 aaPredicted RBP8.8□□□□□ -1
LINC00649-203ENST00000427447 CUL3Q13618 768 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 FNBP4Q8N3X1 1017 aaPredicted RBP8.8□□□□□ -1
LINC00649-203ENST00000427447 TMX1Q9H3N1 280 aa8.8□□□□□ -1
LINC00649-203ENST00000427447 PODNQ7Z5L7 613 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 AFAP1Q8N556 730 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 AFAP1L1Q8TED9 768 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 RAPGEF4Q8WZA2 1011 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 CWC27Q6UX04 472 aaKnown RBP8.79□□□□□ -1
LINC00649-203ENST00000427447 ST13P5Q8NFI4 369 aaPredicted RBP8.79□□□□□ -1
LINC00649-203ENST00000427447 UNC45AQ9H3U1 944 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 MAFGO15525 162 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 KIF22Q14807 665 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 EIF3DO15371 548 aaKnown RBP eCLIP8.79□□□□□ -1
LINC00649-203ENST00000427447 TNMDQ9H2S6 317 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 C4BPBP20851 252 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 SPA17Q15506 151 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 KRT82Q9NSB4 513 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 SUFUQ9UMX1 484 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 GUCY1B2O75343 617 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 FOSL1P15407 271 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 ST13P4Q8IZP2 240 aaPredicted RBP8.79□□□□□ -1
LINC00649-203ENST00000427447 MPHOSPH8Q99549 860 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 PRDM5Q9NQX1 630 aaPredicted RBP8.79□□□□□ -1
LINC00649-203ENST00000427447 A0A1W2PRG0 241 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 TUBA4AP68366 448 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 GRM1Q13255 1194 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 ZNF449Q6P9G9 518 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 CCHCR1Q8TD31 782 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 JAKMIP2Q96AA8 810 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 ANGPTL3Q9Y5C1 460 aa8.79□□□□□ -1
LINC00649-203ENST00000427447 RFWD2Q8NHY2 731 aa8.78□□□□□ -1
LINC00649-203ENST00000427447 DDX21Q9NR30 783 aaKnown RBP eCLIP8.78□□□□□ -1
LINC00649-203ENST00000427447 VPS18Q9P253 973 aa8.78□□□□□ -1
LINC00649-203ENST00000427447 FRMD3A2A2Y4 597 aa8.78□□□□□ -1
LINC00649-203ENST00000427447 UBL4BQ8N7F7 174 aa8.78□□□□□ -1
LINC00649-203ENST00000427447 PPP1R14CQ8TAE6 165 aa8.78□□□□□ -1
LINC00649-203ENST00000427447 EVI5O60447 810 aa8.78□□□□□ -1
LINC00649-203ENST00000427447 CTTNQ14247 550 aaKnown RBP8.78□□□□□ -1
LINC00649-203ENST00000427447 VPS36Q86VN1 386 aa8.78□□□□□ -1
LINC00649-203ENST00000427447 DCDC2Q9UHG0 476 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms