RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 TTLL7Q6ZT98 887 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 CCDC82Q8N4S0 544 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 KLRG1Q96E93 195 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 GBA2Q9HCG7 927 aaPredicted RBP4.25□□□□□ -1.73
TOP2A-201ENST00000423485 RGPD2P0DJD1 1756 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 ARHGEF5Q12774 1597 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 FRMD3A2A2Y4 597 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 DPYSL4O14531 572 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 INHBEP58166 350 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 ERC1Q8IUD2 1116 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 TTC16Q8NEE8 873 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 SYT17Q9BSW7 474 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 IPO8O15397 1037 aaKnown RBP4.25□□□□□ -1.73
TOP2A-201ENST00000423485 HMMRO75330 724 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 TRDNQ13061 729 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 PRRX2Q99811 253 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 PUF60Q9UHX1 559 aaKnown RBP4.25□□□□□ -1.73
TOP2A-201ENST00000423485 RIMS1Q86UR5 1692 aaKnown RBP4.25□□□□□ -1.73
TOP2A-201ENST00000423485 NWD1Q149M9 1564 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 TNNT3P45378 269 aaPredicted RBP4.24□□□□□ -1.73
TOP2A-201ENST00000423485 G3BP1Q13283 466 aaKnown RBP eCLIP4.24□□□□□ -1.738e-7■■□□□ 11.8
TOP2A-201ENST00000423485 PPP4R3CPQ6ZMV5 832 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 ELMOD1Q8N336 334 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 CAPNS2Q96L46 248 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 GCNAQ96QF7 691 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 SSH2Q76I76 1423 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 DDX60Q8IY21 1712 aaKnown RBP4.24□□□□□ -1.73
TOP2A-201ENST00000423485 IQSEC2Q5JU85 1478 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 ABCC1P33527 1531 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 PTPDC1A2A3K4 754 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 FOSL2P15408 326 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 CCDC158Q5M9N0 1113 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 SLC4A10Q6U841 1118 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 PRAG1Q86YV5 1406 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 HELBQ8NG08 1087 aaPredicted RBP4.24□□□□□ -1.73
TOP2A-201ENST00000423485 SALL3Q9BXA9 1300 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 TTC30AQ86WT1 665 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 RPUSD2Q8IZ73 545 aaKnown RBP4.24□□□□□ -1.73
TOP2A-201ENST00000423485 CNTROBQ8N137 903 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 RNF208Q9H0X6 261 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 PRKRIP1Q9H875 184 aaPredicted RBP4.24□□□□□ -1.73
TOP2A-201ENST00000423485 F8W031 263 aaPredicted RBP4.24□□□□□ -1.73
TOP2A-201ENST00000423485 CCER2I3L3R5 266 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 PRMT2P55345 433 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 FAM182BQ5T319 152 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 MASTLQ96GX5 879 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 PAGR1Q9BTK6 254 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 ZHX3Q9H4I2 956 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 TSPYL4Q9UJ04 414 aa4.24□□□□□ -1.73
TOP2A-201ENST00000423485 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 NCAM2O15394 837 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 PRPF38BQ5VTL8 546 aaKnown RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 FBXW10Q5XX13 1052 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 C12orf50Q8NA57 414 aaPredicted RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 ABHD8Q96I13 439 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 NACAP1Q9BZK3 213 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.23□□□□□ -1.731e-14■□□□□ 10.8
TOP2A-201ENST00000423485 FOXD4L1Q9NU39 408 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 ORC3Q9UBD5 711 aaPredicted RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 SEPT3Q9UH03 358 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 MTMR7Q9Y216 660 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 ERVK-7P63135 1459 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 TULP4Q9NRJ4 1543 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 BTBD11A6QL63 1104 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 RAG1P15918 1043 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 NPR1P16066 1061 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 DZIP3Q86Y13 1208 aaKnown RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 NFATC2IPQ8NCF5 419 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 ATOH1Q92858 354 aaPredicted RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 PRDM10Q9NQV6 1147 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 USP18Q9UMW8 372 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 HECW2Q9P2P5 1572 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 ADAMTSL3P82987 1691 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 ZMYND10O75800 440 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 SLC28A3Q9HAS3 691 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 AAASQ9NRG9 546 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 ABCC3O15438 1527 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 NFX1Q12986 1120 aaKnown RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 TTC39AQ5SRH9 613 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 FASTKD5Q7L8L6 764 aaKnown RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 NEUROD6Q96NK8 337 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 ARHGAP9Q9BRR9 750 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 KTN1Q86UP2 1357 aaKnown RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 GADD45BO75293 160 aaPredicted RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 VAMP4O75379 141 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 UFL1O94874 794 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 FARP2O94887 1054 aaPredicted RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 SLC5A1P13866 664 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 PLCG2P16885 1265 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 KCTD2Q14681 263 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 RAB30Q15771 203 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 CPLX2Q6PUV4 134 aaKnown RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 CCDC47Q96A33 483 aaKnown RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 TCHPQ9BT92 498 aa4.23□□□□□ -1.73
TOP2A-201ENST00000423485 TROQ12816 1431 aaPredicted RBP4.23□□□□□ -1.73
TOP2A-201ENST00000423485 CAPN9O14815 690 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 CACNB1Q02641 598 aaPredicted RBP4.22□□□□□ -1.73
TOP2A-201ENST00000423485 TMEM132EQ6IEE7 984 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 GTF3C2Q8WUA4 911 aaPredicted RBP4.22□□□□□ -1.73
TOP2A-201ENST00000423485 LRP2BPQ9P2M1 347 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms