RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CCDC24Q8N4L8 307 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 CRAMP1Q96RY5 1269 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 SEC31BQ9NQW1 1179 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 STAP2Q9UGK3 403 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 COL24A1Q17RW2 1714 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 TUBGCP6Q96RT7 1819 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 H0YIN7 160 aa12.66□□□□□ -0.38
MDC1-205ENST00000425072 ERC2O15083 957 aa12.66□□□□□ -0.38
MDC1-205ENST00000425072 PDE8BO95263 885 aa12.66□□□□□ -0.38
MDC1-205ENST00000425072 PDE1AP54750 535 aa12.66□□□□□ -0.38
MDC1-205ENST00000425072 CRY2Q49AN0 593 aa12.66□□□□□ -0.38
MDC1-205ENST00000425072 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
MDC1-205ENST00000425072 AACSQ86V21 672 aa12.66□□□□□ -0.38
MDC1-205ENST00000425072 NEUROD6Q96NK8 337 aa12.66□□□□□ -0.38
MDC1-205ENST00000425072 PUS3Q9BZE2 481 aaKnown RBP12.66□□□□□ -0.38
MDC1-205ENST00000425072 ANKRD2Q9GZV1 360 aa12.66□□□□□ -0.38
MDC1-205ENST00000425072 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
MDC1-205ENST00000425072 TMX4Q9H1E5 349 aaPredicted RBP12.66□□□□□ -0.38
MDC1-205ENST00000425072 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
MDC1-205ENST00000425072 TTC41PQ6P2S7 1318 aa12.65□□□□□ -0.38
MDC1-205ENST00000425072 EIF5BO60841 1220 aaKnown RBP12.65□□□□□ -0.38
MDC1-205ENST00000425072 NPR1P16066 1061 aa12.65□□□□□ -0.38
MDC1-205ENST00000425072 MX1P20591 662 aa12.65□□□□□ -0.38
MDC1-205ENST00000425072 GRAPQ13588 217 aa12.65□□□□□ -0.38
MDC1-205ENST00000425072 R3HDM1Q15032 1099 aaKnown RBP12.65□□□□□ -0.38
MDC1-205ENST00000425072 TNNI3KQ59H18 835 aa12.65□□□□□ -0.38
MDC1-205ENST00000425072 GRAPLQ8TC17 118 aaPredicted RBP12.65□□□□□ -0.38
MDC1-205ENST00000425072 EAF2Q96CJ1 260 aaPredicted RBP12.65□□□□□ -0.38
MDC1-205ENST00000425072 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
MDC1-205ENST00000425072 FPGT-TNNI3KV9GXZ4 949 aa12.65□□□□□ -0.38
MDC1-205ENST00000425072 AOX1Q06278 1338 aa12.64□□□□□ -0.39
MDC1-205ENST00000425072 LAMB2P55268 1798 aa12.64□□□□□ -0.39
MDC1-205ENST00000425072 TIMM10P62072 90 aa12.64□□□□□ -0.39
MDC1-205ENST00000425072 CCDC158Q5M9N0 1113 aa12.64□□□□□ -0.39
MDC1-205ENST00000425072 GORABQ5T7V8 394 aa12.64□□□□□ -0.39
MDC1-205ENST00000425072 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
MDC1-205ENST00000425072 MASTLQ96GX5 879 aa12.64□□□□□ -0.39
MDC1-205ENST00000425072 ABCC12Q96J65 1359 aa12.64□□□□□ -0.39
MDC1-205ENST00000425072 GLRX3O76003 335 aaKnown RBP12.63□□□□□ -0.39
MDC1-205ENST00000425072 UBE4AQ14139 1066 aa12.63□□□□□ -0.39
MDC1-205ENST00000425072 BMP2KLQ5H9B9 411 aa12.63□□□□□ -0.39
MDC1-205ENST00000425072 LPIN2Q92539 896 aa12.63□□□□□ -0.39
MDC1-205ENST00000425072 CELF1Q92879 486 aaKnown RBP12.63□□□□□ -0.39
MDC1-205ENST00000425072 CCDC8Q9H0W5 538 aaPredicted RBP12.63□□□□□ -0.39
MDC1-205ENST00000425072 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
MDC1-205ENST00000425072 A0A1B0GUL7 405 aa12.62□□□□□ -0.39
MDC1-205ENST00000425072 IFIT1P09914 478 aaKnown RBP12.62□□□□□ -0.39
MDC1-205ENST00000425072 SRGNP10124 158 aa12.62□□□□□ -0.39
MDC1-205ENST00000425072 SLC5A1P13866 664 aa12.62□□□□□ -0.39
MDC1-205ENST00000425072 CHRNDQ07001 517 aa12.62□□□□□ -0.39
MDC1-205ENST00000425072 PUM3Q15397 648 aaKnown RBP12.62□□□□□ -0.39
MDC1-205ENST00000425072 ATP2B3Q16720 1220 aa12.62□□□□□ -0.39
MDC1-205ENST00000425072 STYK1Q6J9G0 422 aa12.62□□□□□ -0.39
MDC1-205ENST00000425072 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
MDC1-205ENST00000425072 SP8Q8IXZ3 490 aa12.62□□□□□ -0.39
MDC1-205ENST00000425072 CNKSR1Q969H4 720 aa12.62□□□□□ -0.39
MDC1-205ENST00000425072 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
MDC1-205ENST00000425072 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
MDC1-205ENST00000425072 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
MDC1-205ENST00000425072 ATP5JP18859 108 aa12.61□□□□□ -0.39
MDC1-205ENST00000425072 TTC22Q5TAA0 569 aa12.61□□□□□ -0.39
MDC1-205ENST00000425072 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
MDC1-205ENST00000425072 TICAM2Q86XR7 235 aa12.61□□□□□ -0.39
MDC1-205ENST00000425072 LEMD3Q9Y2U8 911 aa12.61□□□□□ -0.39
MDC1-205ENST00000425072 NRXN2Q9P2S2 1712 aa12.61□□□□□ -0.39
MDC1-205ENST00000425072 SALL3Q9BXA9 1300 aa12.61□□□□□ -0.39
MDC1-205ENST00000425072 KCNJ4P48050 445 aa12.6□□□□□ -0.39
MDC1-205ENST00000425072 TGFB2P61812 414 aa12.6□□□□□ -0.39
MDC1-205ENST00000425072 GRIPAP1Q4V328 841 aa12.6□□□□□ -0.39
MDC1-205ENST00000425072 VGLL2Q8N8G2 317 aa12.6□□□□□ -0.39
MDC1-205ENST00000425072 HELBQ8NG08 1087 aaPredicted RBP12.6□□□□□ -0.39
MDC1-205ENST00000425072 OTUD7AQ8TE49 926 aaPredicted RBP12.6□□□□□ -0.39
MDC1-205ENST00000425072 ZNF622Q969S3 477 aaKnown RBP eCLIP12.6□□□□□ -0.392e-11■□□□□ 11.1
MDC1-205ENST00000425072 XAGE2Q96GT9 111 aa12.6□□□□□ -0.39
MDC1-205ENST00000425072 CHD4Q14839 1912 aa12.6□□□□□ -0.39
MDC1-205ENST00000425072 TRIM6-TRIM34B2RNG4 842 aa12.59□□□□□ -0.39
MDC1-205ENST00000425072 TAF5LO75529 589 aa12.59□□□□□ -0.39
MDC1-205ENST00000425072 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
MDC1-205ENST00000425072 FGFR2P21802 821 aa12.59□□□□□ -0.39
MDC1-205ENST00000425072 ATP2B4P23634 1241 aa12.59□□□□□ -0.39
MDC1-205ENST00000425072 CAVIN4Q5BKX8 364 aa12.59□□□□□ -0.39
MDC1-205ENST00000425072 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
MDC1-205ENST00000425072 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
MDC1-205ENST00000425072 POTEDQ86YR6 584 aa12.59□□□□□ -0.39
MDC1-205ENST00000425072 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.59□□□□□ -0.39
MDC1-205ENST00000425072 GNL3LQ9NVN8 582 aaKnown RBP12.59□□□□□ -0.39
MDC1-205ENST00000425072 ANKIB1Q9P2G1 1089 aa12.59□□□□□ -0.39
MDC1-205ENST00000425072 DBNLQ9UJU6 430 aaKnown RBP12.59□□□□□ -0.39
MDC1-205ENST00000425072 TTC39AQ5SRH9 613 aa12.58□□□□□ -0.4
MDC1-205ENST00000425072 CNTROBQ8N137 903 aa12.58□□□□□ -0.4
MDC1-205ENST00000425072 PI4K2BQ8TCG2 481 aa12.58□□□□□ -0.4
MDC1-205ENST00000425072 ZNF512BQ96KM6 892 aaPredicted RBP12.58□□□□□ -0.4
MDC1-205ENST00000425072 DBNDD2Q9BQY9 259 aa12.58□□□□□ -0.4
MDC1-205ENST00000425072 SPON1Q9HCB6 807 aa12.58□□□□□ -0.4
MDC1-205ENST00000425072 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.4
MDC1-205ENST00000425072 CD2APQ9Y5K6 639 aa12.58□□□□□ -0.4
MDC1-205ENST00000425072 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.58□□□□□ -0.4
MDC1-205ENST00000425072 TAF1P21675 1872 aa12.57□□□□□ -0.4
MDC1-205ENST00000425072 PPEF1O14829 653 aaPredicted RBP12.57□□□□□ -0.4
MDC1-205ENST00000425072 VPS37DQ86XT2 251 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms